RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 CASD1Q96PB1 797 aa20.5■□□□□ 0.87
GTF3A-204ENST00000438571 MAP7D2Q96T17 732 aa20.5■□□□□ 0.87
GTF3A-204ENST00000438571 TLR9Q9NR96 1032 aa20.5■□□□□ 0.87
GTF3A-204ENST00000438571 PCDHA4Q9UN74 947 aa20.5■□□□□ 0.87
GTF3A-204ENST00000438571 PCDHB12Q9Y5F1 795 aa20.5■□□□□ 0.87
GTF3A-204ENST00000438571 MYO10Q9HD67 2058 aa20.5■□□□□ 0.87
GTF3A-204ENST00000438571 FSCN2O14926 492 aa20.49■□□□□ 0.87
GTF3A-204ENST00000438571 PSMD10O75832 226 aa20.49■□□□□ 0.87
GTF3A-204ENST00000438571 STBD1O95210 358 aa20.49■□□□□ 0.87
GTF3A-204ENST00000438571 EYA4O95677 639 aa20.49■□□□□ 0.87
GTF3A-204ENST00000438571 USP11P51784 963 aa20.49■□□□□ 0.87
GTF3A-204ENST00000438571 TARBP2Q15633 366 aaKnown RBP20.49■□□□□ 0.87
GTF3A-204ENST00000438571 MTERF2Q49AM1 385 aa20.49■□□□□ 0.87
GTF3A-204ENST00000438571 PLPP4Q5VZY2 271 aa20.49■□□□□ 0.87
GTF3A-204ENST00000438571 B3GNT9Q6UX72 402 aa20.49■□□□□ 0.87
GTF3A-204ENST00000438571 PPP2R3CQ969Q6 453 aa20.49■□□□□ 0.87
GTF3A-204ENST00000438571 CEP89Q96ST8 783 aa20.49■□□□□ 0.87
GTF3A-204ENST00000438571 RIT2Q99578 217 aa20.49■□□□□ 0.87
GTF3A-204ENST00000438571 ELAC1Q9H777 363 aaKnown RBP20.49■□□□□ 0.87
GTF3A-204ENST00000438571 SH3GLB2Q9NR46 395 aa20.49■□□□□ 0.87
GTF3A-204ENST00000438571 SEPT9Q9UHD8 586 aaPredicted RBP20.49■□□□□ 0.87
GTF3A-204ENST00000438571 WDFY4Q6ZS81 3184 aa20.48■□□□□ 0.87
GTF3A-204ENST00000438571 ATF7P17544 494 aaPredicted RBP20.48■□□□□ 0.87
GTF3A-204ENST00000438571 EIF4BP23588 611 aaKnown RBP20.48■□□□□ 0.87
GTF3A-204ENST00000438571 HOXD11P31277 338 aaPredicted RBP20.48■□□□□ 0.87
GTF3A-204ENST00000438571 SSRP1Q08945 709 aaKnown RBP20.48■□□□□ 0.87
GTF3A-204ENST00000438571 COASYQ13057 564 aa20.48■□□□□ 0.87
GTF3A-204ENST00000438571 Q4G0T1 1027 aa20.48■□□□□ 0.87
GTF3A-204ENST00000438571 CLLU1OSQ5K130 101 aa20.48■□□□□ 0.87
GTF3A-204ENST00000438571 MIER3Q7Z3K6 550 aa20.48■□□□□ 0.87
GTF3A-204ENST00000438571 ECHDC2Q86YB7 292 aa20.48■□□□□ 0.87
GTF3A-204ENST00000438571 RNF135Q8IUD6 432 aa20.48■□□□□ 0.87
GTF3A-204ENST00000438571 BLIDQ8IZY5 108 aa20.48■□□□□ 0.87
GTF3A-204ENST00000438571 RNF169Q8NCN4 708 aa20.48■□□□□ 0.87
GTF3A-204ENST00000438571 MICAL1Q8TDZ2 1067 aa20.48■□□□□ 0.87
GTF3A-204ENST00000438571 TMEM117Q9H0C3 514 aa20.48■□□□□ 0.87
GTF3A-204ENST00000438571 TLE6Q9H808 572 aa20.48■□□□□ 0.87
GTF3A-204ENST00000438571 AAASQ9NRG9 546 aa20.48■□□□□ 0.87
GTF3A-204ENST00000438571 USP15Q9Y4E8 981 aaPredicted RBP20.48■□□□□ 0.87
GTF3A-204ENST00000438571 TDRD15B5MCY1 1934 aaKnown RBP20.47■□□□□ 0.87
GTF3A-204ENST00000438571 SLC37A4O43826 429 aa20.47■□□□□ 0.87
GTF3A-204ENST00000438571 DARSP14868 501 aaKnown RBP20.47■□□□□ 0.87
GTF3A-204ENST00000438571 LAG3P18627 525 aa20.47■□□□□ 0.87
GTF3A-204ENST00000438571 TMOD1P28289 359 aa20.47■□□□□ 0.87
GTF3A-204ENST00000438571 JAK3P52333 1124 aa20.47■□□□□ 0.87
GTF3A-204ENST00000438571 UBE3AQ05086 875 aa20.47■□□□□ 0.87
GTF3A-204ENST00000438571 DUSP6Q16828 381 aa20.47■□□□□ 0.87
GTF3A-204ENST00000438571 TRIM22Q8IYM9 498 aa20.47■□□□□ 0.87
GTF3A-204ENST00000438571 ETNPPLQ8TBG4 499 aa20.47■□□□□ 0.87
GTF3A-204ENST00000438571 MBOAT7Q96N66 472 aa20.47■□□□□ 0.87
GTF3A-204ENST00000438571 NRBP2Q9NSY0 501 aa20.47■□□□□ 0.87
GTF3A-204ENST00000438571 KCNJ14Q9UNX9 436 aa20.47■□□□□ 0.87
GTF3A-204ENST00000438571 C2orf16Q68DN1 1984 aa20.46■□□□□ 0.87
GTF3A-204ENST00000438571 DENND4AQ7Z401 1863 aa20.46■□□□□ 0.87
GTF3A-204ENST00000438571 DEXIO95424 95 aa20.46■□□□□ 0.87
GTF3A-204ENST00000438571 SFNP31947 248 aa20.46■□□□□ 0.87
GTF3A-204ENST00000438571 TBC1D8BQ0IIM8 1120 aa20.46■□□□□ 0.87
GTF3A-204ENST00000438571 CSPP1Q1MSJ5 1256 aa20.46■□□□□ 0.87
GTF3A-204ENST00000438571 DAGLBQ8NCG7 672 aa20.46■□□□□ 0.87
GTF3A-204ENST00000438571 NLRP7Q8WX94 980 aa20.46■□□□□ 0.87
GTF3A-204ENST00000438571 SCLT1Q96NL6 688 aa20.46■□□□□ 0.87
GTF3A-204ENST00000438571 POP1Q99575 1024 aaKnown RBP20.46■□□□□ 0.87
GTF3A-204ENST00000438571 ARIH1Q9Y4X5 557 aaPredicted RBP20.46■□□□□ 0.87
GTF3A-204ENST00000438571 CYP46A1Q9Y6A2 500 aa20.46■□□□□ 0.87
GTF3A-204ENST00000438571 CYP3A7-CYP3A51PA0A087WV96 503 aa20.45■□□□□ 0.86
GTF3A-204ENST00000438571 HIDE1A8MVS5 230 aa20.45■□□□□ 0.86
GTF3A-204ENST00000438571 ZSCAN20P17040 1043 aaPredicted RBP20.45■□□□□ 0.86
GTF3A-204ENST00000438571 CYP3A7P24462 503 aa20.45■□□□□ 0.86
GTF3A-204ENST00000438571 INF2Q27J81 1249 aa20.45■□□□□ 0.86
GTF3A-204ENST00000438571 PLA2G4FQ68DD2 849 aa20.45■□□□□ 0.86
GTF3A-204ENST00000438571 KCNT2Q6UVM3 1135 aa20.45■□□□□ 0.86
GTF3A-204ENST00000438571 HFE2Q6ZVN8 426 aa20.45■□□□□ 0.86
GTF3A-204ENST00000438571 ZNF598Q86UK7 904 aaKnown RBP20.45■□□□□ 0.86
GTF3A-204ENST00000438571 LRRC43Q8N309 656 aa20.45■□□□□ 0.86
GTF3A-204ENST00000438571 HELQQ8TDG4 1101 aa20.45■□□□□ 0.86
GTF3A-204ENST00000438571 MRPS27Q92552 414 aaKnown RBP20.45■□□□□ 0.86
GTF3A-204ENST00000438571 ZNF274Q96GC6 653 aaPredicted RBP20.45■□□□□ 0.86
GTF3A-204ENST00000438571 GJB4Q9NTQ9 266 aa20.45■□□□□ 0.86
GTF3A-204ENST00000438571 CDH22Q9UJ99 828 aa20.45■□□□□ 0.86
GTF3A-204ENST00000438571 A0A087WZ62 844 aa20.44■□□□□ 0.86
GTF3A-204ENST00000438571 EML1O00423 815 aa20.44■□□□□ 0.86
GTF3A-204ENST00000438571 CPLX1O14810 134 aa20.44■□□□□ 0.86
GTF3A-204ENST00000438571 PLCB3Q01970 1234 aa20.44■□□□□ 0.86
GTF3A-204ENST00000438571 SCRN1Q12765 414 aa20.44■□□□□ 0.86
GTF3A-204ENST00000438571 KCNC3Q14003 757 aa20.44■□□□□ 0.86
GTF3A-204ENST00000438571 HERC4Q5GLZ8 1057 aaPredicted RBP20.44■□□□□ 0.86
GTF3A-204ENST00000438571 TCF25Q9BQ70 676 aa20.44■□□□□ 0.86
GTF3A-204ENST00000438571 FDXACB1Q9BRP7 624 aaPredicted RBP20.44■□□□□ 0.86
GTF3A-204ENST00000438571 APOL5Q9BWW9 433 aa20.44■□□□□ 0.86
GTF3A-204ENST00000438571 NIFKQ9BYG3 293 aaKnown RBP20.44■□□□□ 0.86
GTF3A-204ENST00000438571 RNF216Q9NWF9 866 aaPredicted RBP20.44■□□□□ 0.86
GTF3A-204ENST00000438571 PLXNA3P51805 1871 aa20.43■□□□□ 0.86
GTF3A-204ENST00000438571 IGKV6-21A0A0C4DH24 114 aa20.43■□□□□ 0.86
GTF3A-204ENST00000438571 LOC730098B7Z3J9 87 aa20.43■□□□□ 0.86
GTF3A-204ENST00000438571 NONOQ15233 471 aaKnown RBP eCLIP20.43■□□□□ 0.86
GTF3A-204ENST00000438571 LLGL2Q6P1M3 1020 aa20.43■□□□□ 0.86
GTF3A-204ENST00000438571 FAM43BQ6ZT52 329 aaPredicted RBP20.43■□□□□ 0.86
GTF3A-204ENST00000438571 KSR1Q8IVT5 923 aa20.43■□□□□ 0.86
GTF3A-204ENST00000438571 ABI1Q8IZP0 508 aa20.43■□□□□ 0.86
GTF3A-204ENST00000438571 RDM1Q8NG50 284 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms