RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 ODR4Q5SWX8 454 aa23.24■■□□□ 1.31
VIL1-204ENST00000440053 SLC24A5Q71RS6 500 aa23.24■■□□□ 1.31
VIL1-204ENST00000440053 SLFN12Q8IYM2 578 aa23.24■■□□□ 1.31
VIL1-204ENST00000440053 SCLT1Q96NL6 688 aa23.24■■□□□ 1.31
VIL1-204ENST00000440053 LXNQ9BS40 222 aa23.24■■□□□ 1.31
VIL1-204ENST00000440053 TMEM60Q9H2L4 133 aa23.24■■□□□ 1.31
VIL1-204ENST00000440053 BMP2KQ9NSY1 1161 aaPredicted RBP23.24■■□□□ 1.31
VIL1-204ENST00000440053 PCDHA12Q9UN75 941 aa23.24■■□□□ 1.31
VIL1-204ENST00000440053 A0A087WWV3 80 aa23.23■■□□□ 1.31
VIL1-204ENST00000440053 A0A087WZ62 844 aa23.23■■□□□ 1.31
VIL1-204ENST00000440053 CSPG5O95196 566 aa23.23■■□□□ 1.31
VIL1-204ENST00000440053 FAM189BP81408 668 aa23.23■■□□□ 1.31
VIL1-204ENST00000440053 RHPN2Q8IUC4 686 aa23.23■■□□□ 1.31
VIL1-204ENST00000440053 TPH2Q8IWU9 490 aa23.23■■□□□ 1.31
VIL1-204ENST00000440053 HLA-CQ95604 372 aa23.23■■□□□ 1.31
VIL1-204ENST00000440053 CEP170P1Q96L14 293 aa23.23■■□□□ 1.31
VIL1-204ENST00000440053 MTMR9Q96QG7 549 aa23.23■■□□□ 1.31
VIL1-204ENST00000440053 FDXACB1Q9BRP7 624 aaPredicted RBP23.23■■□□□ 1.31
VIL1-204ENST00000440053 TTC12Q9H892 705 aaPredicted RBP23.23■■□□□ 1.31
VIL1-204ENST00000440053 ALG13Q9NP73 1137 aaKnown RBP23.23■■□□□ 1.31
VIL1-204ENST00000440053 HCSTQ9UBK5 93 aa23.23■■□□□ 1.31
VIL1-204ENST00000440053 C5orf67F2Z3F1 127 aa23.22■■□□□ 1.31
VIL1-204ENST00000440053 FGFR1P11362 822 aa23.22■■□□□ 1.31
VIL1-204ENST00000440053 MCM7P33993 719 aa23.22■■□□□ 1.31
VIL1-204ENST00000440053 C4orf19Q8IY42 314 aa23.22■■□□□ 1.31
VIL1-204ENST00000440053 CMTR2Q8IYT2 770 aaKnown RBP23.22■■□□□ 1.31
VIL1-204ENST00000440053 SYMPKQ92797 1274 aaKnown RBP23.22■■□□□ 1.31
VIL1-204ENST00000440053 EIF2AK1Q9BQI3 630 aaKnown RBP23.22■■□□□ 1.31
VIL1-204ENST00000440053 SH2B1Q9NRF2 756 aaPredicted RBP23.22■■□□□ 1.31
VIL1-204ENST00000440053 C1orf112Q9NSG2 853 aa23.22■■□□□ 1.31
VIL1-204ENST00000440053 TBKBP1A7MCY6 615 aa23.21■■□□□ 1.31
VIL1-204ENST00000440053 NEMFO60524 1076 aa23.21■■□□□ 1.31
VIL1-204ENST00000440053 RB1P06400 928 aa23.21■■□□□ 1.31
VIL1-204ENST00000440053 BMP1P13497 986 aa23.21■■□□□ 1.31
VIL1-204ENST00000440053 YWHABP31946 246 aaKnown RBP23.21■■□□□ 1.31
VIL1-204ENST00000440053 DNM2P50570 870 aa23.21■■□□□ 1.31
VIL1-204ENST00000440053 SAFBQ15424 915 aaKnown RBP eCLIP23.21■■□□□ 1.31
VIL1-204ENST00000440053 ZNF174Q15697 407 aa23.21■■□□□ 1.31
VIL1-204ENST00000440053 FBXO18Q8NFZ0 1043 aa23.21■■□□□ 1.31
VIL1-204ENST00000440053 TMEM143Q96AN5 459 aa23.21■■□□□ 1.31
VIL1-204ENST00000440053 CD2BP2O95400 341 aaKnown RBP23.2■■□□□ 1.3
VIL1-204ENST00000440053 PTPROQ16827 1216 aa23.2■■□□□ 1.3
VIL1-204ENST00000440053 FAM184AQ8NB25 1140 aa23.2■■□□□ 1.3
VIL1-204ENST00000440053 NECAB3Q96P71 396 aaPredicted RBP23.2■■□□□ 1.3
VIL1-204ENST00000440053 HSD17B14Q9BPX1 270 aa23.2■■□□□ 1.3
VIL1-204ENST00000440053 GCOM2Q9BZD3 368 aaPredicted RBP23.2■■□□□ 1.3
VIL1-204ENST00000440053 ZSWIM4Q9H7M6 989 aa23.2■■□□□ 1.3
VIL1-204ENST00000440053 COG5Q9UP83 839 aa23.2■■□□□ 1.3
VIL1-204ENST00000440053 DKC1O60832 514 aaKnown RBP eCLIP23.19■■□□□ 1.3
VIL1-204ENST00000440053 ZSCAN20P17040 1043 aaPredicted RBP23.19■■□□□ 1.3
VIL1-204ENST00000440053 DNAJB1P25685 340 aa23.19■■□□□ 1.3
VIL1-204ENST00000440053 RABEP1Q15276 862 aa23.19■■□□□ 1.3
VIL1-204ENST00000440053 TCEAL5Q5H9L2 206 aa23.19■■□□□ 1.3
VIL1-204ENST00000440053 ATP6V0A4Q9HBG4 840 aa23.19■■□□□ 1.3
VIL1-204ENST00000440053 PLAGL2Q9UPG8 496 aa23.19■■□□□ 1.3
VIL1-204ENST00000440053 POLGP54098 1239 aaPredicted RBP23.18■■□□□ 1.3
VIL1-204ENST00000440053 HMGN5P82970 282 aaKnown RBP23.18■■□□□ 1.3
VIL1-204ENST00000440053 XKR9Q5GH70 373 aa23.18■■□□□ 1.3
VIL1-204ENST00000440053 ZNF710Q8N1W2 664 aa23.18■■□□□ 1.3
VIL1-204ENST00000440053 KLHL23Q8NBE8 558 aa23.18■■□□□ 1.3
VIL1-204ENST00000440053 ADAMTS19Q8TE59 1207 aa23.18■■□□□ 1.3
VIL1-204ENST00000440053 PRPF31Q8WWY3 499 aaKnown RBP23.18■■□□□ 1.3
VIL1-204ENST00000440053 NLRP4Q96MN2 994 aa23.18■■□□□ 1.3
VIL1-204ENST00000440053 C11orf84Q9BUA3 381 aaPredicted RBP23.18■■□□□ 1.3
VIL1-204ENST00000440053 DHX33Q9H6R0 707 aaKnown RBP23.18■■□□□ 1.3
VIL1-204ENST00000440053 RNF19AQ9NV58 838 aa23.18■■□□□ 1.3
VIL1-204ENST00000440053 TYW1Q9NV66 732 aaKnown RBP23.18■■□□□ 1.3
VIL1-204ENST00000440053 TMEM161AQ9NX61 479 aa23.18■■□□□ 1.3
VIL1-204ENST00000440053 RWDD3Q9Y3V2 267 aa23.18■■□□□ 1.3
VIL1-204ENST00000440053 NLRC5Q86WI3 1866 aa23.18■■□□□ 1.3
VIL1-204ENST00000440053 CUL9Q8IWT3 2517 aa23.18■■□□□ 1.3
VIL1-204ENST00000440053 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.17■■□□□ 1.3
VIL1-204ENST00000440053 POTEMA6NI47 508 aa23.17■■□□□ 1.3
VIL1-204ENST00000440053 ITGB1P05556 798 aa23.17■■□□□ 1.3
VIL1-204ENST00000440053 CAMK1Q14012 370 aa23.17■■□□□ 1.3
VIL1-204ENST00000440053 NBR1Q14596 966 aa23.17■■□□□ 1.3
VIL1-204ENST00000440053 OTUD6AQ7L8S5 288 aa23.17■■□□□ 1.3
VIL1-204ENST00000440053 ECHDC2Q86YB7 292 aa23.17■■□□□ 1.3
VIL1-204ENST00000440053 RNF169Q8NCN4 708 aa23.17■■□□□ 1.3
VIL1-204ENST00000440053 FOXP1Q9H334 677 aaPredicted RBP23.17■■□□□ 1.3
VIL1-204ENST00000440053 SRGAP2CP0DJJ0 459 aa23.17■■□□□ 1.3
VIL1-204ENST00000440053 SPOUT1Q5T280 376 aaKnown RBP23.17■■□□□ 1.3
VIL1-204ENST00000440053 SPPL3Q8TCT6 385 aa23.17■■□□□ 1.3
VIL1-204ENST00000440053 SLC7A3Q8WY07 619 aa23.17■■□□□ 1.3
VIL1-204ENST00000440053 ELAC1Q9H777 363 aaKnown RBP23.17■■□□□ 1.3
VIL1-204ENST00000440053 UBE2ZQ9H832 354 aaPredicted RBP23.17■■□□□ 1.3
VIL1-204ENST00000440053 IFT122Q9HBG6 1241 aa23.17■■□□□ 1.3
VIL1-204ENST00000440053 MUC3AQ02505 3323 aa23.16■■□□□ 1.3
VIL1-204ENST00000440053 CDC42EP1Q00587 391 aa23.16■■□□□ 1.3
VIL1-204ENST00000440053 AAK1Q2M2I8 961 aa23.16■■□□□ 1.3
VIL1-204ENST00000440053 LONRF3Q496Y0 759 aa23.16■■□□□ 1.3
VIL1-204ENST00000440053 LRRC55Q6ZSA7 311 aa23.16■■□□□ 1.3
VIL1-204ENST00000440053 IL27Q8NEV9 243 aa23.16■■□□□ 1.3
VIL1-204ENST00000440053 PIGOQ8TEQ8 1089 aa23.16■■□□□ 1.3
VIL1-204ENST00000440053 CASD1Q96PB1 797 aa23.16■■□□□ 1.3
VIL1-204ENST00000440053 JPH2Q9BR39 696 aaPredicted RBP23.16■■□□□ 1.3
VIL1-204ENST00000440053 PLVAPQ9BX97 442 aa23.16■■□□□ 1.3
VIL1-204ENST00000440053 CWH43Q9H720 699 aa23.16■■□□□ 1.3
VIL1-204ENST00000440053 COL4A3BPQ9Y5P4 624 aa23.16■■□□□ 1.3
VIL1-204ENST00000440053 GTF2F1P35269 517 aaKnown RBP eCLIP23.15■■□□□ 1.35e-6■□□□□ 11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms