RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 PACSIN2Q9UNF0 486 aaPredicted RBP20.27■□□□□ 0.84
CLK1-205ENST00000434813 FRMD4BQ9Y2L6 1034 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 DAAM1Q9Y4D1 1078 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 MYH11P35749 1972 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 ARHGEF35A5YM69 484 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 ITGB5P18084 799 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 MRPS25P82663 173 aaKnown RBP20.27■□□□□ 0.84
CLK1-205ENST00000434813 GHRHRQ02643 423 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 MAPK7Q13164 816 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 NNTQ13423 1086 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 SLC9A9Q8IVB4 645 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 TAF4BQ92750 862 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 ZFP91Q96JP5 570 aaPredicted RBP20.27■□□□□ 0.84
CLK1-205ENST00000434813 GDF3Q9NR23 364 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 CCPG1Q9ULG6 757 aa20.27■□□□□ 0.84
CLK1-205ENST00000434813 ZNF536O15090 1300 aa20.27■□□□□ 0.83
CLK1-205ENST00000434813 F8VZ95 297 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 ACTN2P35609 894 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 DNA2P51530 1060 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 RPS6KA1Q15418 735 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 ZSCAN26Q16670 478 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 NIPA1Q7RTP0 329 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 KSR1Q8IVT5 923 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 IFT20Q8IY31 132 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 GOLGA6L1Q8N7Z2 621 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 BANK1Q8NDB2 785 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 AFAP1L1Q8TED9 768 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 HINFPQ9BQA5 517 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 DDX3XO00571 662 aaKnown RBP eCLIP20.26■□□□□ 0.83
CLK1-205ENST00000434813 HIP1RO75146 1068 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 KIF4AO95239 1232 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 H2AFZP0C0S5 128 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 CAPN2P17655 700 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 TNFAIP1Q13829 316 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 MYBPC2Q14324 1141 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 H2AFVQ71UI9 128 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 DAW1Q8N136 415 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 USP38Q8NB14 1042 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 NLGN2Q8NFZ4 835 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 OLIG1Q8TAK6 271 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 AGBL1Q96MI9 1066 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 STK33Q9BYT3 514 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 GJA3Q9Y6H8 435 aa20.26■□□□□ 0.83
CLK1-205ENST00000434813 RPS6KA5O75582 802 aa20.25■□□□□ 0.83
CLK1-205ENST00000434813 SOX5P35711 763 aa20.25■□□□□ 0.83
CLK1-205ENST00000434813 CYP2J2P51589 502 aa20.25■□□□□ 0.83
CLK1-205ENST00000434813 ZNF280AP59817 542 aaPredicted RBP20.25■□□□□ 0.83
CLK1-205ENST00000434813 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
CLK1-205ENST00000434813 FMNL3Q8IVF7 1028 aa20.25■□□□□ 0.83
CLK1-205ENST00000434813 TPCN2Q8NHX9 752 aa20.25■□□□□ 0.83
CLK1-205ENST00000434813 RIN2Q8WYP3 895 aaPredicted RBP20.25■□□□□ 0.83
CLK1-205ENST00000434813 PBKQ96KB5 322 aa20.25■□□□□ 0.83
CLK1-205ENST00000434813 TMEM59LQ9UK28 342 aa20.25■□□□□ 0.83
CLK1-205ENST00000434813 EVI5O60447 810 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 CLSTN1O94985 981 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 HEXIM1O94992 359 aaKnown RBP20.24■□□□□ 0.83
CLK1-205ENST00000434813 CBWD6Q4V339 395 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 CBWD3Q5JTY5 395 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 CBWD5Q5RIA9 395 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 KCNH7Q9NS40 1196 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 COL20A1Q9P218 1284 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 FZD9O00144 591 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 GLI1P08151 1106 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 INPP5BP32019 993 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 NOP2P46087 812 aaKnown RBP20.24■□□□□ 0.83
CLK1-205ENST00000434813 GMPSP49915 693 aaPredicted RBP20.24■□□□□ 0.83
CLK1-205ENST00000434813 TNNC1P63316 161 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 LEKR1Q6ZMV7 388 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 MIER3Q7Z3K6 550 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 SLFN11Q7Z7L1 901 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 MICALL2Q8IY33 904 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 SLC30A5Q8TAD4 765 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 CLEC4DQ8WXI8 215 aa20.24■□□□□ 0.83
CLK1-205ENST00000434813 INTS2Q9H0H0 1204 aaKnown RBP20.24■□□□□ 0.83
CLK1-205ENST00000434813 NFIBO00712 420 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 KCNK3O14649 394 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 ZBTB48P10074 688 aaPredicted RBP20.23■□□□□ 0.83
CLK1-205ENST00000434813 MAPTP10636 758 aaKnown RBP20.23■□□□□ 0.83
CLK1-205ENST00000434813 RFX1P22670 979 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 UTRNP46939 3433 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 NPEPPSP55786 919 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 MYL7Q01449 175 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 BFSP1Q12934 665 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 PAK2Q13177 524 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 ALCAMQ13740 583 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 PADI6Q6TGC4 694 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 MCF2L2Q86YR7 1114 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 IL31RAQ8NI17 732 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 LNX1Q8TBB1 728 aaPredicted RBP20.23■□□□□ 0.83
CLK1-205ENST00000434813 TMEM174Q8WUU8 243 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 HOOK2Q96ED9 719 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 SH3GL2Q99962 352 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 SYT11Q9BT88 431 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 ZNF341Q9BYN7 854 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 APEX2Q9UBZ4 518 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 DBR1Q9UK59 544 aaKnown RBP20.23■□□□□ 0.83
CLK1-205ENST00000434813 DNAJC12Q9UKB3 198 aa20.23■□□□□ 0.83
CLK1-205ENST00000434813 NCANO14594 1321 aa20.22■□□□□ 0.83
CLK1-205ENST00000434813 DDX39AO00148 427 aaKnown RBP20.22■□□□□ 0.83
CLK1-205ENST00000434813 WDR46O15213 610 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms