RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 SLC44A3Q8N4M1 653 aa18.71■□□□□ 0.59
HMGN1P19-201ENST00000436976 GPR152Q8TDT2 470 aa18.71■□□□□ 0.59
HMGN1P19-201ENST00000436976 SLC9A2Q9UBY0 812 aa18.71■□□□□ 0.59
HMGN1P19-201ENST00000436976 CDV3Q9UKY7 258 aaKnown RBP18.71■□□□□ 0.59
HMGN1P19-201ENST00000436976 CTSAP10619 480 aa18.7■□□□□ 0.58
HMGN1P19-201ENST00000436976 SRFP11831 508 aa18.7■□□□□ 0.58
HMGN1P19-201ENST00000436976 TGM1P22735 817 aa18.7■□□□□ 0.58
HMGN1P19-201ENST00000436976 STAT5BP51692 787 aa18.7■□□□□ 0.58
HMGN1P19-201ENST00000436976 ECHDC2Q86YB7 292 aa18.7■□□□□ 0.58
HMGN1P19-201ENST00000436976 TNPO1Q92973 898 aaKnown RBP18.7■□□□□ 0.58
HMGN1P19-201ENST00000436976 TMEM169Q96HH4 297 aa18.7■□□□□ 0.58
HMGN1P19-201ENST00000436976 FOXQ1Q9C009 403 aa18.7■□□□□ 0.58
HMGN1P19-201ENST00000436976 SENP2Q9HC62 589 aa18.7■□□□□ 0.58
HMGN1P19-201ENST00000436976 SPEGQ15772 3267 aa18.69■□□□□ 0.58
HMGN1P19-201ENST00000436976 GPR32O75388 356 aa18.69■□□□□ 0.58
HMGN1P19-201ENST00000436976 CRYBB1P53674 252 aaPredicted RBP18.69■□□□□ 0.58
HMGN1P19-201ENST00000436976 PDE1AP54750 535 aa18.69■□□□□ 0.58
HMGN1P19-201ENST00000436976 ACTR2P61160 394 aa18.69■□□□□ 0.58
HMGN1P19-201ENST00000436976 HELQQ8TDG4 1101 aa18.69■□□□□ 0.58
HMGN1P19-201ENST00000436976 BCL7CQ8WUZ0 217 aaPredicted RBP18.69■□□□□ 0.58
HMGN1P19-201ENST00000436976 CUL5Q93034 780 aa18.69■□□□□ 0.58
HMGN1P19-201ENST00000436976 RTKNQ9BST9 563 aa18.69■□□□□ 0.58
HMGN1P19-201ENST00000436976 KRT23Q9C075 422 aa18.69■□□□□ 0.58
HMGN1P19-201ENST00000436976 JADE2Q9NQC1 790 aa18.69■□□□□ 0.58
HMGN1P19-201ENST00000436976 ZFYVE26Q68DK2 2539 aa18.69■□□□□ 0.58
HMGN1P19-201ENST00000436976 ZZEF1O43149 2961 aa18.69■□□□□ 0.58
HMGN1P19-201ENST00000436976 PRR5-ARHGAP8B1AHC4 643 aa18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 ZBTB42B2RXF5 422 aa18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 ARHGAP8P85298 464 aa18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 BMS1Q14692 1282 aaKnown RBP18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 WTAPQ15007 396 aa18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 ZNF598Q86UK7 904 aaKnown RBP18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 TICAM2Q86XR7 235 aa18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 GPR161Q8N6U8 529 aaKnown RBP18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 TMEM87AQ8NBN3 555 aa18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 RNF169Q8NCN4 708 aa18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 PJA1Q8NG27 643 aa18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 CHAMP1Q96JM3 812 aa18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 MYADMQ96S97 322 aa18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 VN1R3Q9BXE9 311 aa18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 ARHGEF3Q9NR81 526 aa18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 PCDHB15Q9Y5E8 787 aa18.68■□□□□ 0.58
HMGN1P19-201ENST00000436976 ANKRD11Q6UB99 2663 aaPredicted RBP18.67■□□□□ 0.58
HMGN1P19-201ENST00000436976 SPTLC1O15269 473 aa18.67■□□□□ 0.58
HMGN1P19-201ENST00000436976 VTNP04004 478 aa18.67■□□□□ 0.58
HMGN1P19-201ENST00000436976 ALDH7A1P49419 539 aaKnown RBP18.67■□□□□ 0.58
HMGN1P19-201ENST00000436976 CLCN4P51793 760 aa18.67■□□□□ 0.58
HMGN1P19-201ENST00000436976 LMNB2Q03252 620 aa18.67■□□□□ 0.58
HMGN1P19-201ENST00000436976 TROAPQ12815 778 aa18.67■□□□□ 0.58
HMGN1P19-201ENST00000436976 GIT2Q14161 759 aa18.67■□□□□ 0.58
HMGN1P19-201ENST00000436976 PTPN14Q15678 1187 aa18.67■□□□□ 0.58
HMGN1P19-201ENST00000436976 C15orf39Q6ZRI6 1047 aa18.67■□□□□ 0.58
HMGN1P19-201ENST00000436976 DDX53Q86TM3 631 aaKnown RBP18.67■□□□□ 0.58
HMGN1P19-201ENST00000436976 EPS15L1Q9UBC2 864 aa18.67■□□□□ 0.58
HMGN1P19-201ENST00000436976 ATG7O95352 703 aa18.66■□□□□ 0.58
HMGN1P19-201ENST00000436976 GBP2P32456 591 aaPredicted RBP18.66■□□□□ 0.58
HMGN1P19-201ENST00000436976 POLGP54098 1239 aaPredicted RBP18.66■□□□□ 0.58
HMGN1P19-201ENST00000436976 ZNF528Q3MIS6 628 aa18.66■□□□□ 0.58
HMGN1P19-201ENST00000436976 PPFIBP1Q86W92 1011 aa18.66■□□□□ 0.58
HMGN1P19-201ENST00000436976 IGSF21Q96ID5 467 aa18.66■□□□□ 0.58
HMGN1P19-201ENST00000436976 PARD6AQ9NPB6 346 aa18.66■□□□□ 0.58
HMGN1P19-201ENST00000436976 KCNH7Q9NS40 1196 aa18.66■□□□□ 0.58
HMGN1P19-201ENST00000436976 IGKV6D-21A0A0A0MT36 114 aa18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 SPDYE4A6NLX3 237 aa18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 MAFGO15525 162 aa18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 HBP1O60381 514 aa18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 ZC3H11AO75152 810 aaKnown RBP eCLIP18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 HOXB3P14651 431 aaPredicted RBP18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 MFAP1P55081 439 aaKnown RBP18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 KLHL5Q96PQ7 755 aa18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 CNNM2Q9H8M5 875 aa18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 WDR6Q9NNW5 1121 aaKnown RBP18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 SMG5Q9UPR3 1016 aaKnown RBP18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 WDFY3Q8IZQ1 3526 aa18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 COL1A2P08123 1366 aa18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 CEP295Q9C0D2 2601 aa18.65■□□□□ 0.58
HMGN1P19-201ENST00000436976 C22orf31O95567 290 aa18.64■□□□□ 0.57
HMGN1P19-201ENST00000436976 CNPP09543 421 aaKnown RBP18.64■□□□□ 0.57
HMGN1P19-201ENST00000436976 SDSP20132 328 aa18.64■□□□□ 0.57
HMGN1P19-201ENST00000436976 ITGB3BPQ13352 177 aaPredicted RBP18.64■□□□□ 0.57
HMGN1P19-201ENST00000436976 NONOQ15233 471 aaKnown RBP eCLIP18.64■□□□□ 0.57
HMGN1P19-201ENST00000436976 UBE2SQ16763 222 aa18.64■□□□□ 0.57
HMGN1P19-201ENST00000436976 IMMTQ16891 758 aaKnown RBP18.64■□□□□ 0.57
HMGN1P19-201ENST00000436976 PPM1JQ5JR12 505 aa18.64■□□□□ 0.57
HMGN1P19-201ENST00000436976 DCLRE1AQ6PJP8 1040 aa18.64■□□□□ 0.57
HMGN1P19-201ENST00000436976 ZBTB44Q8NCP5 570 aa18.64■□□□□ 0.57
HMGN1P19-201ENST00000436976 MRPL9Q9BYD2 267 aaKnown RBP18.64■□□□□ 0.57
HMGN1P19-201ENST00000436976 USP18Q9UMW8 372 aa18.64■□□□□ 0.57
HMGN1P19-201ENST00000436976 NFASCO94856 1347 aa18.64■□□□□ 0.57
HMGN1P19-201ENST00000436976 A0A0U1RQF3 1178 aa18.63■□□□□ 0.57
HMGN1P19-201ENST00000436976 ZSCAN20P17040 1043 aaPredicted RBP18.63■□□□□ 0.57
HMGN1P19-201ENST00000436976 ATP4AP20648 1035 aa18.63■□□□□ 0.57
HMGN1P19-201ENST00000436976 SLC26A2P50443 739 aa18.63■□□□□ 0.57
HMGN1P19-201ENST00000436976 STARD6P59095 220 aa18.63■□□□□ 0.57
HMGN1P19-201ENST00000436976 CCDC60Q8IWA6 550 aaPredicted RBP18.63■□□□□ 0.57
HMGN1P19-201ENST00000436976 ST13P5Q8NFI4 369 aaPredicted RBP18.63■□□□□ 0.57
HMGN1P19-201ENST00000436976 CMASQ8NFW8 434 aaPredicted RBP18.63■□□□□ 0.57
HMGN1P19-201ENST00000436976 EPC1Q9H2F5 836 aa18.63■□□□□ 0.57
HMGN1P19-201ENST00000436976 DAXXQ9UER7 740 aaPredicted RBP18.63■□□□□ 0.57
HMGN1P19-201ENST00000436976 FBXO4Q9UKT5 387 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms