RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 YBX2Q9Y2T7 364 aaKnown RBP20.1■□□□□ 0.81
CPSF4-205ENST00000440514 A0A087WZ62 844 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 DGAT1O75907 488 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 F13A1P00488 732 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 AMHP03971 560 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 MYOGP15173 224 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 MUTP22033 750 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 NFX1Q12986 1120 aaKnown RBP20.09■□□□□ 0.81
CPSF4-205ENST00000440514 BECN1Q14457 450 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 ZRSR1Q15695 479 aaKnown RBP20.09■□□□□ 0.81
CPSF4-205ENST00000440514 EXOC8Q8IYI6 725 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 MYOCDQ8IZQ8 938 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 PHOSPHO2Q8TCD6 241 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 PRPF31Q8WWY3 499 aaKnown RBP20.09■□□□□ 0.81
CPSF4-205ENST00000440514 PSPC1Q8WXF1 523 aaKnown RBP20.09■□□□□ 0.81
CPSF4-205ENST00000440514 FDXACB1Q9BRP7 624 aaPredicted RBP20.09■□□□□ 0.81
CPSF4-205ENST00000440514 NKX2-4Q9H2Z4 354 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 TMX1Q9H3N1 280 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 COL4A3BPQ9Y5P4 624 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 STK24Q9Y6E0 443 aa20.09■□□□□ 0.81
CPSF4-205ENST00000440514 E9PMD0 336 aa20.08■□□□□ 0.81
CPSF4-205ENST00000440514 GAS2O43903 313 aaKnown RBP20.08■□□□□ 0.81
CPSF4-205ENST00000440514 XRCC6P12956 609 aaKnown RBP eCLIP20.08■□□□□ 0.81
CPSF4-205ENST00000440514 DARSP14868 501 aaKnown RBP20.08■□□□□ 0.81
CPSF4-205ENST00000440514 FGFR4P22455 802 aa20.08■□□□□ 0.81
CPSF4-205ENST00000440514 MARCKSP29966 332 aaPredicted RBP20.08■□□□□ 0.81
CPSF4-205ENST00000440514 RAB30Q15771 203 aa20.08■□□□□ 0.81
CPSF4-205ENST00000440514 KCNK18Q7Z418 384 aa20.08■□□□□ 0.81
CPSF4-205ENST00000440514 TIFAQ96CG3 184 aa20.08■□□□□ 0.81
CPSF4-205ENST00000440514 PNMA5Q96PV4 448 aa20.08■□□□□ 0.81
CPSF4-205ENST00000440514 ST3GAL5Q9UNP4 418 aa20.08■□□□□ 0.81
CPSF4-205ENST00000440514 ARHGEF35A5YM69 484 aa20.07■□□□□ 0.8
CPSF4-205ENST00000440514 MGEA5O60502 916 aa20.07■□□□□ 0.8
CPSF4-205ENST00000440514 CSDE1O75534 798 aaKnown RBP20.07■□□□□ 0.8
CPSF4-205ENST00000440514 EIF4BP23588 611 aaKnown RBP20.07■□□□□ 0.8
CPSF4-205ENST00000440514 FOXD4L6Q3SYB3 417 aaPredicted RBP20.07■□□□□ 0.8
CPSF4-205ENST00000440514 GPR153Q6NV75 609 aa20.07■□□□□ 0.8
CPSF4-205ENST00000440514 FOXD4L3Q6VB84 417 aaPredicted RBP20.07■□□□□ 0.8
CPSF4-205ENST00000440514 ZNF410Q86VK4 478 aa20.07■□□□□ 0.8
CPSF4-205ENST00000440514 ASAP3Q8TDY4 903 aa20.07■□□□□ 0.8
CPSF4-205ENST00000440514 TCP11Q8WWU5 503 aa20.07■□□□□ 0.8
CPSF4-205ENST00000440514 FAM161BQ96MY7 647 aa20.07■□□□□ 0.8
CPSF4-205ENST00000440514 PLIN2Q99541 437 aa20.07■□□□□ 0.8
CPSF4-205ENST00000440514 POLR3FQ9H1D9 316 aaPredicted RBP20.07■□□□□ 0.8
CPSF4-205ENST00000440514 BHMT2Q9H2M3 363 aa20.07■□□□□ 0.8
CPSF4-205ENST00000440514 GPRC5CQ9NQ84 441 aa20.07■□□□□ 0.8
CPSF4-205ENST00000440514 MSRAQ9UJ68 235 aa20.07■□□□□ 0.8
CPSF4-205ENST00000440514 FBXO2Q9UK22 296 aaPredicted RBP20.07■□□□□ 0.8
CPSF4-205ENST00000440514 PCDHA11Q9Y5I1 949 aa20.07■□□□□ 0.8
CPSF4-205ENST00000440514 GJB5O95377 273 aa20.06■□□□□ 0.8
CPSF4-205ENST00000440514 LONP1P36776 959 aaKnown RBP20.06■□□□□ 0.8
CPSF4-205ENST00000440514 LAMTOR4Q0VGL1 99 aa20.06■□□□□ 0.8
CPSF4-205ENST00000440514 GRB10Q13322 594 aa20.06■□□□□ 0.8
CPSF4-205ENST00000440514 ZNF697Q5TEC3 545 aa20.06■□□□□ 0.8
CPSF4-205ENST00000440514 PADI6Q6TGC4 694 aa20.06■□□□□ 0.8
CPSF4-205ENST00000440514 MAEAQ7L5Y9 396 aa20.06■□□□□ 0.8
CPSF4-205ENST00000440514 RTN4RL1Q86UN2 441 aaPredicted RBP20.06■□□□□ 0.8
CPSF4-205ENST00000440514 CABP7Q86V35 215 aa20.06■□□□□ 0.8
CPSF4-205ENST00000440514 ZNF710Q8N1W2 664 aa20.06■□□□□ 0.8
CPSF4-205ENST00000440514 AK8Q96MA6 479 aa20.06■□□□□ 0.8
CPSF4-205ENST00000440514 ZBED2Q9BTP6 218 aa20.06■□□□□ 0.8
CPSF4-205ENST00000440514 FTHL17Q9BXU8 183 aa20.06■□□□□ 0.8
CPSF4-205ENST00000440514 GCOM2Q9BZD3 368 aaPredicted RBP20.06■□□□□ 0.8
CPSF4-205ENST00000440514 TTYH1Q9H313 450 aaPredicted RBP20.06■□□□□ 0.8
CPSF4-205ENST00000440514 ENPP3O14638 875 aa20.05■□□□□ 0.8
CPSF4-205ENST00000440514 GPR182O15218 404 aa20.05■□□□□ 0.8
CPSF4-205ENST00000440514 TLL1O43897 1013 aa20.05■□□□□ 0.8
CPSF4-205ENST00000440514 ARHGEF15O94989 841 aa20.05■□□□□ 0.8
CPSF4-205ENST00000440514 UPP2O95045 317 aa20.05■□□□□ 0.8
CPSF4-205ENST00000440514 CA3P07451 260 aa20.05■□□□□ 0.8
CPSF4-205ENST00000440514 SRGAP2CP0DJJ0 459 aa20.05■□□□□ 0.8
CPSF4-205ENST00000440514 IBSPP21815 317 aaPredicted RBP20.05■□□□□ 0.8
CPSF4-205ENST00000440514 NASPP49321 788 aaPredicted RBP20.05■□□□□ 0.8
CPSF4-205ENST00000440514 HYIQ5T013 277 aa20.05■□□□□ 0.8
CPSF4-205ENST00000440514 DEFB123Q8N688 67 aa20.05■□□□□ 0.8
CPSF4-205ENST00000440514 ZNF396Q96N95 335 aaPredicted RBP20.05■□□□□ 0.8
CPSF4-205ENST00000440514 CLIC6Q96NY7 704 aa20.05■□□□□ 0.8
CPSF4-205ENST00000440514 CSRNP2Q9H175 543 aa20.05■□□□□ 0.8
CPSF4-205ENST00000440514 TFIP11Q9UBB9 837 aaKnown RBP20.05■□□□□ 0.8
CPSF4-205ENST00000440514 DAXXQ9UER7 740 aaPredicted RBP20.05■□□□□ 0.8
CPSF4-205ENST00000440514 SZT2Q5T011 3432 aa20.05■□□□□ 0.8
CPSF4-205ENST00000440514 COL4A6Q14031 1691 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 LAMA2P24043 3122 aaKnown RBP20.04■□□□□ 0.8
CPSF4-205ENST00000440514 LCHNA4D1U4 455 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 EYA4O95677 639 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 CDC42EP1Q00587 391 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 CAPSQ13938 189 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 SLC39A14Q15043 492 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 TMEM119Q4V9L6 283 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 SPECC1Q5M775 1068 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 ODR4Q5SWX8 454 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 RNF149Q8NC42 400 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 MCPH1Q8NEM0 835 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 CDK5RAP3Q96JB5 506 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 ADAM2Q99965 735 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 TSPYL2Q9H2G4 693 aaPredicted RBP20.04■□□□□ 0.8
CPSF4-205ENST00000440514 IFT122Q9HBG6 1241 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 DNM3Q9UQ16 869 aa20.04■□□□□ 0.8
CPSF4-205ENST00000440514 DENND3A2RUS2 1198 aa20.03■□□□□ 0.8
CPSF4-205ENST00000440514 BRD1O95696 1058 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms