RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 HSD17B14Q9BPX1 270 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 MXRA8Q9BRK3 442 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 MKNK1Q9BUB5 465 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 CCDC94Q9BW85 323 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-209ENST00000440653 TANGO6Q9C0B7 1094 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 BHMT2Q9H2M3 363 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 PARVGQ9HBI0 331 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 PICK1Q9NRD5 415 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 MYO6Q9UM54 1294 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 PLAGL2Q9UPG8 496 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.04□□□□□ -0.8
HDAC6-209ENST00000440653 ZNF536O15090 1300 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 GTPBP10A4D1E9 387 aaKnown RBP10.03□□□□□ -0.8
HDAC6-209ENST00000440653 IPO5O00410 1097 aaKnown RBP10.03□□□□□ -0.8
HDAC6-209ENST00000440653 LYPLA2O95372 231 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 MAPTP10636 758 aaKnown RBP10.03□□□□□ -0.8
HDAC6-209ENST00000440653 NR2F2P24468 414 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 SFNP31947 248 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 INPP5BP32019 993 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 KCNQ1P51787 676 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 JAK3P52333 1124 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 VAV2P52735 878 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 ZNF131P52739 623 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 ATN1P54259 1190 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-209ENST00000440653 TFF2Q03403 129 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 PPATQ06203 517 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 MYO9BQ13459 2157 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 ADGRE1Q14246 886 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 ELF2Q15723 593 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 TKFCQ3LXA3 575 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 ARSHQ5FYA8 562 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 MIGA2Q7L4E1 593 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 CACNA2D4Q7Z3S7 1137 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 KIAA1328Q86T90 577 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 ACRBPQ8NEB7 543 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 BADQ92934 168 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 HPS3Q969F9 1004 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 CFAP54Q96N23 3096 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 WDR24Q96S15 920 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 ZNF576Q9H609 170 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 LZTFL1Q9NQ48 299 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 TBC1D22BQ9NU19 505 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 ZNF112Q9UJU3 913 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 FBXL5Q9UKA1 691 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 KCNH4Q9UQ05 1017 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 SIP14410 1827 aa10.03□□□□□ -0.8
HDAC6-209ENST00000440653 USP34Q70CQ2 3546 aa10.02□□□□□ -0.8
HDAC6-209ENST00000440653 LCTP09848 1927 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 KIAA1217Q5T5P2 1943 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 ARHGEF35A5YM69 484 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 C19orf81C9J6K1 198 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 USO1O60763 962 aaKnown RBP10.02□□□□□ -0.81
HDAC6-209ENST00000440653 DKC1O60832 514 aaKnown RBP eCLIP10.02□□□□□ -0.81
HDAC6-209ENST00000440653 STAM2O75886 525 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 FLOT1O75955 427 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 LCA5LO95447 670 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 TUBBP07437 444 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 RFX1P22670 979 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 DNAJB2P25686 324 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 ARHGAP25P42331 645 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 RBM10P98175 930 aaKnown RBP10.02□□□□□ -0.81
HDAC6-209ENST00000440653 KRT76Q01546 638 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 CYP4A11Q02928 519 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 CKAP4Q07065 602 aaKnown RBP10.02□□□□□ -0.81
HDAC6-209ENST00000440653 MAPK8IP2Q13387 824 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-209ENST00000440653 MYBPC2Q14324 1141 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 IQCEQ6IPM2 695 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 RINT1Q6NUQ1 792 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 PDXDC1Q6P996 788 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 WDR59Q6PJI9 974 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 HS2ST1Q7LGA3 356 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 RABGGTAQ92696 567 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 GJA10Q969M2 543 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 JAKMIP2Q96AA8 810 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 RPGRIP1Q96KN7 1286 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 CCDC42Q96M95 316 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 CCDC43Q96MW1 224 aaKnown RBP10.02□□□□□ -0.81
HDAC6-209ENST00000440653 ALS2CR12Q96Q35 445 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 LXNQ9BS40 222 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 SENP6Q9GZR1 1112 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-209ENST00000440653 DEF6Q9H4E7 631 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 ZHX3Q9H4I2 956 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 PRDM12Q9H4Q4 367 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 RPAP3Q9H6T3 665 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-209ENST00000440653 NHEJ1Q9H9Q4 299 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-209ENST00000440653 PLCB1Q9NQ66 1216 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 FBXO28Q9NVF7 368 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 ARMCX3Q9UH62 379 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-209ENST00000440653 CDC23Q9UJX2 597 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 DBR1Q9UK59 544 aaKnown RBP10.02□□□□□ -0.81
HDAC6-209ENST00000440653 UBIAD1Q9Y5Z9 338 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 ASTN1O14525 1302 aa10.02□□□□□ -0.81
HDAC6-209ENST00000440653 ZMYM2Q9UBW7 1377 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 EML1O00423 815 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 ATP2A1O14983 1001 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 GCNT3O95395 438 aa10.01□□□□□ -0.81
HDAC6-209ENST00000440653 AFPP02771 609 aaKnown RBP10.01□□□□□ -0.81
HDAC6-209ENST00000440653 P4HBP07237 508 aaKnown RBP10.01□□□□□ -0.81
HDAC6-209ENST00000440653 XRCC5P13010 732 aaKnown RBP10.01□□□□□ -0.81
HDAC6-209ENST00000440653 ABCD1P33897 745 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms