RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 POLR2FP61218 127 aaKnown RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 CUL1Q13616 776 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 LRRC41Q15345 812 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 RPS6KA1Q15418 735 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 PPP2R5EQ16537 467 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 BMT2Q1RMZ1 405 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 Q4G0T1 1027 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 CFAP58Q5T655 872 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 SPRYD7Q5W111 196 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 LRIG3Q6UXM1 1119 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 KCNK18Q7Z418 384 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 SYCE1Q8N0S2 351 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 LRRC47Q8N1G4 583 aaKnown RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 ARFGAP2Q8N6H7 521 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 CD99L2Q8TCZ2 262 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 TBC1D5Q92609 795 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 EEF2KMTQ96G04 330 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 DRC1Q96MC2 740 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 NUDT12Q9BQG2 462 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 SLC4A5Q9BY07 1137 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 GANQ9H2C0 597 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 DHX36Q9H2U1 1008 aaKnown RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 RYDENQ9NUL5 291 aaKnown RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 NYAP2Q9P242 653 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 ARMCX3Q9UH62 379 aaPredicted RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 KIAA1024Q9UPX6 916 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 DNM3Q9UQ16 869 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 DIS3Q9Y2L1 958 aaKnown RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 BAZ2BQ9UIF8 2168 aaKnown RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 HMGB1P1B2RPK0 211 aaPredicted RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 C6orf229H3BNL8 230 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 TLR2O60603 784 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 CPP00450 1065 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 SSBP05455 408 aaKnown RBP eCLIP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 CCDC172P0C7W6 258 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 GAP43P17677 238 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 MUTP22033 750 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 SLC12A3P55017 1021 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 KCNH2Q12809 1159 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 RAPGEF1Q13905 1077 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 NFIL3Q16649 462 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 KNOP1Q1ED39 458 aaKnown RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 KIAA0753Q2KHM9 967 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 MICALCLQ6ZW33 695 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 C10orf67Q8IYJ2 551 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 SYT2Q8N9I0 419 aaPredicted RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 ACTRT1Q8TDG2 376 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 SCFD1Q8WVM8 642 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 VTI1AQ96AJ9 217 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 LRRC45Q96CN5 670 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 SPAG5Q96R06 1193 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 ANO3Q9BYT9 981 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 KANSL2Q9H9L4 492 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 NLRC4Q9NPP4 1024 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 RBM12Q9NTZ6 932 aaKnown RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 USP40Q9NVE5 1235 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 SYNPO2Q9UMS6 1093 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 DNAH12Q6ZR08 3092 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 GOLGA6L10A6NI86 522 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 BUB1O43683 1085 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 PPP1R12BO60237 982 aaPredicted RBP9.49□□□□□ -0.89
GABPB1-205ENST00000429662 HEXIM1O94992 359 aaKnown RBP9.49□□□□□ -0.89
GABPB1-205ENST00000429662 MYBP10242 640 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 XRCC5P13010 732 aaKnown RBP9.49□□□□□ -0.89
GABPB1-205ENST00000429662 FERP16591 822 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 NR2F2P24468 414 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 KLRC1P26715 233 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 RPA1P27694 616 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 CIITAP33076 1130 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 SHMT1P34896 483 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 MATR3P43243 847 aaKnown RBP eCLIP9.49□□□□□ -0.89
GABPB1-205ENST00000429662 MMP14P50281 582 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 FKBP1AP62942 108 aaKnown RBP9.49□□□□□ -0.89
GABPB1-205ENST00000429662 GTF2IP78347 998 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 SREBF2Q12772 1141 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 MTMR3Q13615 1198 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 ECM1Q16610 540 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 UBE2SQ16763 222 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 SPDYCQ5MJ68 293 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 KDM7AQ6ZMT4 941 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 STXBP4Q6ZWJ1 553 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 EPM2AIP1Q7L775 607 aaPredicted RBP9.49□□□□□ -0.89
GABPB1-205ENST00000429662 IQCKQ8N0W5 287 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 USP38Q8NB14 1042 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 C3orf20Q8ND61 904 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 INPP4AQ96PE3 977 aaPredicted RBP9.49□□□□□ -0.89
GABPB1-205ENST00000429662 PTPN18Q99952 460 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 POLR3CQ9BUI4 534 aaPredicted RBP9.49□□□□□ -0.89
GABPB1-205ENST00000429662 TMX4Q9H1E5 349 aaPredicted RBP9.49□□□□□ -0.89
GABPB1-205ENST00000429662 ISCUQ9H1K1 167 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 EPB41L5Q9HCM4 733 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 TYW1Q9NV66 732 aaKnown RBP9.49□□□□□ -0.89
GABPB1-205ENST00000429662 SALL4Q9UJQ4 1053 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 GGA2Q9UJY4 613 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 TMEM59LQ9UK28 342 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 FZD1Q9UP38 647 aa9.49□□□□□ -0.89
GABPB1-205ENST00000429662 UBE4BO95155 1302 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 USP17L10C9JJH3 530 aa9.48□□□□□ -0.89
GABPB1-205ENST00000429662 BHMG1C9JSJ3 638 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms