RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 SALL2Q9Y467 1007 aaPredicted RBP13.04□□□□□ -0.32
RTN4-211ENST00000438462 TRPV2Q9Y5S1 764 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 DENND3A2RUS2 1198 aa13.03□□□□□ -0.32
RTN4-211ENST00000438462 C9IYK1 514 aa13.03□□□□□ -0.32
RTN4-211ENST00000438462 NOP56O00567 594 aaKnown RBP13.03□□□□□ -0.32
RTN4-211ENST00000438462 SP2Q02086 613 aa13.03□□□□□ -0.32
RTN4-211ENST00000438462 NFX1Q12986 1120 aaKnown RBP13.03□□□□□ -0.32
RTN4-211ENST00000438462 OS9Q13438 667 aaPredicted RBP13.03□□□□□ -0.32
RTN4-211ENST00000438462 TTF1Q15361 905 aaPredicted RBP13.03□□□□□ -0.32
RTN4-211ENST00000438462 ZNF687Q8N1G0 1237 aa13.03□□□□□ -0.32
RTN4-211ENST00000438462 CHCHD4Q8N4Q1 142 aa13.03□□□□□ -0.32
RTN4-211ENST00000438462 SYTL5Q8TDW5 730 aaPredicted RBP13.03□□□□□ -0.32
RTN4-211ENST00000438462 ADAM2Q99965 735 aa13.03□□□□□ -0.32
RTN4-211ENST00000438462 FAM49AQ9H0Q0 323 aaPredicted RBP13.03□□□□□ -0.32
RTN4-211ENST00000438462 RGS18Q9NS28 235 aa13.03□□□□□ -0.32
RTN4-211ENST00000438462 C1orf112Q9NSG2 853 aa13.03□□□□□ -0.32
RTN4-211ENST00000438462 SMC4Q9NTJ3 1288 aa13.03□□□□□ -0.32
RTN4-211ENST00000438462 TMEM161AQ9NX61 479 aa13.03□□□□□ -0.32
RTN4-211ENST00000438462 PCDHGA5Q9Y5G8 931 aa13.03□□□□□ -0.32
RTN4-211ENST00000438462 ACACAQ13085 2346 aa13.03□□□□□ -0.32
RTN4-211ENST00000438462 SPAARA0A1B0GVQ0 90 aa13.02□□□□□ -0.33
RTN4-211ENST00000438462 LNP1A1A4G5 178 aa13.02□□□□□ -0.33
RTN4-211ENST00000438462 K7ESF4 209 aa13.02□□□□□ -0.33
RTN4-211ENST00000438462 MYBP10242 640 aa13.02□□□□□ -0.33
RTN4-211ENST00000438462 KLRC2P26717 231 aa13.02□□□□□ -0.33
RTN4-211ENST00000438462 ARHGEF16Q5VV41 709 aa13.02□□□□□ -0.33
RTN4-211ENST00000438462 SLC24A5Q71RS6 500 aa13.02□□□□□ -0.33
RTN4-211ENST00000438462 KBTBD6Q86V97 674 aa13.02□□□□□ -0.33
RTN4-211ENST00000438462 TMEM173Q86WV6 379 aaPredicted RBP13.02□□□□□ -0.33
RTN4-211ENST00000438462 RHOBTB2Q9BYZ6 727 aa13.02□□□□□ -0.33
RTN4-211ENST00000438462 HEBP1Q9NRV9 189 aa13.02□□□□□ -0.33
RTN4-211ENST00000438462 APC2O95996 2303 aa13.02□□□□□ -0.33
RTN4-211ENST00000438462 MINDY4BA8MYZ0 360 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 M0QZ92 97 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 RFPL2O75678 378 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 TSPY3P0CV98 308 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 TSPY8P0CW00 308 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 SIM1P81133 766 aaPredicted RBP13.01□□□□□ -0.33
RTN4-211ENST00000438462 CACNB1Q02641 598 aaPredicted RBP13.01□□□□□ -0.33
RTN4-211ENST00000438462 PPFIA1Q13136 1202 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 USH1GQ495M9 461 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 UTP14CQ5TAP6 766 aaKnown RBP13.01□□□□□ -0.33
RTN4-211ENST00000438462 IER5Q5VY09 327 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 CYP26C1Q6V0L0 522 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 SSH1Q8WYL5 1049 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 TBC1D5Q92609 795 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 GPKOWQ92917 476 aaPredicted RBP eCLIP13.01□□□□□ -0.33
RTN4-211ENST00000438462 ZBTB10Q96DT7 871 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 KXD1Q9BQD3 176 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 RNF19AQ9NV58 838 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
RTN4-211ENST00000438462 WDR81Q562E7 1941 aa13□□□□□ -0.33
RTN4-211ENST00000438462 NR3C2P08235 984 aa13□□□□□ -0.33
RTN4-211ENST00000438462 POLGP54098 1239 aaPredicted RBP13□□□□□ -0.33
RTN4-211ENST00000438462 GAS6Q14393 721 aa13□□□□□ -0.33
RTN4-211ENST00000438462 BTNL9Q6UXG8 535 aa13□□□□□ -0.33
RTN4-211ENST00000438462 MTSS1LQ765P7 747 aa13□□□□□ -0.33
RTN4-211ENST00000438462 CACNA2D4Q7Z3S7 1137 aa13□□□□□ -0.33
RTN4-211ENST00000438462 ABI1Q8IZP0 508 aa13□□□□□ -0.33
RTN4-211ENST00000438462 NEDD1Q8NHV4 660 aa13□□□□□ -0.33
RTN4-211ENST00000438462 PHKBQ93100 1093 aa13□□□□□ -0.33
RTN4-211ENST00000438462 ZNF707Q96C28 371 aaPredicted RBP13□□□□□ -0.33
RTN4-211ENST00000438462 EAF2Q96CJ1 260 aaPredicted RBP13□□□□□ -0.33
RTN4-211ENST00000438462 EMILIN2Q9BXX0 1053 aa13□□□□□ -0.33
RTN4-211ENST00000438462 PIDD1Q9HB75 910 aa13□□□□□ -0.33
RTN4-211ENST00000438462 TMEM9BQ9NQ34 198 aa13□□□□□ -0.33
RTN4-211ENST00000438462 RELNP78509 3460 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 MBLAC1A4D2B0 266 aaPredicted RBP12.99□□□□□ -0.33
RTN4-211ENST00000438462 H0Y626 953 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 TRIM16O95361 564 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 CNPP09543 421 aaKnown RBP12.99□□□□□ -0.33
RTN4-211ENST00000438462 HOXC13P31276 330 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 BCAR1P56945 870 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 CFHR1Q03591 330 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 GRIK4Q16099 956 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 UAP1L1Q3KQV9 507 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 SBK1Q52WX2 424 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 KCNV1Q6PIU1 500 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 WDR5BQ86VZ2 330 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 ZNF513Q8N8E2 541 aaPredicted RBP12.99□□□□□ -0.33
RTN4-211ENST00000438462 LSM14AQ8ND56 463 aaKnown RBP12.99□□□□□ -0.33
RTN4-211ENST00000438462 RGS22Q8NE09 1264 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 ELAC1Q9H777 363 aaKnown RBP12.99□□□□□ -0.33
RTN4-211ENST00000438462 LMAN1LQ9HAT1 526 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 PXMP2Q9NR77 195 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 PNMA2Q9UL42 364 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 STX8Q9UNK0 236 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 ZFP37Q9Y6Q3 630 aaPredicted RBP12.99□□□□□ -0.33
RTN4-211ENST00000438462 COL4A2P08572 1712 aa12.99□□□□□ -0.33
RTN4-211ENST00000438462 GOLIM4O00461 696 aa12.98□□□□□ -0.33
RTN4-211ENST00000438462 HOXA2O43364 376 aa12.98□□□□□ -0.33
RTN4-211ENST00000438462 WISP1O95388 367 aa12.98□□□□□ -0.33
RTN4-211ENST00000438462 CHGBP05060 677 aa12.98□□□□□ -0.33
RTN4-211ENST00000438462 MYCLP12524 364 aaPredicted RBP12.98□□□□□ -0.33
RTN4-211ENST00000438462 ADD2P35612 726 aa12.98□□□□□ -0.33
RTN4-211ENST00000438462 ALDH7A1P49419 539 aaKnown RBP12.98□□□□□ -0.33
RTN4-211ENST00000438462 MARCH8Q5T0T0 291 aa12.98□□□□□ -0.33
RTN4-211ENST00000438462 DDX53Q86TM3 631 aaKnown RBP12.98□□□□□ -0.33
RTN4-211ENST00000438462 DCAF4Q8WV16 495 aa12.98□□□□□ -0.33
RTN4-211ENST00000438462 GAB3Q8WWW8 586 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms