RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 ZNF576Q9H609 170 aa15.93■□□□□ 0.14
LAMA4-208ENST00000431543 FBXO2Q9UK22 296 aaPredicted RBP15.93■□□□□ 0.14
LAMA4-208ENST00000431543 LOXHD1Q8IVV2 1947 aa15.93■□□□□ 0.14
LAMA4-208ENST00000431543 A0A1W2PQ27 194 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 A0A1W2PQ64 194 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 A0A1W2PQD8 194 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 LCHNA4D1U4 455 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 M0QZ92 97 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 ENPP3O14638 875 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 EFCAB14O75071 495 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 RPLP2P05387 115 aaKnown RBP15.92■□□□□ 0.14
LAMA4-208ENST00000431543 CA3P07451 260 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 FXR2P51116 673 aaKnown RBP eCLIP15.92■□□□□ 0.14
LAMA4-208ENST00000431543 SPRED2Q7Z698 418 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 C4orf19Q8IY42 314 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 MYOCDQ8IZQ8 938 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 CDX2Q99626 313 aaPredicted RBP15.92■□□□□ 0.14
LAMA4-208ENST00000431543 OSMRQ99650 979 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 PYM1Q9BRP8 204 aaKnown RBP15.92■□□□□ 0.14
LAMA4-208ENST00000431543 ZBED2Q9BTP6 218 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 ADAMTS10Q9H324 1103 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 CYP26B1Q9NR63 512 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 LRWD1Q9UFC0 647 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 PADI3Q9ULW8 664 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 AKT3Q9Y243 479 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 NOC2LQ9Y3T9 749 aaKnown RBP15.92■□□□□ 0.14
LAMA4-208ENST00000431543 KDM3AQ9Y4C1 1321 aa15.92■□□□□ 0.14
LAMA4-208ENST00000431543 MICAL3Q7RTP6 2002 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 IGKV6-21A0A0C4DH24 114 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 TLL1O43897 1013 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 UPP2O95045 317 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 SPATA31C1P0DKV0 1188 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 CMA1P23946 247 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 YWHABP31946 246 aaKnown RBP15.91■□□□□ 0.14
LAMA4-208ENST00000431543 UBA7P41226 1012 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 NLRP11P59045 1033 aaKnown RBP15.91■□□□□ 0.14
LAMA4-208ENST00000431543 LINC01599Q8WXQ3 324 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 APBB2Q92870 758 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 CSRNP2Q9H175 543 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 TMX1Q9H3N1 280 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 ZSWIM4Q9H7M6 989 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 SLC28A3Q9HAS3 691 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 BMP2KQ9NSY1 1161 aaPredicted RBP15.91■□□□□ 0.14
LAMA4-208ENST00000431543 COL6A3P12111 3177 aa15.91■□□□□ 0.14
LAMA4-208ENST00000431543 TMEM265A0A087WTH1 108 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 DKC1O60832 514 aaKnown RBP eCLIP15.9■□□□□ 0.14
LAMA4-208ENST00000431543 MAFO75444 373 aaPredicted RBP15.9■□□□□ 0.14
LAMA4-208ENST00000431543 GJB5O95377 273 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 MBD3O95983 291 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 AMHP03971 560 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 TMOD1P28289 359 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 CRYBB1P53674 252 aaPredicted RBP15.9■□□□□ 0.14
LAMA4-208ENST00000431543 IL17AQ16552 155 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 SKOR2Q2VWA4 1001 aaPredicted RBP15.9■□□□□ 0.14
LAMA4-208ENST00000431543 TPRNQ4KMQ1 711 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 KRT79Q5XKE5 535 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 CCDC73Q6ZRK6 1079 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 USP38Q8NB14 1042 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 RASSF8Q8NHQ8 419 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 MYLIPQ8WY64 445 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 MRPS27Q92552 414 aaKnown RBP15.9■□□□□ 0.14
LAMA4-208ENST00000431543 TOP1MTQ969P6 601 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 CCDC34Q96HJ3 373 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 CEP170P1Q96L14 293 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 CERS4Q9HA82 394 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 ERVK-5Q9HDB9 667 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 CCDC39Q9UFE4 941 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 SQORQ9Y6N5 450 aa15.9■□□□□ 0.14
LAMA4-208ENST00000431543 SLC26A4O43511 780 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 MGEA5O60502 916 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 MED24O75448 989 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 CSDE1O75534 798 aaKnown RBP15.89■□□□□ 0.13
LAMA4-208ENST00000431543 RPS6KA5O75582 802 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 GPC3P51654 580 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 TAP1Q03518 808 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 NFX1Q12986 1120 aaKnown RBP15.89■□□□□ 0.13
LAMA4-208ENST00000431543 PAK2Q13177 524 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 NFKBIBQ15653 356 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 XKR9Q5GH70 373 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 AXDND1Q5T1B0 1012 aaPredicted RBP15.89■□□□□ 0.13
LAMA4-208ENST00000431543 PPP2R2DQ66LE6 453 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 HAUS3Q68CZ6 603 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 CATSPER3Q86XQ3 398 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 KSR1Q8IVT5 923 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 PIGOQ8TEQ8 1089 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 CDK5RAP3Q96JB5 506 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 CLIC6Q96NY7 704 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 MAP7D2Q96T17 732 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 RAD9AQ99638 391 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 PRDM12Q9H4Q4 367 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 LMBRD1Q9NUN5 540 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 SUCLA2Q9P2R7 463 aaPredicted RBP15.89■□□□□ 0.13
LAMA4-208ENST00000431543 ST3GAL5Q9UNP4 418 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 CDH23Q9H251 3354 aa15.89■□□□□ 0.13
LAMA4-208ENST00000431543 LYPLA2O95372 231 aa15.88■□□□□ 0.13
LAMA4-208ENST00000431543 FGFR4P22455 802 aa15.88■□□□□ 0.13
LAMA4-208ENST00000431543 CACNB1Q02641 598 aaPredicted RBP15.88■□□□□ 0.13
LAMA4-208ENST00000431543 ECM1Q16610 540 aa15.88■□□□□ 0.13
LAMA4-208ENST00000431543 RESP18Q5W5W9 173 aa15.88■□□□□ 0.13
LAMA4-208ENST00000431543 OTUD6AQ7L8S5 288 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms