RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 INTUQ9ULD6 942 aa12.62□□□□□ -0.39
SMPD4-209ENST00000439886 STXBP3O00186 592 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 CYTH3O43739 400 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 SLC37A4O43826 429 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 GHRP10912 638 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 GNAT1P11488 350 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 ASTE1Q2TB18 679 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-209ENST00000439886 LRRC55Q6ZSA7 311 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 BARGINQ6ZT62 677 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 RBM12BQ8IXT5 1001 aaKnown RBP12.61□□□□□ -0.39
SMPD4-209ENST00000439886 SYCE1Q8N0S2 351 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 CCHCR1Q8TD31 782 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 SCFD2Q8WU76 684 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 TMEM237Q96Q45 408 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 MAGEF1Q9HAY2 307 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 RIC8AQ9NPQ8 531 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 MYO5AQ9Y4I1 1855 aaKnown RBP12.61□□□□□ -0.39
SMPD4-209ENST00000439886 NFAT5O94916 1531 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 TMEM120BA0PK00 339 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 UCHL3P15374 230 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 STAT1P42224 750 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 ZNF131P52739 623 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 COPS2P61201 443 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 MPP3Q13368 585 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 C6orf118Q5T5N4 469 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 RAD54LQ92698 747 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 MMTAG2Q9BU76 263 aaKnown RBP12.61□□□□□ -0.39
SMPD4-209ENST00000439886 NKIRAS1Q9NYS0 192 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 GCNT4Q9P109 453 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 LAD1O00515 517 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 LCA5LO95447 670 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 CCND1P24385 295 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 GJC1P36383 396 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 NCALDP61601 193 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 PABPC4Q13310 644 aaKnown RBP eCLIP12.61□□□□□ -0.393e-6■□□□□ 9
SMPD4-209ENST00000439886 C16orf87Q6PH81 154 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 RFX8Q6ZV50 586 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 TMEM110Q86TL2 294 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 SRRM1Q8IYB3 904 aaKnown RBP12.61□□□□□ -0.39
SMPD4-209ENST00000439886 TMEM47Q9BQJ4 181 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 ERP44Q9BS26 406 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 STMN4Q9H169 189 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-209ENST00000439886 PPP1R9AQ9ULJ8 1098 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 PCDHA12Q9UN75 941 aa12.61□□□□□ -0.39
SMPD4-209ENST00000439886 LMO7Q8WWI1 1683 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 DIXDC1Q155Q3 683 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 KIAA1755Q5JYT7 1200 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 HP1BP3Q5SSJ5 553 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-209ENST00000439886 CDCA2Q69YH5 1023 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-209ENST00000439886 ZNF746Q6NUN9 644 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-209ENST00000439886 JAMLQ86YT9 394 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 SLC35G2Q8TBE7 412 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 RNF25Q96BH1 459 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-209ENST00000439886 PNMA5Q96PV4 448 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 BRIP1Q9BX63 1249 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 PABPC3Q9H361 631 aaKnown RBP12.6□□□□□ -0.39
SMPD4-209ENST00000439886 SLITRK6Q9H5Y7 841 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 CTNNAL1Q9UBT7 734 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 FLT1P17948 1338 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 POTEB3A0JP26 581 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 POTECB2RU33 542 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 SPOPO43791 374 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 KLRK1P26718 216 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 CYP4A11Q02928 519 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 POTEBQ6S5H4 581 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 PHLDB2Q86SQ0 1253 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 ACTRT1Q8TDG2 376 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 TGS1Q96RS0 853 aaKnown RBP12.6□□□□□ -0.39
SMPD4-209ENST00000439886 ERVK-5Q9HDB9 667 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 PVALEFA0A1B0GWK0 134 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 AFPP02771 609 aaKnown RBP12.6□□□□□ -0.39
SMPD4-209ENST00000439886 TARSP26639 723 aaKnown RBP12.6□□□□□ -0.39
SMPD4-209ENST00000439886 TMEM62Q0P6H9 643 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 LRRC47Q8N1G4 583 aaKnown RBP12.6□□□□□ -0.39
SMPD4-209ENST00000439886 C17orf50Q8WW18 174 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 NAF1Q96HR8 494 aaKnown RBP12.6□□□□□ -0.39
SMPD4-209ENST00000439886 NUDCD1Q96RS6 583 aa12.6□□□□□ -0.39
SMPD4-209ENST00000439886 GCNT3O95395 438 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 BRAFP15056 766 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 STAT3P40763 770 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 ACSBG1Q96GR2 724 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 LRRC27Q9C0I9 530 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 MYH7BA7E2Y1 1941 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 SPAG7O75391 227 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 ATRNO75882 1429 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 CYP4F22Q6NT55 531 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 TMEM154Q6P9G4 183 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 RPGRQ92834 1020 aaKnown RBP12.59□□□□□ -0.39
SMPD4-209ENST00000439886 IL17RBQ9NRM6 502 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 DLGAP2Q9P1A6 1054 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 ZFATQ9P243 1243 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 HAO1Q9UJM8 370 aa12.59□□□□□ -0.39
SMPD4-209ENST00000439886 WDR91A4D1P6 747 aa12.58□□□□□ -0.39
SMPD4-209ENST00000439886 C5orf60A6NFR6 353 aa12.58□□□□□ -0.39
SMPD4-209ENST00000439886 SNX3O60493 162 aa12.58□□□□□ -0.39
SMPD4-209ENST00000439886 GH1P01241 217 aa12.58□□□□□ -0.39
SMPD4-209ENST00000439886 RARAP10276 462 aa12.58□□□□□ -0.39
SMPD4-209ENST00000439886 MYBPC2Q14324 1141 aa12.58□□□□□ -0.39
SMPD4-209ENST00000439886 RASA3Q14644 834 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms