RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 OMA1Q96E52 524 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 CLMNQ96JQ2 1002 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 MXD3Q9BW11 206 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 CCDC87Q9NVE4 849 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 NOS1P29475 1434 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 DDX39AO00148 427 aaKnown RBP12.27□□□□□ -0.45
PTCH1-209ENST00000437951 PPP1R37O75864 691 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 SLC4A1P02730 911 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 CEP72Q9P209 647 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 STX7O15400 261 aaKnown RBP12.27□□□□□ -0.45
PTCH1-209ENST00000437951 MYBL1P10243 752 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 BRAFP15056 766 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 PCYOX1LQ8NBM8 494 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 RNF217Q8TC41 542 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
PTCH1-209ENST00000437951 ANGPT2O15123 496 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 EPHB1P54762 984 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 FAM133AQ8N9E0 248 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 ZNF473Q8WTR7 871 aaKnown RBP12.26□□□□□ -0.45
PTCH1-209ENST00000437951 KPNA4O00629 521 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-209ENST00000437951 RAPGEF3O95398 923 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 FAM107AO95990 144 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 HIBADHP31937 336 aaKnown RBP12.26□□□□□ -0.45
PTCH1-209ENST00000437951 CORO7P57737 925 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 PPARAQ07869 468 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 RABGAP1LQ5R372 815 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 CCDC80Q76M96 950 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 ACSBG1Q96GR2 724 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 WNT8AQ9H1J5 351 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 EPC1Q9H2F5 836 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 STK32BQ9NY57 414 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 PFASO15067 1338 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 GSPT1P15170 499 aaKnown RBP12.26□□□□□ -0.45
PTCH1-209ENST00000437951 RRM2BQ7LG56 351 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 RIBC1Q8N443 379 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-209ENST00000437951 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-209ENST00000437951 YY1P25490 414 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 CIITAP33076 1130 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 USP14P54578 494 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 FAM47EQ6ZV65 393 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 LONP2Q86WA8 852 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 FANCBQ8NB91 859 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 SGSM3Q96HU1 749 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 RNF26Q9BY78 433 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-209ENST00000437951 FOXP3Q9BZS1 431 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 NDEL1Q9GZM8 345 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 TRPC7Q9HCX4 862 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 RHBDL2Q9NX52 303 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 SLC8A2Q9UPR5 921 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 TSTA3Q13630 321 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-209ENST00000437951 CCDC142Q17RM4 750 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 IKBIPQ70UQ0 350 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 NLRP4Q96MN2 994 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 DDX56Q9NY93 547 aaKnown RBP12.26□□□□□ -0.45
PTCH1-209ENST00000437951 CFAP69A5D8W1 941 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 SAC3D1A6NKF1 404 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 TRIP4Q15650 581 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-209ENST00000437951 SPATA5Q8NB90 893 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 ZFYVE19Q96K21 471 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 OSBPL5Q9H0X9 879 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-209ENST00000437951 RANBP17Q9H2T7 1088 aaKnown RBP12.26□□□□□ -0.45
PTCH1-209ENST00000437951 ATAD3AQ9NVI7 634 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 PCDHA5Q9Y5H7 936 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 RNF123Q5XPI4 1314 aa12.26□□□□□ -0.45
PTCH1-209ENST00000437951 NFIBO00712 420 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 CALB1P05937 261 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 POLR2MP0CAP2 368 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 TRIM49P0CI25 452 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 TRIM49CP0CI26 452 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 DPCR1Q3MIW9 517 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 DPY19L2Q6NUT2 758 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 STAMQ92783 540 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 LRRC39Q96DD0 335 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 CAPN1P07384 714 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 WAPLQ7Z5K2 1190 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 PASD1Q8IV76 773 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 ABHD8Q96I13 439 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 AP1M1Q9BXS5 423 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 RUBCNLQ9H714 662 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 SAP30BPQ9UHR5 308 aaKnown RBP12.25□□□□□ -0.45
PTCH1-209ENST00000437951 CTCFP49711 727 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-209ENST00000437951 XKR9Q5GH70 373 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 TRPM8Q7Z2W7 1104 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 CARD9Q9H257 536 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 NRBP2Q9NSY0 501 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 ABHD10Q9NUJ1 306 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 FMNL1O95466 1100 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-209ENST00000437951 POLGP54098 1239 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-209ENST00000437951 TFDP2Q14188 446 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 ARHGEF16Q5VV41 709 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 CALN1Q9BXU9 219 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 RAPGEF6Q8TEU7 1601 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 TSPY1Q01534 308 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 ELMSAN1Q6PJG2 1045 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 FAM193BQ96PV7 902 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-209ENST00000437951 NSFL1CQ9UNZ2 370 aaKnown RBP12.25□□□□□ -0.45
PTCH1-209ENST00000437951 TRIM24O15164 1050 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 PDE8AO60658 829 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 PTPROQ16827 1216 aa12.25□□□□□ -0.45
PTCH1-209ENST00000437951 OTUD7BQ6GQQ9 843 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms