RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 PEAK1Q9H792 1746 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 A0A0G2JPF8 293 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 TRIM75PA6NK02 468 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 HNRNPCL3B7ZW38 293 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 SPTLC1O15269 473 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 HNRNPCL4P0DMR1 293 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 ATP1A3P13637 1013 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 PLCB3Q01970 1234 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 NR5A1Q13285 461 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 TEAD4Q15561 434 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 RAB12Q6IQ22 244 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 ZNF845Q96IR2 970 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-206ENST00000441438 TMEM237Q96Q45 408 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
SYNE2-206ENST00000441438 MALT1Q9UDY8 824 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 KCNH4Q9UQ05 1017 aa11.48□□□□□ -0.57
SYNE2-206ENST00000441438 ZNF3P17036 446 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 NRLP54845 237 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 ZBTB16Q05516 673 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 LRRFIP1Q32MZ4 808 aaKnown RBP11.47□□□□□ -0.57
SYNE2-206ENST00000441438 MAP4K3Q8IVH8 894 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 PPP1R14BQ96C90 147 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 SEC16BQ96JE7 1060 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 EHD1Q9H4M9 534 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 GGA3Q9NZ52 723 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 TMED5Q9Y3A6 229 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 AATKQ6ZMQ8 1374 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 LTN1O94822 1766 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 STMND1H3BQB6 276 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 GPR182O15218 404 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 HSD3B1P14060 373 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 GRIK1P39086 918 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 IFRD2Q12894 506 aaPredicted RBP11.47□□□□□ -0.57
SYNE2-206ENST00000441438 C5orf22Q49AR2 442 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 FBXO27Q8NI29 283 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 CDKL2Q92772 493 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 UPF1Q92900 1129 aaKnown RBP eCLIP11.47□□□□□ -0.57
SYNE2-206ENST00000441438 FAM167AQ96KS9 214 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 RUFY1Q96T51 708 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 RSAD1Q9HA92 442 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 PDLIM7Q9NR12 457 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 ADGRE2Q9UHX3 823 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 KIAA1257Q9ULG3 409 aa11.47□□□□□ -0.57
SYNE2-206ENST00000441438 NDUFAB1O14561 156 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 ABLIM1O14639 778 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 LSM1O15116 133 aaKnown RBP11.46□□□□□ -0.57
SYNE2-206ENST00000441438 NDUFB5O43674 189 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 GRIN3BO60391 1043 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 TROVE2P10155 538 aaKnown RBP eCLIP11.46□□□□□ -0.57
SYNE2-206ENST00000441438 BASP1P80723 227 aaKnown RBP11.46□□□□□ -0.57
SYNE2-206ENST00000441438 SNX1Q13596 522 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 GBX1Q14549 363 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 CBX2Q14781 532 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-206ENST00000441438 SKOR2Q2VWA4 1001 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-206ENST00000441438 ZNF792Q3KQV3 632 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 HEATR6Q6AI08 1181 aaKnown RBP11.46□□□□□ -0.57
SYNE2-206ENST00000441438 NOSTRINQ8IVI9 506 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 ANKRD53Q8N9V6 530 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 OSGEPQ9NPF4 335 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 FRMPD2Q68DX3 1309 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-206ENST00000441438 IBTKQ9P2D0 1353 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-206ENST00000441438 GOLGA8AA7E2F4 631 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 USP1O94782 785 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 POP4O95707 220 aaKnown RBP11.46□□□□□ -0.57
SYNE2-206ENST00000441438 PRKAR1BP31321 381 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 TUBA3CQ13748 450 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 STK11Q15831 433 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 IFFO2Q5TF58 517 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 THOC7Q6I9Y2 204 aaKnown RBP11.46□□□□□ -0.57
SYNE2-206ENST00000441438 MICALCLQ6ZW33 695 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 EFCAB3Q8N7B9 438 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 FAM81AQ8TBF8 368 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 LRRN4Q8WUT4 740 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 MTMR12Q9C0I1 747 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 ATRNO75882 1429 aa11.46□□□□□ -0.57
SYNE2-206ENST00000441438 TISP43B9A030 160 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 B9A039 149 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 SGK1O00141 431 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 MGEA5O60502 916 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 APOA4P06727 396 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 SOX5P35711 763 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 DR1Q01658 176 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 CXorf57Q6NSI4 855 aaKnown RBP11.46□□□□□ -0.58
SYNE2-206ENST00000441438 MYCT1Q8N699 235 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 ARRDC4Q8NCT1 418 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 WHAMMQ8TF30 809 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 CATSPER2Q96P56 530 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 TRERF1Q96PN7 1200 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 PIGSQ96S52 555 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 KIAA1683Q9H0B3 1180 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 SERHL2Q9H4I8 314 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 EFR3BQ9Y2G0 817 aa11.46□□□□□ -0.58
SYNE2-206ENST00000441438 DDX3YO15523 660 aaKnown RBP11.45□□□□□ -0.58
SYNE2-206ENST00000441438 MAFO75444 373 aaPredicted RBP11.45□□□□□ -0.58
SYNE2-206ENST00000441438 RTN3O95197 1032 aaPredicted RBP11.45□□□□□ -0.58
SYNE2-206ENST00000441438 TBC1D8O95759 1140 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 GSK3AP49840 483 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 CDC16Q13042 620 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 NCOA4Q13772 614 aa11.45□□□□□ -0.58
SYNE2-206ENST00000441438 KCNB1Q14721 858 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms