RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 ZCRB1Q8TBF4 217 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 DDX17Q92841 729 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 TRIM51Q9BSJ1 452 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 THTPAQ9BU02 230 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 TRIM15Q9C019 465 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 UBE2TQ9NPD8 197 aaPredicted RBP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 RAB21Q9UL25 225 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 SYF2O95926 243 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 GOLGA8HP0CJ92 632 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 TARSP26639 723 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 POLR2BP30876 1174 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 ARL4CP56559 192 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 DSG1Q02413 1049 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 KLHL38Q2WGJ6 581 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 DDX42Q86XP3 938 aaKnown RBP eCLIP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 RNF34Q969K3 372 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 NMD3Q96D46 503 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 CCT7Q99832 543 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 ISCUQ9H1K1 167 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 DIP2BQ9P265 1576 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 CCDC195A0A1B0GUA6 201 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 LPXNO60711 386 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 LIFRP42702 1097 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 CACNA2D1P54289 1103 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 PABPC4Q13310 644 aaKnown RBP eCLIP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 THOC5Q13769 683 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 TRAPPC11Q7Z392 1133 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 CCDC125Q86Z20 511 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 SLFN12Q8IYM2 578 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 UBN2Q6ZU65 1347 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 CDH16O75309 829 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 PECAM1P16284 738 aaPredicted RBP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 CYP4A11Q02928 519 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 MYLK4Q86YV6 388 aaPredicted RBP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 PROCA1Q8NCQ7 364 aaPredicted RBP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 IL17REQ8NFR9 667 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 TRABDQ9H4I3 376 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 DCLRE1BQ9H816 532 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 ALG13Q9NP73 1137 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 IL1RAPL1Q9NZN1 696 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 SENP1Q9P0U3 644 aa11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 DDX20Q9UHI6 824 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-203ENST00000432907 CDC25CP30307 473 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 STAT4Q14765 748 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 TRIM16LQ309B1 348 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 MDH1BQ5I0G3 518 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 TMC4Q7Z404 712 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 CATSPER2Q96P56 530 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 ALDH8A1Q9H2A2 487 aaPredicted RBP11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 SERPINI2O75830 405 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 SEC24DO94855 1032 aaPredicted RBP11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 KRT19P08727 400 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 GHRP10912 638 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 HP1BP3Q5SSJ5 553 aaPredicted RBP11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 TRIM59Q8IWR1 403 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 MRPL47Q9HD33 250 aaKnown RBP11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 ADA2Q9NZK5 511 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 ZSWIM5Q9P217 1185 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 TLK1Q9UKI8 766 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 CAMSAP1Q5T5Y3 1602 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 ADGRB3O60242 1522 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 ATP7BP35670 1465 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 B2RBV5 119 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 GAS7O60861 476 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 ODR4Q5SWX8 454 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 MFSD4BQ5TF39 518 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 HEMGNQ9BXL5 484 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 RANBP17Q9H2T7 1088 aaKnown RBP11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 PSTPIP2Q9H939 334 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 CNGB3Q9NQW8 809 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 SEPT10Q9P0V9 454 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 KIF28PB7ZC32 967 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 XPO1O14980 1071 aaKnown RBP11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 KCNQ3O43525 872 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 PDE8AO60658 829 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 KRT38O76015 456 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 UBOX5O94941 541 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 KRT4P19013 534 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 HOXA7P31268 230 aaPredicted RBP11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 USH1GQ495M9 461 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 GJC2Q5T442 439 aaPredicted RBP11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 THEMIS2Q5TEJ8 643 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 SPOPLQ6IQ16 392 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 ZNF483Q8TF39 744 aaPredicted RBP11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 SNF8Q96H20 258 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 MRPL40Q9NQ50 206 aaKnown RBP11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 MID2Q9UJV3 735 aa11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 TTC7AQ9ULT0 858 aaPredicted RBP11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 SMG5Q9UPR3 1016 aaKnown RBP11.12□□□□□ -0.63
PKNOX1-203ENST00000432907 FAM47DPA6NHR8 397 aa11.11□□□□□ -0.63
PKNOX1-203ENST00000432907 MAP2K7O14733 419 aa11.11□□□□□ -0.63
PKNOX1-203ENST00000432907 AHCYL1O43865 530 aa11.11□□□□□ -0.63
PKNOX1-203ENST00000432907 PRAMEP78395 509 aa11.11□□□□□ -0.63
PKNOX1-203ENST00000432907 OCRLQ01968 901 aa11.11□□□□□ -0.63
PKNOX1-203ENST00000432907 NSMFQ6X4W1 530 aa11.11□□□□□ -0.63
PKNOX1-203ENST00000432907 TRIM50Q86XT4 487 aa11.11□□□□□ -0.63
PKNOX1-203ENST00000432907 DEPDC1BQ8WUY9 529 aa11.11□□□□□ -0.63
PKNOX1-203ENST00000432907 ORAI2Q96SN7 254 aa11.11□□□□□ -0.63
PKNOX1-203ENST00000432907 SH3GL2Q99962 352 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms