RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 EIF4HQ15056 248 aaKnown RBP6.64□□□□□ -1.35
PFDN4-202ENST00000441080 UGT8Q16880 541 aa6.64□□□□□ -1.35
PFDN4-202ENST00000441080 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.64□□□□□ -1.35
PFDN4-202ENST00000441080 ABCB5Q2M3G0 1257 aa6.64□□□□□ -1.35
PFDN4-202ENST00000441080 Q6ZUG5 572 aa6.64□□□□□ -1.35
PFDN4-202ENST00000441080 BMP8AQ7Z5Y6 402 aa6.64□□□□□ -1.35
PFDN4-202ENST00000441080 C1QL4Q86Z23 238 aa6.64□□□□□ -1.35
PFDN4-202ENST00000441080 REXO1L1PQ8IX06 675 aa6.64□□□□□ -1.35
PFDN4-202ENST00000441080 EAF2Q96CJ1 260 aaPredicted RBP6.64□□□□□ -1.35
PFDN4-202ENST00000441080 NOL10Q9BSC4 688 aaKnown RBP6.64□□□□□ -1.35
PFDN4-202ENST00000441080 SAE1Q9UBE0 346 aaPredicted RBP6.64□□□□□ -1.35
PFDN4-202ENST00000441080 MAGEL2Q9UJ55 1249 aa6.64□□□□□ -1.35
PFDN4-202ENST00000441080 NUMBLQ9Y6R0 609 aa6.64□□□□□ -1.35
PFDN4-202ENST00000441080 A0A0A6YYJ9 748 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 C9orf118A6NHY6 69 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 GABRDO14764 452 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 MT-CO1P00395 513 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 LPLP06858 475 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 MYBL2P10244 700 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 STAT5BP51692 787 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 PITRM1Q5JRX3 1037 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 AMOTL1Q8IY63 956 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 CBARPQ8N350 705 aaPredicted RBP6.63□□□□□ -1.35
PFDN4-202ENST00000441080 KLHL36Q8N4N3 616 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 CDYL2Q8N8U2 506 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 AJUBAQ96IF1 538 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 LCORQ96JN0 433 aaPredicted RBP6.63□□□□□ -1.35
PFDN4-202ENST00000441080 HIST1H2AHQ96KK5 128 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 HIST1H2AJQ99878 128 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 KATNBL1Q9H079 304 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 CCM2LQ9NUG4 571 aaPredicted RBP6.63□□□□□ -1.35
PFDN4-202ENST00000441080 POLR3BQ9NW08 1133 aaPredicted RBP6.63□□□□□ -1.35
PFDN4-202ENST00000441080 SYNPO2Q9UMS6 1093 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 USP18Q9UMW8 372 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 EDARQ9UNE0 448 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 PCDHB6Q9Y5E3 794 aa6.63□□□□□ -1.35
PFDN4-202ENST00000441080 H2AFYO75367 372 aaKnown RBP6.62□□□□□ -1.35
PFDN4-202ENST00000441080 GPR3P46089 330 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 KCNC1P48547 511 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 GJA9P57773 515 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 PPARAQ07869 468 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 INAVAQ3KP66 663 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 SP8Q8IXZ3 490 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 RTKN2Q8IZC4 609 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 DYDC2Q96IM9 177 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 RAX2Q96IS3 184 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 ORAI2Q96SN7 254 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 CARD11Q9BXL7 1154 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 QRSL1Q9H0R6 528 aaKnown RBP6.62□□□□□ -1.35
PFDN4-202ENST00000441080 KCTD10Q9H3F6 313 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 LUC7LQ9NQ29 371 aaKnown RBP6.62□□□□□ -1.35
PFDN4-202ENST00000441080 ADAM29Q9UKF5 820 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 TMPRSS11EQ9UL52 423 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 ZDHHC9Q9Y397 364 aa6.62□□□□□ -1.35
PFDN4-202ENST00000441080 SHTN1A0MZ66 631 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 MROH6A6NGR9 719 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 CFBP00751 764 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 ZSCAN22P10073 491 aaPredicted RBP6.61□□□□□ -1.35
PFDN4-202ENST00000441080 CSF2RBP32927 897 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 ANTXR2P58335 489 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 TRIM25Q14258 630 aaKnown RBP6.61□□□□□ -1.35
PFDN4-202ENST00000441080 USP10Q14694 798 aaKnown RBP6.61□□□□□ -1.35
PFDN4-202ENST00000441080 PLEKHG6Q3KR16 790 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 PGM2L1Q6PCE3 622 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 GPR155Q7Z3F1 870 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 FAM124AQ86V42 546 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 BCL6BQ8N143 479 aaPredicted RBP6.61□□□□□ -1.35
PFDN4-202ENST00000441080 C1orf162Q8NEQ5 155 aaPredicted RBP6.61□□□□□ -1.35
PFDN4-202ENST00000441080 OR14C36Q8NHC7 312 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 GAB3Q8WWW8 586 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 RSAD2Q8WXG1 361 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 HAPLN2Q9GZV7 340 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 PRDM12Q9H4Q4 367 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 DNAJC28Q9NX36 388 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 PRSS50Q9UI38 385 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 DNAI1Q9UI46 699 aa6.61□□□□□ -1.35
PFDN4-202ENST00000441080 TRIM13O60858 407 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 ZNF888P0CJ79 500 aaPredicted RBP6.6□□□□□ -1.35
PFDN4-202ENST00000441080 MTHFD2P13995 350 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 GPR15P49685 360 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 MEOX1P50221 254 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 RRADP55042 308 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 LGALS4P56470 323 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 SRSF2Q01130 221 aaKnown RBP6.6□□□□□ -1.35
PFDN4-202ENST00000441080 SPIDRQ14159 915 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 CLUL1Q15846 466 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 TOR2AQ5JU69 321 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 NT5DC1Q5TFE4 455 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 RALYLQ86SE5 291 aaKnown RBP6.6□□□□□ -1.35
PFDN4-202ENST00000441080 LYSMD2Q8IV50 215 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 MBD6Q96DN6 1003 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 WDR92Q96MX6 357 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 MKS1Q9NXB0 559 aa6.6□□□□□ -1.35
PFDN4-202ENST00000441080 TNKSO95271 1327 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 TRIM75PA6NK02 468 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 NOBOXO60393 691 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 NRP2O60462 931 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 S100BP04271 92 aaPredicted RBP6.59□□□□□ -1.35
PFDN4-202ENST00000441080 CELA3BP08861 270 aa6.59□□□□□ -1.35
PFDN4-202ENST00000441080 XPAP23025 273 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms