RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CDK17Q00537 523 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 AMPD3Q01432 767 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 NFX1Q12986 1120 aaKnown RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 ITGB3BPQ13352 177 aaPredicted RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 ZNF174Q15697 407 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 FIGNQ5HY92 759 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 TRIM65Q6PJ69 517 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 EP400NLQ6ZTU2 488 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 SPRED2Q7Z698 418 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 PPFIBP1Q86W92 1011 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 LRRC71Q8N4P6 559 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 BANK1Q8NDB2 785 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 SYMPKQ92797 1274 aaKnown RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 KAT2BQ92831 832 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 IWS1Q96ST2 819 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 MTG1Q9BT17 334 aaPredicted RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 AZI2Q9H6S1 392 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 JPH1Q9HDC5 661 aaPredicted RBP5.26□□□□□ -1.57
EDEM3-203ENST00000439962 PPP2R2CQ9Y2T4 447 aa5.26□□□□□ -1.57
EDEM3-203ENST00000439962 LOXHD1Q8IVV2 1947 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 BICDL2A1A5D9 508 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 MOXD2PA6NHM9 499 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 BIN1O00499 593 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 GAS7O60861 476 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 RHOBTB3O94955 611 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 TXKP42681 527 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 PAK1Q13153 545 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 PTGDRQ13258 359 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 LAMC2Q13753 1193 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 BMS1Q14692 1282 aaKnown RBP5.25□□□□□ -1.57
EDEM3-203ENST00000439962 PCNX4Q63HM2 1172 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 CCSAPQ6IQ19 270 aaPredicted RBP5.25□□□□□ -1.57
EDEM3-203ENST00000439962 MYOCDQ8IZQ8 938 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 GPR161Q8N6U8 529 aaKnown RBP5.25□□□□□ -1.57
EDEM3-203ENST00000439962 ANKLE1Q8NAG6 615 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 RNF169Q8NCN4 708 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 RUBCNQ92622 972 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 INTS13Q9NVM9 706 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 ZNHIT6Q9NWK9 470 aaKnown RBP5.25□□□□□ -1.57
EDEM3-203ENST00000439962 SLC9A2Q9UBY0 812 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 STK17AQ9UEE5 414 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 PHF24Q9UPV7 400 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 KIAA1217Q5T5P2 1943 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 KAT6AQ92794 2004 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 USP27XA6NNY8 438 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 MEIS1O00470 390 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 MFAP3LO75121 409 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 KIF20AO95235 890 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 GHRP10912 638 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 ATP1A3P13637 1013 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 FGFR4P22455 802 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 IGFBP4P22692 258 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 PSEN2P49810 448 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 ACTR2P61160 394 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 RAD51AP2Q09MP3 1159 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 NCAPH2Q6IBW4 605 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 DTHD1Q6ZMT9 781 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 FAM126BQ8IXS8 530 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 TXLNBQ8N3L3 684 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 DEFB123Q8N688 67 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 CEP112Q8N8E3 955 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 EHBP1Q8NDI1 1231 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 DNAJB3Q8WWF6 145 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 RABGGTAQ92696 567 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 INPP4AQ96PE3 977 aaPredicted RBP5.25□□□□□ -1.57
EDEM3-203ENST00000439962 GPR20Q99678 358 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 MXRA8Q9BRK3 442 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 ZBED2Q9BTP6 218 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 EDEM3Q9BZQ6 932 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 DISC1Q9NRI5 854 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 RNF19AQ9NV58 838 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 KBTBD4Q9NVX7 518 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 GABBR1Q9UBS5 961 aa5.25□□□□□ -1.57
EDEM3-203ENST00000439962 A0A0G2JMZ2 1700 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 LCTP09848 1927 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 A0A1W2PQJ5 194 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 VWA3AA6NCI4 1184 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 A6NJR5 290 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 RFXAPO00287 272 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 TLR3O15455 904 aaKnown RBP5.24□□□□□ -1.57
EDEM3-203ENST00000439962 FGFR1OPO95684 399 aaKnown RBP5.24□□□□□ -1.57
EDEM3-203ENST00000439962 CCNE2O96020 404 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 IGHA2P01877 340 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 VTNP04004 478 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 PRR29P0C7W0 189 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 SMIM10L2AP0DMW4 78 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 SMIM10L2BP0DMW5 78 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 CASQ1P31415 396 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 FPGSQ05932 587 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 DMTNQ08495 405 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 TRAF1Q13077 416 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 PPFIA1Q13136 1202 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 NEDD9Q14511 834 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 PLCB4Q15147 1175 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 ZNF618Q5T7W0 954 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 LRCH2Q5VUJ6 765 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 PLA2G4FQ68DD2 849 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 METTL7BQ6UX53 244 aa5.24□□□□□ -1.57
EDEM3-203ENST00000439962 CCDC60Q8IWA6 550 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms