RNA–Protein interactions for RNA: ENST00000428740.5

IMP4-204, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-204ENST00000428740 AAASQ9NRG9 546 aa16.8■□□□□ 0.28
IMP4-204ENST00000428740 TMEM161AQ9NX61 479 aa16.8■□□□□ 0.28
IMP4-204ENST00000428740 SUCLA2Q9P2R7 463 aaPredicted RBP16.8■□□□□ 0.28
IMP4-204ENST00000428740 MYH9P35579 1960 aaKnown RBP16.79■□□□□ 0.28
IMP4-204ENST00000428740 PTPRSQ13332 1948 aa16.79■□□□□ 0.28
IMP4-204ENST00000428740 FAM205CA6NFA0 338 aa16.79■□□□□ 0.28
IMP4-204ENST00000428740 ASAP2O43150 1006 aa16.79■□□□□ 0.28
IMP4-204ENST00000428740 NCK2O43639 380 aa16.79■□□□□ 0.28
IMP4-204ENST00000428740 TXKP42681 527 aa16.79■□□□□ 0.28
IMP4-204ENST00000428740 MCM2P49736 904 aa16.79■□□□□ 0.28
IMP4-204ENST00000428740 ST3GAL1Q11201 340 aa16.79■□□□□ 0.28
IMP4-204ENST00000428740 GNL2Q13823 731 aaKnown RBP16.79■□□□□ 0.28
IMP4-204ENST00000428740 DSC3Q14574 896 aa16.79■□□□□ 0.28
IMP4-204ENST00000428740 TIGD5Q53EQ6 642 aa16.79■□□□□ 0.28
IMP4-204ENST00000428740 TCP11Q8WWU5 503 aa16.79■□□□□ 0.28
IMP4-204ENST00000428740 PPP1R16BQ96T49 567 aa16.79■□□□□ 0.28
IMP4-204ENST00000428740 DACT1Q9NYF0 836 aa16.79■□□□□ 0.28
IMP4-204ENST00000428740 MYO9BQ13459 2157 aa16.79■□□□□ 0.28
IMP4-204ENST00000428740 MGEA5O60502 916 aa16.78■□□□□ 0.28
IMP4-204ENST00000428740 SLITRK3O94933 977 aa16.78■□□□□ 0.28
IMP4-204ENST00000428740 LYPLA2O95372 231 aa16.78■□□□□ 0.28
IMP4-204ENST00000428740 XRCC6P12956 609 aaKnown RBP eCLIP16.78■□□□□ 0.28
IMP4-204ENST00000428740 YWHABP31946 246 aaKnown RBP16.78■□□□□ 0.28
IMP4-204ENST00000428740 TRAPPC10P48553 1259 aa16.78■□□□□ 0.28
IMP4-204ENST00000428740 FOSBP53539 338 aa16.78■□□□□ 0.28
IMP4-204ENST00000428740 POLGP54098 1239 aaPredicted RBP16.78■□□□□ 0.28
IMP4-204ENST00000428740 SPIRE1Q08AE8 756 aa16.78■□□□□ 0.28
IMP4-204ENST00000428740 TPH2Q8IWU9 490 aa16.78■□□□□ 0.28
IMP4-204ENST00000428740 RSPH1Q8WYR4 309 aa16.78■□□□□ 0.28
IMP4-204ENST00000428740 DYDC2Q96IM9 177 aa16.78■□□□□ 0.28
IMP4-204ENST00000428740 MTMR9Q96QG7 549 aa16.78■□□□□ 0.28
IMP4-204ENST00000428740 HSD17B14Q9BPX1 270 aa16.78■□□□□ 0.28
IMP4-204ENST00000428740 LXNQ9BS40 222 aa16.78■□□□□ 0.28
IMP4-204ENST00000428740 EOMESO95936 686 aa16.77■□□□□ 0.28
IMP4-204ENST00000428740 SKIP12755 728 aa16.77■□□□□ 0.28
IMP4-204ENST00000428740 SFPQP23246 707 aaKnown RBP eCLIP16.77■□□□□ 0.28
IMP4-204ENST00000428740 GUCY1B3Q02153 619 aa16.77■□□□□ 0.28
IMP4-204ENST00000428740 CSPP1Q1MSJ5 1256 aa16.77■□□□□ 0.28
IMP4-204ENST00000428740 XKR9Q5GH70 373 aa16.77■□□□□ 0.28
IMP4-204ENST00000428740 RHPN2Q8IUC4 686 aa16.77■□□□□ 0.28
IMP4-204ENST00000428740 EIF2AK1Q9BQI3 630 aaKnown RBP16.77■□□□□ 0.28
IMP4-204ENST00000428740 DHX33Q9H6R0 707 aaKnown RBP16.77■□□□□ 0.28
IMP4-204ENST00000428740 ANKEF1Q9NU02 776 aa16.77■□□□□ 0.28
IMP4-204ENST00000428740 RGL1Q9NZL6 768 aa16.77■□□□□ 0.28
IMP4-204ENST00000428740 NOL7Q9UMY1 257 aaKnown RBP16.77■□□□□ 0.28
IMP4-204ENST00000428740 PCDHB12Q9Y5F1 795 aa16.77■□□□□ 0.28
IMP4-204ENST00000428740 TTC3P53804 2025 aa16.76■□□□□ 0.27
IMP4-204ENST00000428740 A0A087WZ62 844 aa16.76■□□□□ 0.27
IMP4-204ENST00000428740 A0A0U1RQF3 1178 aa16.76■□□□□ 0.27
IMP4-204ENST00000428740 TMEM150BA6NC51 233 aa16.76■□□□□ 0.27
IMP4-204ENST00000428740 ATP2B1P20020 1258 aa16.76■□□□□ 0.27
IMP4-204ENST00000428740 MCM7P33993 719 aa16.76■□□□□ 0.27
IMP4-204ENST00000428740 NPEPPSP55786 919 aa16.76■□□□□ 0.27
IMP4-204ENST00000428740 CTTNQ14247 550 aaKnown RBP16.76■□□□□ 0.27
IMP4-204ENST00000428740 PLA2G4FQ68DD2 849 aa16.76■□□□□ 0.27
IMP4-204ENST00000428740 NOSTRINQ8IVI9 506 aa16.76■□□□□ 0.27
IMP4-204ENST00000428740 PSPC1Q8WXF1 523 aaKnown RBP16.76■□□□□ 0.27
IMP4-204ENST00000428740 SH2D3AQ9BRG2 576 aa16.76■□□□□ 0.27
IMP4-204ENST00000428740 FDXACB1Q9BRP7 624 aaPredicted RBP16.76■□□□□ 0.27
IMP4-204ENST00000428740 TRAIPQ9BWF2 469 aa16.76■□□□□ 0.27
IMP4-204ENST00000428740 NSUN3Q9H649 340 aaKnown RBP16.76■□□□□ 0.27
IMP4-204ENST00000428740 MRPL42Q9Y6G3 142 aaKnown RBP16.76■□□□□ 0.27
IMP4-204ENST00000428740 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.75■□□□□ 0.27
IMP4-204ENST00000428740 TBKBP1A7MCY6 615 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 RBAK-RBAKDNI3L0D1 243 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 LINC00271P0C7V0 271 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 CYP4A11Q02928 519 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 DRP2Q13474 957 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 MXD4Q14582 209 aaPredicted RBP16.75■□□□□ 0.27
IMP4-204ENST00000428740 PAN2Q504Q3 1202 aaKnown RBP16.75■□□□□ 0.27
IMP4-204ENST00000428740 SPOUT1Q5T280 376 aaKnown RBP16.75■□□□□ 0.27
IMP4-204ENST00000428740 SRGAP1Q7Z6B7 1085 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 ECHDC2Q86YB7 292 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 ABI1Q8IZP0 508 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 ERMNQ8TAM6 284 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 PRPF31Q8WWY3 499 aaKnown RBP16.75■□□□□ 0.27
IMP4-204ENST00000428740 PPP2R3CQ969Q6 453 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 CCDC43Q96MW1 224 aaKnown RBP16.75■□□□□ 0.27
IMP4-204ENST00000428740 TMEM117Q9H0C3 514 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 PLAGL2Q9UPG8 496 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 COL4A3BPQ9Y5P4 624 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 STK24Q9Y6E0 443 aa16.75■□□□□ 0.27
IMP4-204ENST00000428740 CHD7Q9P2D1 2997 aa16.74■□□□□ 0.27
IMP4-204ENST00000428740 CARNS1A5YM72 827 aa16.74■□□□□ 0.27
IMP4-204ENST00000428740 DGAT1O75907 488 aa16.74■□□□□ 0.27
IMP4-204ENST00000428740 BMP1P13497 986 aa16.74■□□□□ 0.27
IMP4-204ENST00000428740 IBSPP21815 317 aaPredicted RBP16.74■□□□□ 0.27
IMP4-204ENST00000428740 U2AF2P26368 475 aaKnown RBP eCLIP16.74■□□□□ 0.271e-7■■■□□ 17.4
IMP4-204ENST00000428740 UBE3AQ05086 875 aa16.74■□□□□ 0.27
IMP4-204ENST00000428740 NCBP1Q09161 790 aaKnown RBP16.74■□□□□ 0.27
IMP4-204ENST00000428740 PCBP1Q15365 356 aaKnown RBP eCLIP16.74■□□□□ 0.27
IMP4-204ENST00000428740 PUS10Q3MIT2 529 aaKnown RBP16.74■□□□□ 0.27
IMP4-204ENST00000428740 FAM102BQ5T8I3 360 aa16.74■□□□□ 0.27
IMP4-204ENST00000428740 ZNF668Q96K58 619 aaPredicted RBP16.74■□□□□ 0.27
IMP4-204ENST00000428740 TUFT1Q9NNX1 390 aa16.74■□□□□ 0.27
IMP4-204ENST00000428740 WRAP73Q9P2S5 460 aaPredicted RBP16.74■□□□□ 0.27
IMP4-204ENST00000428740 SIP14410 1827 aa16.74■□□□□ 0.27
IMP4-204ENST00000428740 GRM6O15303 877 aa16.73■□□□□ 0.27
IMP4-204ENST00000428740 OR52Z1P0C646 297 aa16.73■□□□□ 0.27
IMP4-204ENST00000428740 POU5F1BQ06416 359 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms