RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 TRIM49BA6NDI0 452 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 B4DLN1 442 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 NCK2O43639 380 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 LINGO3P0C6S8 592 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 KIF11P52732 1056 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 RCAN1P53805 252 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 PMS1P54277 932 aaKnown RBP8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 CCNA1P78396 465 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 ATP2C1P98194 919 aaPredicted RBP8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 SLC9C1Q4G0N8 1177 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 SBK1Q52WX2 424 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 ERMARDQ5T6L9 678 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 CPLX4Q7Z7G2 160 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 RNF10Q8N5U6 811 aaKnown RBP8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 DRAXINQ8NBI3 349 aaPredicted RBP8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 SLAIN1Q8ND83 568 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 LRRC45Q96CN5 670 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 CHMP6Q96FZ7 201 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 MS4A14Q96JA4 679 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 PSMB7Q99436 277 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 TUBGCP2Q9BSJ2 902 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 R3HDMLQ9H3Y0 253 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 ARMT1Q9H993 441 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 CNOT10Q9H9A5 744 aaKnown RBP8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 SRRDQ9UH36 339 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 MYPNQ86TC9 1320 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 FAM205CA6NFA0 338 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 FAM196BA6NMK8 535 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 USP17L15C9J2P7 530 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 USP17L13C9JLJ4 530 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 USP17L11C9JVI0 530 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 USP17L18D6R9N7 530 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 USP17L22D6RA61 530 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 USP17L17D6RBQ6 530 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 USP17L19D6RCP7 530 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 USP17L20D6RJB6 530 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 MPHOSPH10O00566 681 aaKnown RBP8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 ASAP2O43150 1006 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 ATP2C2O75185 946 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 LUC7L3O95232 432 aaKnown RBP8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 GH2P01242 217 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 PLEKP08567 350 aaPredicted RBP8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 CCND1P24385 295 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 PSMC4P43686 418 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 KLK7P49862 253 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 HMGCS2P54868 508 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 GABPAQ06546 454 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 USP17L24Q0WX57 530 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 MTMR2Q13614 643 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 CUL1Q13616 776 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 RTN1Q16799 776 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 TTI2Q6NXR4 508 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 RAET1EQ8TD07 263 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 LPAR1Q92633 364 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 BORCS6Q96GS4 357 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 ANKRD27Q96NW4 1050 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 INPP4AQ96PE3 977 aaPredicted RBP8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 ZNF317Q96PQ6 595 aaPredicted RBP8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 MAGEC2Q9UBF1 373 aaPredicted RBP8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 CPA4Q9UI42 421 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 SALL4Q9UJQ4 1053 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 TMEM59LQ9UK28 342 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 SYNPO2Q9UMS6 1093 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 PCDHGC5Q9Y5F6 944 aa8.38□□□□□ -1.07
CNKSR3-202ENST00000433165 TNPO2O14787 897 aaKnown RBP8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 RAD51CO43502 376 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 RTN3O95197 1032 aaPredicted RBP8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 GDF11O95390 407 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 NEFHP12036 1026 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 FERP16591 822 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 EARS2Q5JPH6 523 aaKnown RBP8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 THEMIS2Q5TEJ8 643 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 C12orf60Q5U649 245 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 CWF19L1Q69YN2 538 aaKnown RBP8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 SLC30A9Q6PML9 568 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 PIGWQ7Z7B1 504 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 ANKS4BQ8N8V4 417 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 SHISA4Q96DD7 197 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 MTMR8Q96EF0 704 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 XPO6Q96QU8 1125 aaKnown RBP8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 KRT12Q99456 494 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 FAM129AQ9BZQ8 928 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 NUCKS1Q9H1E3 243 aaKnown RBP8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 DNAJC18Q9H819 358 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 PANK4Q9NVE7 773 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 MORF4L1Q9UBU8 362 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 ROBO3Q96MS0 1386 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 WNT7AO00755 349 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 DIAPH2O60879 1101 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 CLTAP09496 248 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 MAPK4P31152 587 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 SHMT1P34896 483 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 CTNNA1P35221 906 aaKnown RBP8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 ROR2Q01974 943 aaKnown RBP8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 IRF5Q13568 498 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 MTMR3Q13615 1198 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 TRADDQ15628 312 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 ALX1Q15699 326 aa8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 IFI16Q16666 785 aaKnown RBP8.37□□□□□ -1.07
CNKSR3-202ENST00000433165 MIIPQ5JXC2 388 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms