RNA–Protein interactions for RNA: ENST00000442447.5

RBM39-215, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-215ENST00000442447 C1orf112Q9NSG2 853 aa18.12■□□□□ 0.49
RBM39-215ENST00000442447 SUCLA2Q9P2R7 463 aaPredicted RBP18.12■□□□□ 0.49
RBM39-215ENST00000442447 PRRC2BQ5JSZ5 2229 aaKnown RBP18.12■□□□□ 0.49
RBM39-215ENST00000442447 POTEMA6NI47 508 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 ZBTB39O15060 712 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 CSDE1O75534 798 aaKnown RBP18.11■□□□□ 0.49
RBM39-215ENST00000442447 SLITRK3O94933 977 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 LINC00271P0C7V0 271 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 FGFR4P22455 802 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 CTNNB1P35222 781 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 GATMP50440 423 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 POLGP54098 1239 aaPredicted RBP18.11■□□□□ 0.49
RBM39-215ENST00000442447 DSC3Q14574 896 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 PAN2Q504Q3 1202 aaKnown RBP18.11■□□□□ 0.49
RBM39-215ENST00000442447 TTC38Q5R3I4 469 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 FAM43BQ6ZT52 329 aaPredicted RBP18.11■□□□□ 0.49
RBM39-215ENST00000442447 SLC24A5Q71RS6 500 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 RHPN2Q8IUC4 686 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 SLC7A3Q8WY07 619 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 JPH2Q9BR39 696 aaPredicted RBP18.11■□□□□ 0.49
RBM39-215ENST00000442447 BMP2KQ9NSY1 1161 aaPredicted RBP18.11■□□□□ 0.49
RBM39-215ENST00000442447 THEGQ9P2T0 379 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 PCDHB7Q9Y5E2 793 aa18.11■□□□□ 0.49
RBM39-215ENST00000442447 A0A087WZ62 844 aa18.1■□□□□ 0.49
RBM39-215ENST00000442447 C9IYK1 514 aa18.1■□□□□ 0.49
RBM39-215ENST00000442447 MCM2P49736 904 aa18.1■□□□□ 0.49
RBM39-215ENST00000442447 XKR9Q5GH70 373 aa18.1■□□□□ 0.49
RBM39-215ENST00000442447 OTUD6AQ7L8S5 288 aa18.1■□□□□ 0.49
RBM39-215ENST00000442447 KSR1Q8IVT5 923 aa18.1■□□□□ 0.49
RBM39-215ENST00000442447 CMTR2Q8IYT2 770 aaKnown RBP18.1■□□□□ 0.49
RBM39-215ENST00000442447 NEK9Q8TD19 979 aa18.1■□□□□ 0.49
RBM39-215ENST00000442447 NLRP4Q96MN2 994 aa18.1■□□□□ 0.49
RBM39-215ENST00000442447 HSD17B14Q9BPX1 270 aa18.1■□□□□ 0.49
RBM39-215ENST00000442447 FDXACB1Q9BRP7 624 aaPredicted RBP18.1■□□□□ 0.49
RBM39-215ENST00000442447 GCOM2Q9BZD3 368 aaPredicted RBP18.1■□□□□ 0.49
RBM39-215ENST00000442447 DHX33Q9H6R0 707 aaKnown RBP18.1■□□□□ 0.49
RBM39-215ENST00000442447 LMCD1Q9NZU5 365 aa18.1■□□□□ 0.49
RBM39-215ENST00000442447 KIF3AQ9Y496 699 aa18.1■□□□□ 0.49
RBM39-215ENST00000442447 PPME1Q9Y570 386 aa18.1■□□□□ 0.49
RBM39-215ENST00000442447 MRPL42Q9Y6G3 142 aaKnown RBP18.1■□□□□ 0.49
RBM39-215ENST00000442447 NLRC5Q86WI3 1866 aa18.09■□□□□ 0.49
RBM39-215ENST00000442447 H3BNC9 293 aa18.09■□□□□ 0.49
RBM39-215ENST00000442447 DLL1O00548 723 aa18.09■□□□□ 0.49
RBM39-215ENST00000442447 OR52Z1P0C646 297 aa18.09■□□□□ 0.49
RBM39-215ENST00000442447 U2AF2P26368 475 aaKnown RBP eCLIP18.09■□□□□ 0.492e-64■■■□□ 14.9
RBM39-215ENST00000442447 RFC5P40937 340 aa18.09■□□□□ 0.49
RBM39-215ENST00000442447 CDC42EP1Q00587 391 aa18.09■□□□□ 0.49
RBM39-215ENST00000442447 ORC2Q13416 577 aaPredicted RBP18.09■□□□□ 0.49
RBM39-215ENST00000442447 GPM6BQ13491 265 aa18.09■□□□□ 0.49
RBM39-215ENST00000442447 NBR1Q14596 966 aa18.09■□□□□ 0.49
RBM39-215ENST00000442447 CLP1Q92989 425 aaKnown RBP18.09■□□□□ 0.49
RBM39-215ENST00000442447 TMEM143Q96AN5 459 aa18.09■□□□□ 0.49
RBM39-215ENST00000442447 NOL7Q9UMY1 257 aaKnown RBP18.09■□□□□ 0.49
RBM39-215ENST00000442447 RALGAPA2Q2PPJ7 1873 aa18.09■□□□□ 0.49
RBM39-215ENST00000442447 LYPLA2O95372 231 aa18.08■□□□□ 0.48
RBM39-215ENST00000442447 ZSCAN20P17040 1043 aaPredicted RBP18.08■□□□□ 0.48
RBM39-215ENST00000442447 GJB2P29033 226 aa18.08■□□□□ 0.48
RBM39-215ENST00000442447 BMPR1AP36894 532 aa18.08■□□□□ 0.48
RBM39-215ENST00000442447 TECP42680 631 aa18.08■□□□□ 0.48
RBM39-215ENST00000442447 TRAPPC10P48553 1259 aa18.08■□□□□ 0.48
RBM39-215ENST00000442447 EMC2Q15006 297 aa18.08■□□□□ 0.48
RBM39-215ENST00000442447 FAM102BQ5T8I3 360 aa18.08■□□□□ 0.48
RBM39-215ENST00000442447 ZNF410Q86VK4 478 aa18.08■□□□□ 0.48
RBM39-215ENST00000442447 EXOC8Q8IYI6 725 aa18.08■□□□□ 0.48
RBM39-215ENST00000442447 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
RBM39-215ENST00000442447 RWDD3Q9Y3V2 267 aa18.08■□□□□ 0.48
RBM39-215ENST00000442447 COL4A3BPQ9Y5P4 624 aa18.08■□□□□ 0.48
RBM39-215ENST00000442447 C5orf67F2Z3F1 127 aa18.07■□□□□ 0.48
RBM39-215ENST00000442447 FGFR1P11362 822 aa18.07■□□□□ 0.48
RBM39-215ENST00000442447 FAM189BP81408 668 aa18.07■□□□□ 0.48
RBM39-215ENST00000442447 PTPROQ16827 1216 aa18.07■□□□□ 0.48
RBM39-215ENST00000442447 MCTP1Q6DN14 999 aa18.07■□□□□ 0.48
RBM39-215ENST00000442447 ATXN2LQ8WWM7 1075 aaKnown RBP18.07■□□□□ 0.48
RBM39-215ENST00000442447 PSPC1Q8WXF1 523 aaKnown RBP18.07■□□□□ 0.48
RBM39-215ENST00000442447 MRPL38Q96DV4 380 aaKnown RBP18.07■□□□□ 0.48
RBM39-215ENST00000442447 MTRQ99707 1265 aa18.07■□□□□ 0.48
RBM39-215ENST00000442447 C11orf84Q9BUA3 381 aaPredicted RBP18.07■□□□□ 0.48
RBM39-215ENST00000442447 COL25A1Q9BXS0 654 aaPredicted RBP18.07■□□□□ 0.48
RBM39-215ENST00000442447 BACH2Q9BYV9 841 aa18.07■□□□□ 0.48
RBM39-215ENST00000442447 ATP6V0A4Q9HBG4 840 aa18.07■□□□□ 0.48
RBM39-215ENST00000442447 TMEM161AQ9NX61 479 aa18.07■□□□□ 0.48
RBM39-215ENST00000442447 ARID2Q68CP9 1835 aa18.07■□□□□ 0.48
RBM39-215ENST00000442447 A0A087WWV3 80 aa18.06■□□□□ 0.48
RBM39-215ENST00000442447 TBKBP1A7MCY6 615 aa18.06■□□□□ 0.48
RBM39-215ENST00000442447 GAS2O43903 313 aaKnown RBP18.06■□□□□ 0.48
RBM39-215ENST00000442447 RB1P06400 928 aa18.06■□□□□ 0.48
RBM39-215ENST00000442447 SFPQP23246 707 aaKnown RBP eCLIP18.06■□□□□ 0.48
RBM39-215ENST00000442447 TOB1P50616 345 aaPredicted RBP18.06■□□□□ 0.48
RBM39-215ENST00000442447 PIGOQ8TEQ8 1089 aa18.06■□□□□ 0.48
RBM39-215ENST00000442447 TCP11Q8WWU5 503 aa18.06■□□□□ 0.48
RBM39-215ENST00000442447 PRPF31Q8WWY3 499 aaKnown RBP18.06■□□□□ 0.48
RBM39-215ENST00000442447 CCDC43Q96MW1 224 aaKnown RBP18.06■□□□□ 0.48
RBM39-215ENST00000442447 ELAC1Q9H777 363 aaKnown RBP18.06■□□□□ 0.48
RBM39-215ENST00000442447 XPNPEP1Q9NQW7 623 aa18.06■□□□□ 0.48
RBM39-215ENST00000442447 ANKEF1Q9NU02 776 aa18.06■□□□□ 0.48
RBM39-215ENST00000442447 SMC3Q9UQE7 1217 aa18.06■□□□□ 0.48
RBM39-215ENST00000442447 MED24O75448 989 aa18.05■□□□□ 0.48
RBM39-215ENST00000442447 SRGAP2CP0DJJ0 459 aa18.05■□□□□ 0.48
RBM39-215ENST00000442447 SPATA31C1P0DKV0 1188 aa18.05■□□□□ 0.48
RBM39-215ENST00000442447 RARRES1P49788 294 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 195.1 ms