RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 SURF1Q15526 300 aa11.07□□□□□ -0.64
SHPRH-206ENST00000438092 SLFN12LQ6IEE8 588 aa11.07□□□□□ -0.64
SHPRH-206ENST00000438092 ADGRF4Q8IZF3 695 aa11.07□□□□□ -0.64
SHPRH-206ENST00000438092 SH3KBP1Q96B97 665 aa11.07□□□□□ -0.64
SHPRH-206ENST00000438092 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
SHPRH-206ENST00000438092 RUNDC3BQ96NL0 473 aa11.07□□□□□ -0.64
SHPRH-206ENST00000438092 Q9H521 79 aa11.07□□□□□ -0.64
SHPRH-206ENST00000438092 NOVA2Q9UNW9 492 aaKnown RBP11.07□□□□□ -0.64
SHPRH-206ENST00000438092 SRPRBQ9Y5M8 271 aaKnown RBP11.07□□□□□ -0.64
SHPRH-206ENST00000438092 ZBTB5O15062 677 aa11.07□□□□□ -0.64
SHPRH-206ENST00000438092 ANP32DO95626 131 aa11.07□□□□□ -0.64
SHPRH-206ENST00000438092 OXER1Q8TDS5 423 aa11.07□□□□□ -0.64
SHPRH-206ENST00000438092 DCAF4Q8WV16 495 aa11.07□□□□□ -0.64
SHPRH-206ENST00000438092 ASIC4Q96FT7 647 aa11.07□□□□□ -0.64
SHPRH-206ENST00000438092 PPP1R9AQ9ULJ8 1098 aa11.07□□□□□ -0.64
SHPRH-206ENST00000438092 SERPIND1P05546 499 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 SLFN14P0C7P3 912 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 STMN1P16949 149 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 GRIK1P39086 918 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 NNMTP40261 264 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 EPHA10Q5JZY3 1008 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 BRINP3Q76B58 766 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 AGR3Q8TD06 166 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 PBXIP1Q96AQ6 731 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 KIF12Q96FN5 646 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 SPZ1Q9BXG8 430 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 MLXIPLQ9NP71 852 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 NPHP3-ACAD11A0A0J9YXS1 232 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 CAPN15O75808 1086 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 MTMR2Q13614 643 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 TAS2R42Q7RTR8 314 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 SP110Q9HB58 689 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 COL15A1P39059 1388 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 TNPO2O14787 897 aaKnown RBP11.06□□□□□ -0.64
SHPRH-206ENST00000438092 LBRQ14739 615 aaKnown RBP11.06□□□□□ -0.64
SHPRH-206ENST00000438092 THEMIS2Q5TEJ8 643 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 PP2D1A8MPX8 630 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 PRPF4O43172 522 aaKnown RBP eCLIP11.06□□□□□ -0.64
SHPRH-206ENST00000438092 DNAJC6O75061 913 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 JAK3P52333 1124 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 ZNF211Q13398 564 aaPredicted RBP11.06□□□□□ -0.64
SHPRH-206ENST00000438092 CCDC197Q8NCU1 140 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 OTULINQ96BN8 352 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 NR1H4Q96RI1 486 aaPredicted RBP11.06□□□□□ -0.64
SHPRH-206ENST00000438092 GPR108Q9NPR9 543 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 CNOT8Q9UFF9 292 aaKnown RBP11.06□□□□□ -0.64
SHPRH-206ENST00000438092 CTNND1O60716 968 aaKnown RBP11.06□□□□□ -0.64
SHPRH-206ENST00000438092 ZNF157P51786 506 aaPredicted RBP11.06□□□□□ -0.64
SHPRH-206ENST00000438092 ARHGDIAP52565 204 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 C11orf70Q9BRQ4 267 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 VPS11Q9H270 941 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 SMYD3Q9H7B4 428 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 HPS4Q9NQG7 708 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 TOPORSQ9NS56 1045 aaPredicted RBP11.06□□□□□ -0.64
SHPRH-206ENST00000438092 ZBTB12Q9Y330 459 aaPredicted RBP11.06□□□□□ -0.64
SHPRH-206ENST00000438092 CCDC78A2IDD5 438 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 HSPA4LO95757 839 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 SYF2O95926 243 aaKnown RBP11.06□□□□□ -0.64
SHPRH-206ENST00000438092 PAMP19021 973 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 GFPT1Q06210 699 aaPredicted RBP11.06□□□□□ -0.64
SHPRH-206ENST00000438092 RBBP7Q16576 425 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 GLE1Q53GS7 698 aaKnown RBP11.06□□□□□ -0.64
SHPRH-206ENST00000438092 CDC23Q9UJX2 597 aa11.06□□□□□ -0.64
SHPRH-206ENST00000438092 CEP170Q5SW79 1584 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 FGGP02679 453 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 ATP1A3P13637 1013 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 LRRC31Q6UY01 552 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 APOBEC3FQ8IUX4 373 aaKnown RBP11.05□□□□□ -0.64
SHPRH-206ENST00000438092 TMEM106CQ9BVX2 250 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 IGSF1Q8N6C5 1336 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 PALMO75781 387 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 CHEK2O96017 543 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 EGFL8Q99944 293 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 KLHL11Q9NVR0 708 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 RASIP1Q5U651 963 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 CLCA2Q9UQC9 943 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 CPDO75976 1380 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 CFAP74Q9C0B2 1584 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 ASMTLO95671 621 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 KRT31Q15323 416 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 NSUN6Q8TEA1 469 aaKnown RBP11.05□□□□□ -0.64
SHPRH-206ENST00000438092 STRBPQ96SI9 672 aaKnown RBP11.05□□□□□ -0.64
SHPRH-206ENST00000438092 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.05□□□□□ -0.643e-7■■■□□ 18.4
SHPRH-206ENST00000438092 PIN4Q9Y237 131 aaKnown RBP11.05□□□□□ -0.64
SHPRH-206ENST00000438092 JRKLQ9Y4A0 524 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 USP6P35125 1406 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 MB21D1Q8N884 522 aa11.05□□□□□ -0.64
SHPRH-206ENST00000438092 FAF1Q9UNN5 650 aaPredicted RBP11.05□□□□□ -0.64
SHPRH-206ENST00000438092 A8MXQ7 604 aa11.04□□□□□ -0.64
SHPRH-206ENST00000438092 TJP3O95049 919 aa11.04□□□□□ -0.64
SHPRH-206ENST00000438092 CCNE1P24864 410 aa11.04□□□□□ -0.64
SHPRH-206ENST00000438092 FMO2Q99518 471 aa11.04□□□□□ -0.64
SHPRH-206ENST00000438092 THAP9Q9H5L6 903 aa11.04□□□□□ -0.64
SHPRH-206ENST00000438092 FAN1Q9Y2M0 1017 aa11.04□□□□□ -0.64
SHPRH-206ENST00000438092 LDHAP00338 332 aaKnown RBP11.04□□□□□ -0.64
SHPRH-206ENST00000438092 PPARGP37231 505 aaPredicted RBP11.04□□□□□ -0.64
SHPRH-206ENST00000438092 CENPUQ71F23 418 aa11.04□□□□□ -0.64
SHPRH-206ENST00000438092 STAP2Q9UGK3 403 aa11.04□□□□□ -0.64
SHPRH-206ENST00000438092 NFU1Q9UMS0 254 aa11.04□□□□□ -0.64
SHPRH-206ENST00000438092 ADGRL2O95490 1459 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms