RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TRIM49CP0CI26 452 aa16.72■□□□□ 0.27
APP-208ENST00000439274 FERP16591 822 aa16.72■□□□□ 0.27
APP-208ENST00000439274 TMOD1P28289 359 aa16.72■□□□□ 0.27
APP-208ENST00000439274 RBM5P52756 815 aaKnown RBP eCLIP16.72■□□□□ 0.27
APP-208ENST00000439274 SYDE2Q5VT97 1194 aa16.72■□□□□ 0.27
APP-208ENST00000439274 SPICE1Q8N0Z3 855 aa16.72■□□□□ 0.27
APP-208ENST00000439274 OTUD6BQ8N6M0 293 aa16.72■□□□□ 0.27
APP-208ENST00000439274 SLC30A5Q8TAD4 765 aa16.72■□□□□ 0.27
APP-208ENST00000439274 SLC35G2Q8TBE7 412 aa16.72■□□□□ 0.27
APP-208ENST00000439274 LMBR1Q8WVP7 490 aa16.72■□□□□ 0.27
APP-208ENST00000439274 SMCHD1A6NHR9 2005 aa16.72■□□□□ 0.27
APP-208ENST00000439274 A0A0A6YYK5 440 aaPredicted RBP16.72■□□□□ 0.27
APP-208ENST00000439274 CCDC188H7C350 402 aa16.72■□□□□ 0.27
APP-208ENST00000439274 MEFVO15553 781 aaPredicted RBP16.72■□□□□ 0.27
APP-208ENST00000439274 SOX5P35711 763 aa16.72■□□□□ 0.27
APP-208ENST00000439274 PRPF4BQ13523 1007 aaKnown RBP16.72■□□□□ 0.27
APP-208ENST00000439274 DRAP1Q14919 205 aaPredicted RBP16.72■□□□□ 0.27
APP-208ENST00000439274 CBWD6Q4V339 395 aa16.72■□□□□ 0.27
APP-208ENST00000439274 CBWD3Q5JTY5 395 aa16.72■□□□□ 0.27
APP-208ENST00000439274 CBWD5Q5RIA9 395 aa16.72■□□□□ 0.27
APP-208ENST00000439274 DCAF12L1Q5VU92 463 aa16.72■□□□□ 0.27
APP-208ENST00000439274 EIF1ADQ8N9N8 165 aaKnown RBP16.72■□□□□ 0.27
APP-208ENST00000439274 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.72■□□□□ 0.272e-6■■■■■ 78.5
APP-208ENST00000439274 TAS2R14Q9NYV8 317 aa16.72■□□□□ 0.27
APP-208ENST00000439274 DNAJC12Q9UKB3 198 aa16.72■□□□□ 0.27
APP-208ENST00000439274 BCS1LQ9Y276 419 aa16.72■□□□□ 0.27
APP-208ENST00000439274 KLRG2A4D1S0 409 aaPredicted RBP16.71■□□□□ 0.27
APP-208ENST00000439274 BACH1O14867 736 aa16.71■□□□□ 0.27
APP-208ENST00000439274 PSMC2P35998 433 aaKnown RBP16.71■□□□□ 0.27
APP-208ENST00000439274 CYP2J2P51589 502 aa16.71■□□□□ 0.27
APP-208ENST00000439274 PALB2Q86YC2 1186 aa16.71■□□□□ 0.27
APP-208ENST00000439274 SYCE1Q8N0S2 351 aa16.71■□□□□ 0.27
APP-208ENST00000439274 ARHGEF26Q96DR7 871 aa16.71■□□□□ 0.27
APP-208ENST00000439274 DYDC2Q96IM9 177 aa16.71■□□□□ 0.27
APP-208ENST00000439274 POLR3CQ9BUI4 534 aaPredicted RBP16.71■□□□□ 0.27
APP-208ENST00000439274 CNOT8Q9UFF9 292 aaKnown RBP16.71■□□□□ 0.27
APP-208ENST00000439274 AMFRQ9UKV5 643 aa16.71■□□□□ 0.27
APP-208ENST00000439274 FMO5P49326 533 aa16.71■□□□□ 0.27
APP-208ENST00000439274 UBXN2AP68543 259 aa16.71■□□□□ 0.27
APP-208ENST00000439274 KCNV1Q6PIU1 500 aa16.71■□□□□ 0.27
APP-208ENST00000439274 MMS22LQ6ZRQ5 1243 aa16.71■□□□□ 0.27
APP-208ENST00000439274 TMC3Q7Z5M5 1100 aa16.71■□□□□ 0.27
APP-208ENST00000439274 WDR18Q9BV38 432 aa16.71■□□□□ 0.27
APP-208ENST00000439274 GPR88Q9GZN0 384 aa16.71■□□□□ 0.27
APP-208ENST00000439274 OLFML3Q9NRN5 406 aa16.71■□□□□ 0.27
APP-208ENST00000439274 SEPT11Q9NVA2 429 aaKnown RBP16.71■□□□□ 0.27
APP-208ENST00000439274 PI4KBQ9UBF8 816 aa16.71■□□□□ 0.27
APP-208ENST00000439274 GTPBP10A4D1E9 387 aaKnown RBP16.7■□□□□ 0.26
APP-208ENST00000439274 SLITRK3O94933 977 aa16.7■□□□□ 0.26
APP-208ENST00000439274 ANXA13P27216 316 aa16.7■□□□□ 0.26
APP-208ENST00000439274 CIITAP33076 1130 aa16.7■□□□□ 0.26
APP-208ENST00000439274 DHX9Q08211 1270 aaKnown RBP16.7■□□□□ 0.26
APP-208ENST00000439274 ZNF211Q13398 564 aaPredicted RBP16.7■□□□□ 0.26
APP-208ENST00000439274 RNF187Q5TA31 235 aaPredicted RBP16.7■□□□□ 0.26
APP-208ENST00000439274 SLITRK6Q9H5Y7 841 aa16.7■□□□□ 0.26
APP-208ENST00000439274 SLC12A6Q9UHW9 1150 aa16.7■□□□□ 0.26
APP-208ENST00000439274 INTUQ9ULD6 942 aa16.7■□□□□ 0.26
APP-208ENST00000439274 NOVA2Q9UNW9 492 aaKnown RBP16.7■□□□□ 0.26
APP-208ENST00000439274 IGLV3-22A0A075B6J6 115 aa16.7■□□□□ 0.26
APP-208ENST00000439274 DDX3YO15523 660 aaKnown RBP16.7■□□□□ 0.26
APP-208ENST00000439274 FAM107AO95990 144 aa16.7■□□□□ 0.26
APP-208ENST00000439274 FOSP01100 380 aaPredicted RBP16.7■□□□□ 0.26
APP-208ENST00000439274 HNRNPH1P31943 449 aaKnown RBP16.7■□□□□ 0.26
APP-208ENST00000439274 IFT88Q13099 833 aa16.7■□□□□ 0.26
APP-208ENST00000439274 ARHGAP44Q17R89 818 aa16.7■□□□□ 0.26
APP-208ENST00000439274 ODF2Q5BJF6 829 aa16.7■□□□□ 0.26
APP-208ENST00000439274 C1orf186Q6ZWK4 172 aa16.7■□□□□ 0.26
APP-208ENST00000439274 CCDC26Q8TAB7 109 aa16.7■□□□□ 0.26
APP-208ENST00000439274 HSD17B14Q9BPX1 270 aa16.7■□□□□ 0.26
APP-208ENST00000439274 COL11A2P13942 1736 aaPredicted RBP16.7■□□□□ 0.26
APP-208ENST00000439274 FNTAP49354 379 aa16.69■□□□□ 0.26
APP-208ENST00000439274 GTF2A1P52655 376 aaPredicted RBP16.69■□□□□ 0.26
APP-208ENST00000439274 NPEPPSP55786 919 aa16.69■□□□□ 0.26
APP-208ENST00000439274 POU5F1Q01860 360 aaKnown RBP16.69■□□□□ 0.26
APP-208ENST00000439274 ABCB5Q2M3G0 1257 aa16.69■□□□□ 0.26
APP-208ENST00000439274 PLCD3Q8N3E9 789 aa16.69■□□□□ 0.26
APP-208ENST00000439274 RDH13Q8NBN7 331 aa16.69■□□□□ 0.26
APP-208ENST00000439274 ATP8B4Q8TF62 1192 aa16.69■□□□□ 0.26
APP-208ENST00000439274 ZDHHC15Q96MV8 337 aa16.69■□□□□ 0.26
APP-208ENST00000439274 STK33Q9BYT3 514 aa16.69■□□□□ 0.26
APP-208ENST00000439274 THAP2Q9H0W7 228 aa16.69■□□□□ 0.26
APP-208ENST00000439274 ERVK-5Q9HDB9 667 aa16.69■□□□□ 0.26
APP-208ENST00000439274 LRRN2O75325 713 aa16.69■□□□□ 0.26
APP-208ENST00000439274 GAP43P17677 238 aa16.69■□□□□ 0.26
APP-208ENST00000439274 MMP14P50281 582 aa16.69■□□□□ 0.26
APP-208ENST00000439274 AADACL2Q6P093 401 aa16.69■□□□□ 0.26
APP-208ENST00000439274 OTOP1Q7RTM1 612 aa16.69■□□□□ 0.26
APP-208ENST00000439274 BANK1Q8NDB2 785 aa16.69■□□□□ 0.26
APP-208ENST00000439274 RFFLQ8WZ73 363 aa16.69■□□□□ 0.26
APP-208ENST00000439274 CYFIP2Q96F07 1278 aa16.69■□□□□ 0.26
APP-208ENST00000439274 FIZ1Q96SL8 496 aa16.69■□□□□ 0.26
APP-208ENST00000439274 INTS2Q9H0H0 1204 aaKnown RBP16.69■□□□□ 0.26
APP-208ENST00000439274 WRAP73Q9P2S5 460 aaPredicted RBP16.69■□□□□ 0.26
APP-208ENST00000439274 UTP11Q9Y3A2 253 aaKnown RBP16.69■□□□□ 0.26
APP-208ENST00000439274 NCANO14594 1321 aa16.69■□□□□ 0.26
APP-208ENST00000439274 ATXN2Q99700 1313 aaKnown RBP16.69■□□□□ 0.26
APP-208ENST00000439274 GH2P01242 217 aa16.68■□□□□ 0.26
APP-208ENST00000439274 BMP3P12645 472 aa16.68■□□□□ 0.26
APP-208ENST00000439274 LMNB1P20700 586 aa16.68■□□□□ 0.26
APP-208ENST00000439274 PPATQ06203 517 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms