RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ANO5Q75V66 913 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 MIER3Q7Z3K6 550 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 FAM178BQ8IXR5 827 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 NSUN7Q8NE18 718 aaKnown RBP13.28□□□□□ -0.28
HDAC4-202ENST00000430200 TNPO1Q92973 898 aaKnown RBP13.28□□□□□ -0.28
HDAC4-202ENST00000430200 GTF3C6Q969F1 213 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 CWH43Q9H720 699 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 CLDND1Q9NY35 253 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 TCEAL9Q9UHQ7 104 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 ZNF318Q5VUA4 2279 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 IGKV6-21A0A0C4DH24 114 aa13.27□□□□□ -0.29
HDAC4-202ENST00000430200 DENND3A2RUS2 1198 aa13.27□□□□□ -0.29
HDAC4-202ENST00000430200 FAM86C2PA6NEL3 165 aa13.27□□□□□ -0.29
HDAC4-202ENST00000430200 TBKBP1A7MCY6 615 aa13.27□□□□□ -0.29
HDAC4-202ENST00000430200 DARSP14868 501 aaKnown RBP13.27□□□□□ -0.29
HDAC4-202ENST00000430200 PIK3AP1Q6ZUJ8 805 aa13.27□□□□□ -0.29
HDAC4-202ENST00000430200 SLC24A5Q71RS6 500 aa13.27□□□□□ -0.29
HDAC4-202ENST00000430200 KRT25Q7Z3Z0 450 aa13.27□□□□□ -0.29
HDAC4-202ENST00000430200 KSR1Q8IVT5 923 aa13.27□□□□□ -0.29
HDAC4-202ENST00000430200 VN1R2Q8NFZ6 395 aa13.27□□□□□ -0.29
HDAC4-202ENST00000430200 POF1BQ8WVV4 589 aa13.27□□□□□ -0.29
HDAC4-202ENST00000430200 P2RX5Q93086 422 aa13.27□□□□□ -0.29
HDAC4-202ENST00000430200 LMAN2LQ9H0V9 348 aa13.27□□□□□ -0.29
HDAC4-202ENST00000430200 SLKQ9H2G2 1235 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-202ENST00000430200 BMP2KQ9NSY1 1161 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-202ENST00000430200 CEP131Q9UPN4 1083 aa13.27□□□□□ -0.29
HDAC4-202ENST00000430200 MEIS3P2A8K0S8 358 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 B4GALT3O60512 393 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 TECTAO75443 2155 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 STAG3L1P0CL83 205 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 COL9A1P20849 921 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 EIF4BP23588 611 aaKnown RBP13.26□□□□□ -0.29
HDAC4-202ENST00000430200 NPEPPSP55786 919 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 ANAPC15P60006 121 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 FAM189BP81408 668 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 TBC1D8BQ0IIM8 1120 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 PPP2R5CQ13362 524 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 MUC6Q6W4X9 2439 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 EP400NLQ6ZTU2 488 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 NEK8Q86SG6 692 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 ZNF598Q86UK7 904 aaKnown RBP13.26□□□□□ -0.29
HDAC4-202ENST00000430200 COLGALT1Q8NBJ5 622 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 CASD1Q96PB1 797 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 MAP7D2Q96T17 732 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 PLVAPQ9BX97 442 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 NIFKQ9BYG3 293 aaKnown RBP13.26□□□□□ -0.29
HDAC4-202ENST00000430200 C1orf112Q9NSG2 853 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 TYW1Q9NV66 732 aaKnown RBP13.26□□□□□ -0.29
HDAC4-202ENST00000430200 TMEM161AQ9NX61 479 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 ORC3Q9UBD5 711 aaPredicted RBP13.26□□□□□ -0.29
HDAC4-202ENST00000430200 LRFN2Q9ULH4 789 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 RWDD3Q9Y3V2 267 aa13.26□□□□□ -0.29
HDAC4-202ENST00000430200 A0A087WZ62 844 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 ZBTB39O15060 712 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 GPR182O15218 404 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 MAGEB2O15479 319 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 ERVFC1P60507 584 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 ZP2Q05996 745 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 XKR3Q5GH77 459 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 GALNT17Q6IS24 598 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 ECHDC2Q86YB7 292 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 FAM177A1Q8N128 213 aaPredicted RBP13.25□□□□□ -0.29
HDAC4-202ENST00000430200 RDM1Q8NG50 284 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 MSLNLQ96KJ4 702 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 FDXACB1Q9BRP7 624 aaPredicted RBP13.25□□□□□ -0.29
HDAC4-202ENST00000430200 C22orf23Q9BZE7 217 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 IGFLR1Q9H665 355 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 RGL1Q9NZL6 768 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 CLEC1BQ9P126 229 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 TRIP11Q15643 1979 aa13.25□□□□□ -0.29
HDAC4-202ENST00000430200 CCDC194A0A1B0GVG4 234 aa13.24□□□□□ -0.29
HDAC4-202ENST00000430200 MBTPS2O43462 519 aa13.24□□□□□ -0.29
HDAC4-202ENST00000430200 CCNT1O60563 726 aaKnown RBP13.24□□□□□ -0.29
HDAC4-202ENST00000430200 CDKL5O76039 1030 aa13.24□□□□□ -0.29
HDAC4-202ENST00000430200 FGF18O76093 207 aa13.24□□□□□ -0.29
HDAC4-202ENST00000430200 PPP4R3AQ6IN85 833 aa13.24□□□□□ -0.29
HDAC4-202ENST00000430200 CPLX2Q6PUV4 134 aaKnown RBP13.24□□□□□ -0.29
HDAC4-202ENST00000430200 TMEM173Q86WV6 379 aaPredicted RBP13.24□□□□□ -0.29
HDAC4-202ENST00000430200 NLRP7Q8WX94 980 aa13.24□□□□□ -0.29
HDAC4-202ENST00000430200 LXNQ9BS40 222 aa13.24□□□□□ -0.29
HDAC4-202ENST00000430200 MINDY3Q9H8M7 445 aa13.24□□□□□ -0.29
HDAC4-202ENST00000430200 BARX2Q9UMQ3 279 aaPredicted RBP13.24□□□□□ -0.29
HDAC4-202ENST00000430200 PCDHB7Q9Y5E2 793 aa13.24□□□□□ -0.29
HDAC4-202ENST00000430200 FSCN2O14926 492 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 MAFO75444 373 aaPredicted RBP13.23□□□□□ -0.29
HDAC4-202ENST00000430200 NRIP1P48552 1158 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 CYP4A11Q02928 519 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 ADAM15Q13444 863 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 LONRF3Q496Y0 759 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 RBM23Q86U06 439 aaKnown RBP13.23□□□□□ -0.29
HDAC4-202ENST00000430200 RNF169Q8NCN4 708 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 FEZF2Q8TBJ5 459 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 HELQQ8TDG4 1101 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 BCL7CQ8WUZ0 217 aaPredicted RBP13.23□□□□□ -0.29
HDAC4-202ENST00000430200 LPPQ93052 612 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 KIF2CQ99661 725 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 LRFN3Q9BTN0 628 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 ELAC1Q9H777 363 aaKnown RBP13.23□□□□□ -0.29
HDAC4-202ENST00000430200 ATP6V0A4Q9HBG4 840 aa13.23□□□□□ -0.29
HDAC4-202ENST00000430200 IFT122Q9HBG6 1241 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms