RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 MIER3Q7Z3K6 550 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 RBM23Q86U06 439 aaKnown RBP13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 THNSL1Q8IYQ7 743 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 COLGALT1Q8NBJ5 622 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 TM6SF1Q9BZW5 370 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 TMEM117Q9H0C3 514 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 CWH43Q9H720 699 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 TLR9Q9NR96 1032 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 CLEC1BQ9P126 229 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 LZTS1Q9Y250 596 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 DARSP14868 501 aaKnown RBP13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 GPC3P51654 580 aa13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 COASYQ13057 564 aa13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 TARBP2Q15633 366 aaKnown RBP13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 UGCGQ16739 394 aa13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 XKR3Q5GH77 459 aa13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 GALNT17Q6IS24 598 aa13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 ECHDC2Q86YB7 292 aa13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 DAGLBQ8NCG7 672 aa13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 SMRP1Q8NCR6 262 aa13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 SCLT1Q96NL6 688 aa13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 CASD1Q96PB1 797 aa13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 CDCA3Q99618 268 aaPredicted RBP13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 HCSTQ9UBK5 93 aa13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 PUF60Q9UHX1 559 aaKnown RBP13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 PCDHGC5Q9Y5F6 944 aa13.1□□□□□ -0.31
UBE2D4-204ENST00000440899 ATG2AQ2TAZ0 1938 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 MUC6Q6W4X9 2439 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 M0R2N6 131 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 GLP2RO95838 553 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 EOMESO95936 686 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 DNM2P50570 870 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 ERVFC1P60507 584 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 PLCB3Q01970 1234 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 HERC4Q5GLZ8 1057 aaPredicted RBP13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 KCNT2Q6UVM3 1135 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 MOXD1Q6UVY6 613 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 B3GNT9Q6UX72 402 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 RNF135Q8IUD6 432 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 ABI1Q8IZP0 508 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 GJA10Q969M2 543 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 ZNF668Q96K58 619 aaPredicted RBP13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 MBOAT7Q96N66 472 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 NIFKQ9BYG3 293 aaKnown RBP13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 PIEZO1Q92508 2521 aa13.09□□□□□ -0.31
UBE2D4-204ENST00000440899 A0A0U1RQF3 1178 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 PER2O15055 1255 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 TDP2O95551 362 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 PPM1AP35813 382 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 KRT17Q04695 432 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 STK3Q13188 491 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 NONOQ15233 471 aaKnown RBP eCLIP13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 NPY5RQ15761 445 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 DUSP6Q16828 381 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 MTERF2Q49AM1 385 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 LRRC55Q6ZSA7 311 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 KRT25Q7Z3Z0 450 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 LRRC43Q8N309 656 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 RNF169Q8NCN4 708 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 ETNPPLQ8TBG4 499 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 MRPS27Q92552 414 aaKnown RBP13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 ZNF558Q96NG5 402 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 LARP6Q9BRS8 491 aaKnown RBP13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 GCOM2Q9BZD3 368 aaPredicted RBP13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 NGRNQ9NPE2 291 aaKnown RBP13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 PDRG1Q9NUG6 133 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 RNF19AQ9NV58 838 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 DACT1Q9NYF0 836 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 SEPT9Q9UHD8 586 aaPredicted RBP13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 BARX2Q9UMQ3 279 aaPredicted RBP13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 KIAA1671Q9BY89 1806 aa13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 FNDC1Q4ZHG4 1894 aaPredicted RBP13.08□□□□□ -0.32
UBE2D4-204ENST00000440899 IGKV6-21A0A0C4DH24 114 aa13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 DDX11L8A8MPP1 907 aa13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 FSCN2O14926 492 aa13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 STBD1O95210 358 aa13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 FGFR4P22455 802 aa13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 HOXD11P31277 338 aaPredicted RBP13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 ZNF598Q86UK7 904 aaKnown RBP13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 AIFM3Q96NN9 605 aa13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 CEP89Q96ST8 783 aa13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 JPH2Q9BR39 696 aaPredicted RBP13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 INO80BQ9C086 356 aaPredicted RBP13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 CHST12Q9NRB3 414 aa13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 SPG21Q9NZD8 308 aa13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 DDX25Q9UHL0 483 aaKnown RBP13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 MUTYHQ9UIF7 546 aa13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 USP15Q9Y4E8 981 aaPredicted RBP13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 WDFY4Q6ZS81 3184 aa13.07□□□□□ -0.32
UBE2D4-204ENST00000440899 LOC730098B7Z3J9 87 aa13.06□□□□□ -0.32
UBE2D4-204ENST00000440899 MAFO75444 373 aaPredicted RBP13.06□□□□□ -0.32
UBE2D4-204ENST00000440899 CSDE1O75534 798 aaKnown RBP13.06□□□□□ -0.32
UBE2D4-204ENST00000440899 CDKL5O76039 1030 aa13.06□□□□□ -0.32
UBE2D4-204ENST00000440899 SRGAP2BP0DMP2 458 aa13.06□□□□□ -0.32
UBE2D4-204ENST00000440899 XBP1P17861 261 aa13.06□□□□□ -0.32
UBE2D4-204ENST00000440899 PSMC5P62195 406 aa13.06□□□□□ -0.32
UBE2D4-204ENST00000440899 DRP2Q13474 957 aa13.06□□□□□ -0.32
UBE2D4-204ENST00000440899 INF2Q27J81 1249 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms