RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 SREK1Q8WXA9 508 aaKnown RBP6.94□□□□□ -1.3
PTPN4-204ENST00000431283 RABGGTAQ92696 567 aa6.94□□□□□ -1.3
PTPN4-204ENST00000431283 SLC7A6OSQ96CW6 309 aaPredicted RBP6.94□□□□□ -1.3
PTPN4-204ENST00000431283 TUBGCP5Q96RT8 1024 aa6.94□□□□□ -1.3
PTPN4-204ENST00000431283 MPHOSPH9Q99550 1183 aa6.94□□□□□ -1.3
PTPN4-204ENST00000431283 CDK11AQ9UQ88 783 aaPredicted RBP6.94□□□□□ -1.3
PTPN4-204ENST00000431283 PTPDC1A2A3K4 754 aa6.93□□□□□ -1.3
PTPN4-204ENST00000431283 RGS3P49796 1198 aa6.93□□□□□ -1.3
PTPN4-204ENST00000431283 TGFB2P61812 414 aa6.93□□□□□ -1.3
PTPN4-204ENST00000431283 ATP2C1P98194 919 aaPredicted RBP6.93□□□□□ -1.3
PTPN4-204ENST00000431283 PRAMEF9Q5VWM5 478 aa6.93□□□□□ -1.3
PTPN4-204ENST00000431283 ANKRD35Q8N283 1001 aa6.93□□□□□ -1.3
PTPN4-204ENST00000431283 RPGRQ92834 1020 aaKnown RBP6.93□□□□□ -1.3
PTPN4-204ENST00000431283 FOXRED1Q96CU9 486 aaPredicted RBP6.93□□□□□ -1.3
PTPN4-204ENST00000431283 MAML3Q96JK9 1138 aa6.93□□□□□ -1.3
PTPN4-204ENST00000431283 SLC6A15Q9H2J7 730 aa6.93□□□□□ -1.3
PTPN4-204ENST00000431283 SYNPO2Q9UMS6 1093 aa6.93□□□□□ -1.3
PTPN4-204ENST00000431283 CTDP1Q9Y5B0 961 aaPredicted RBP6.93□□□□□ -1.3
PTPN4-204ENST00000431283 RBM8AQ9Y5S9 174 aaKnown RBP6.93□□□□□ -1.3
PTPN4-204ENST00000431283 PRLP01236 227 aa6.92□□□□□ -1.3
PTPN4-204ENST00000431283 PIK3R6Q5UE93 754 aa6.92□□□□□ -1.3
PTPN4-204ENST00000431283 KIAA1958Q8N8K9 716 aa6.92□□□□□ -1.3
PTPN4-204ENST00000431283 OR5AN1Q8NGI8 311 aa6.92□□□□□ -1.3
PTPN4-204ENST00000431283 SLITRK6Q9H5Y7 841 aa6.92□□□□□ -1.3
PTPN4-204ENST00000431283 KCMF1Q9P0J7 381 aa6.92□□□□□ -1.3
PTPN4-204ENST00000431283 MAGEL2Q9UJ55 1249 aa6.92□□□□□ -1.3
PTPN4-204ENST00000431283 TNPO3Q9Y5L0 923 aaKnown RBP6.92□□□□□ -1.3
PTPN4-204ENST00000431283 DAPK3O43293 454 aa6.91□□□□□ -1.3
PTPN4-204ENST00000431283 MECP2P51608 486 aaKnown RBP6.91□□□□□ -1.3
PTPN4-204ENST00000431283 BPIFB4P59827 614 aa6.91□□□□□ -1.3
PTPN4-204ENST00000431283 DGCR2P98153 550 aa6.91□□□□□ -1.3
PTPN4-204ENST00000431283 KRT40Q6A162 431 aa6.91□□□□□ -1.3
PTPN4-204ENST00000431283 TIGD7Q6NT04 549 aaPredicted RBP6.91□□□□□ -1.3
PTPN4-204ENST00000431283 ANKRD53Q8N9V6 530 aa6.91□□□□□ -1.3
PTPN4-204ENST00000431283 IL17DQ8TAD2 202 aa6.91□□□□□ -1.3
PTPN4-204ENST00000431283 RPL10LQ96L21 214 aaKnown RBP6.91□□□□□ -1.3
PTPN4-204ENST00000431283 PARPBPQ9NWS1 579 aa6.91□□□□□ -1.3
PTPN4-204ENST00000431283 ING1Q9UK53 422 aaPredicted RBP6.91□□□□□ -1.3
PTPN4-204ENST00000431283 C1SP09871 688 aa6.9□□□□□ -1.3
PTPN4-204ENST00000431283 BCAR1P56945 870 aa6.9□□□□□ -1.3
PTPN4-204ENST00000431283 ADCY1Q08828 1119 aa6.9□□□□□ -1.3
PTPN4-204ENST00000431283 TCIRG1Q13488 830 aa6.9□□□□□ -1.3
PTPN4-204ENST00000431283 TUBA3CQ13748 450 aa6.9□□□□□ -1.3
PTPN4-204ENST00000431283 TUBA3EQ6PEY2 450 aa6.9□□□□□ -1.3
PTPN4-204ENST00000431283 GSPT2Q8IYD1 628 aaKnown RBP6.9□□□□□ -1.3
PTPN4-204ENST00000431283 DYDC2Q96IM9 177 aa6.9□□□□□ -1.3
PTPN4-204ENST00000431283 WDR92Q96MX6 357 aa6.9□□□□□ -1.3
PTPN4-204ENST00000431283 CLUHP3Q96NS8 147 aa6.9□□□□□ -1.3
PTPN4-204ENST00000431283 ZSWIM4Q9H7M6 989 aa6.9□□□□□ -1.3
PTPN4-204ENST00000431283 RCAN3Q9UKA8 241 aa6.9□□□□□ -1.3
PTPN4-204ENST00000431283 REXO2Q9Y3B8 237 aaKnown RBP6.9□□□□□ -1.3
PTPN4-204ENST00000431283 ADH4P08319 380 aa6.89□□□□□ -1.31
PTPN4-204ENST00000431283 JMJD7P0C870 316 aa6.89□□□□□ -1.31
PTPN4-204ENST00000431283 STAT3P40763 770 aa6.89□□□□□ -1.31
PTPN4-204ENST00000431283 ADCY7P51828 1080 aa6.89□□□□□ -1.31
PTPN4-204ENST00000431283 CNGB1Q14028 1251 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-204ENST00000431283 ZNF460Q14592 562 aa6.89□□□□□ -1.31
PTPN4-204ENST00000431283 CFAP100Q494V2 611 aa6.89□□□□□ -1.31
PTPN4-204ENST00000431283 ZNF662Q6ZS27 426 aa6.89□□□□□ -1.31
PTPN4-204ENST00000431283 BCL6BQ8N143 479 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-204ENST00000431283 C7orf31Q8N865 590 aa6.89□□□□□ -1.31
PTPN4-204ENST00000431283 MENTQ9BUN1 341 aa6.89□□□□□ -1.31
PTPN4-204ENST00000431283 AGO3Q9H9G7 860 aaKnown RBP6.89□□□□□ -1.31
PTPN4-204ENST00000431283 POLR3BQ9NW08 1133 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-204ENST00000431283 ZKSCAN5Q9Y2L8 839 aa6.89□□□□□ -1.31
PTPN4-204ENST00000431283 WDR33Q9C0J8 1336 aaKnown RBP6.88□□□□□ -1.31
PTPN4-204ENST00000431283 PLSCR1O15162 318 aa6.88□□□□□ -1.31
PTPN4-204ENST00000431283 NARSO43776 548 aaKnown RBP6.88□□□□□ -1.31
PTPN4-204ENST00000431283 DNAJC8O75937 253 aaPredicted RBP6.88□□□□□ -1.31
PTPN4-204ENST00000431283 APOL3O95236 402 aa6.88□□□□□ -1.31
PTPN4-204ENST00000431283 EPHA7Q15375 998 aa6.88□□□□□ -1.31
PTPN4-204ENST00000431283 GAREM2Q75VX8 874 aa6.88□□□□□ -1.31
PTPN4-204ENST00000431283 SH3TC2Q8TF17 1288 aa6.88□□□□□ -1.31
PTPN4-204ENST00000431283 CACTINQ8WUQ7 758 aaKnown RBP6.88□□□□□ -1.31
PTPN4-204ENST00000431283 B4GALT6Q9UBX8 382 aa6.88□□□□□ -1.31
PTPN4-204ENST00000431283 SH3BP1Q9Y3L3 701 aa6.88□□□□□ -1.31
PTPN4-204ENST00000431283 TRAF5O00463 557 aa6.87□□□□□ -1.31
PTPN4-204ENST00000431283 DVL2O14641 736 aa6.87□□□□□ -1.31
PTPN4-204ENST00000431283 MAKP20794 623 aa6.87□□□□□ -1.31
PTPN4-204ENST00000431283 SAFB2Q14151 953 aaKnown RBP eCLIP6.87□□□□□ -1.31
PTPN4-204ENST00000431283 GAGE13Q4V321 117 aa6.87□□□□□ -1.31
PTPN4-204ENST00000431283 CDCA2Q69YH5 1023 aaPredicted RBP6.87□□□□□ -1.31
PTPN4-204ENST00000431283 BMP8AQ7Z5Y6 402 aa6.87□□□□□ -1.31
PTPN4-204ENST00000431283 PHYKPLQ8IUZ5 450 aa6.87□□□□□ -1.31
PTPN4-204ENST00000431283 ZNF483Q8TF39 744 aaPredicted RBP6.87□□□□□ -1.31
PTPN4-204ENST00000431283 NEU4Q8WWR8 484 aaPredicted RBP6.87□□□□□ -1.31
PTPN4-204ENST00000431283 ARL8AQ96BM9 186 aa6.87□□□□□ -1.31
PTPN4-204ENST00000431283 MIEF2Q96C03 454 aa6.87□□□□□ -1.31
PTPN4-204ENST00000431283 TCF25Q9BQ70 676 aa6.87□□□□□ -1.31
PTPN4-204ENST00000431283 TRIM8Q9BZR9 551 aa6.87□□□□□ -1.31
PTPN4-204ENST00000431283 TOMM22Q9NS69 142 aa6.87□□□□□ -1.31
PTPN4-204ENST00000431283 MAGEC2Q9UBF1 373 aaPredicted RBP6.87□□□□□ -1.31
PTPN4-204ENST00000431283 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 UBE2QL1A1L167 161 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 CBX4O00257 560 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 GAS7O60861 476 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 ASMTLO95671 621 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 SLC9A1P19634 815 aa6.86□□□□□ -1.31
PTPN4-204ENST00000431283 PTX3P26022 381 aaPredicted RBP6.86□□□□□ -1.31
PTPN4-204ENST00000431283 ANTXR2P58335 489 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms