RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 RASSF8Q8NHQ8 419 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 TCP11Q8WWU5 503 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 RAD54LQ92698 747 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 TMEM143Q96AN5 459 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 RUSC1Q9BVN2 902 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 OSBPL7Q9BZF2 842 aa16■□□□□ 0.15
CSTF3-202ENST00000431742 SUCLA2Q9P2R7 463 aaPredicted RBP16■□□□□ 0.15
CSTF3-202ENST00000431742 A0A1W2PQ27 194 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 A0A1W2PQ64 194 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 A0A1W2PQD8 194 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 NBNO60934 754 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 CMA1P23946 247 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 ARL2P36404 184 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 DNM2P50570 870 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 GPC3P51654 580 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 EPHB4P54760 987 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 MDM2Q00987 491 aaPredicted RBP15.99■□□□□ 0.15
CSTF3-202ENST00000431742 PPIGQ13427 754 aaKnown RBP eCLIP15.99■□□□□ 0.151e-19■□□□□ 10.2
CSTF3-202ENST00000431742 FBXO47Q5MNV8 452 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 RRAGBQ5VZM2 374 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 RINT1Q6NUQ1 792 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 C1orf186Q6ZWK4 172 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 PSPC1Q8WXF1 523 aaKnown RBP15.99■□□□□ 0.15
CSTF3-202ENST00000431742 LARP4BQ92615 738 aaKnown RBP15.99■□□□□ 0.15
CSTF3-202ENST00000431742 LBHD1Q9BQE6 289 aaPredicted RBP15.99■□□□□ 0.15
CSTF3-202ENST00000431742 CELF4Q9BZC1 486 aaKnown RBP15.99■□□□□ 0.15
CSTF3-202ENST00000431742 ADAMTS10Q9H324 1103 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 IL23AQ9NPF7 189 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 AKT3Q9Y243 479 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 HPSEQ9Y251 543 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 SQORQ9Y6N5 450 aa15.99■□□□□ 0.15
CSTF3-202ENST00000431742 RANBP2P49792 3224 aaKnown RBP15.98■□□□□ 0.15
CSTF3-202ENST00000431742 M0QZ92 97 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 GUCY2CP25092 1073 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 STAT6P42226 847 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 NLRP11P59045 1033 aaKnown RBP15.98■□□□□ 0.15
CSTF3-202ENST00000431742 KIZQ2M2Z5 673 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 CLEC17AQ6ZS10 378 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 C16orf59Q7L2K0 433 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 ZNF410Q86VK4 478 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 TMEM87AQ8NBN3 555 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 ASAP3Q8TDY4 903 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 PRPF31Q8WWY3 499 aaKnown RBP15.98■□□□□ 0.15
CSTF3-202ENST00000431742 GBF1Q92538 1859 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 POLR3FQ9H1D9 316 aaPredicted RBP15.98■□□□□ 0.15
CSTF3-202ENST00000431742 PRO3102Q9H379 93 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 CDHR5Q9HBB8 845 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 GPRC5CQ9NQ84 441 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 FAM13BQ9NYF5 915 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 KCND2Q9NZV8 630 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 COL4A3BPQ9Y5P4 624 aa15.98■□□□□ 0.15
CSTF3-202ENST00000431742 PFKMP08237 780 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 CRYBB1P53674 252 aaPredicted RBP15.97■□□□□ 0.15
CSTF3-202ENST00000431742 CDC42EP1Q00587 391 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 LAMTOR4Q0VGL1 99 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 MAPK7Q13164 816 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 MCM6Q14566 821 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 LPIN1Q14693 890 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 ARSHQ5FYA8 562 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 RHPN2Q8IUC4 686 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 KSR1Q8IVT5 923 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 DAW1Q8N136 415 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 PDILTQ8N807 584 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 TMEM40Q8WWA1 233 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 PPP1R16BQ96T49 567 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 TIPINQ9BVW5 301 aa15.97■□□□□ 0.15
CSTF3-202ENST00000431742 RBAK-RBAKDNI3L0D1 243 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 ASAP2O43150 1006 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 SSBP05455 408 aaKnown RBP eCLIP15.96■□□□□ 0.15
CSTF3-202ENST00000431742 PFKFB1P16118 471 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 GLRA2P23416 452 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 BMP8BP34820 402 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 CAPSQ13938 189 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 MXD4Q14582 209 aaPredicted RBP15.96■□□□□ 0.15
CSTF3-202ENST00000431742 PLEKHG4Q58EX7 1191 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 PRPF38BQ5VTL8 546 aaKnown RBP15.96■□□□□ 0.15
CSTF3-202ENST00000431742 TSHZ1Q6ZSZ6 1077 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 GPBP1Q86WP2 473 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 RPUSD2Q8IZ73 545 aaKnown RBP15.96■□□□□ 0.15
CSTF3-202ENST00000431742 USP38Q8NB14 1042 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 OSMRQ99650 979 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 PANK2Q9BZ23 570 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 CUEDC2Q9H467 287 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 IFT122Q9HBG6 1241 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 KCNH3Q9ULD8 1083 aa15.96■□□□□ 0.15
CSTF3-202ENST00000431742 A0A087WZ62 844 aa15.95■□□□□ 0.14
CSTF3-202ENST00000431742 A0A1B0GVL5 298 aa15.95■□□□□ 0.14
CSTF3-202ENST00000431742 POLR2DO15514 142 aaKnown RBP15.95■□□□□ 0.14
CSTF3-202ENST00000431742 GHRP10912 638 aa15.95■□□□□ 0.14
CSTF3-202ENST00000431742 DARSP14868 501 aaKnown RBP15.95■□□□□ 0.14
CSTF3-202ENST00000431742 POU5F1BQ06416 359 aa15.95■□□□□ 0.14
CSTF3-202ENST00000431742 CSPP1Q1MSJ5 1256 aa15.95■□□□□ 0.14
CSTF3-202ENST00000431742 TCTN1Q2MV58 587 aa15.95■□□□□ 0.14
CSTF3-202ENST00000431742 TMEM240Q5SV17 173 aa15.95■□□□□ 0.14
CSTF3-202ENST00000431742 FAM102BQ5T8I3 360 aa15.95■□□□□ 0.14
CSTF3-202ENST00000431742 PSRC1Q6PGN9 363 aaPredicted RBP15.95■□□□□ 0.14
CSTF3-202ENST00000431742 MAEAQ7L5Y9 396 aa15.95■□□□□ 0.14
CSTF3-202ENST00000431742 DEFB128Q7Z7B8 93 aa15.95■□□□□ 0.14
CSTF3-202ENST00000431742 IFNLR1Q8IU57 520 aaPredicted RBP15.95■□□□□ 0.14
CSTF3-202ENST00000431742 FSIP1Q8NA03 581 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms