RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 PATL1Q86TB9 770 aaKnown RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 SH3TC2Q8TF17 1288 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 MTBPQ96DY7 904 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 LRRIQ1Q96JM4 1722 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 GTPBP10A4D1E9 387 aaKnown RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 CFLARO15519 480 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 GFPT2O94808 682 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 HSPA4LO95757 839 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 ASNSP08243 561 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 DCAF4L1Q3SXM0 396 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 SLC26A7Q8TE54 656 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 PBKQ96KB5 322 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 ZWILCHQ9H900 591 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 MED4Q9NPJ6 270 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 KLHL8Q9P2G9 620 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 FKBP3Q00688 224 aaKnown RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 CENPUQ71F23 418 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 MARCH10Q8NA82 808 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 FAF2Q96CS3 445 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 OTUB1Q96FW1 271 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 DDX50Q9BQ39 737 aaKnown RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 FANCLQ9NW38 375 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 TPX2Q9ULW0 747 aaKnown RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 RPAP1Q9BWH6 1393 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-208ENST00000428599 COBLO75128 1261 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 CHRNA5P30532 468 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 SNAP25P60880 206 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 KCNA1Q09470 495 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 LRRC41Q15345 812 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 KRT39Q6A163 491 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 TOGARAM2Q6ZUX3 1019 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 PDIK1LQ8N165 341 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 FBXO41Q8TF61 875 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 LBHD1Q9BQE6 289 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-208ENST00000428599 ANLNQ9NQW6 1124 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 G3BP2Q9UN86 482 aaKnown RBP9.56□□□□□ -0.88
CTNND1-208ENST00000428599 L3MBTL1Q9Y468 752 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 CEP170BQ9Y4F5 1589 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-208ENST00000428599 SYNDIG1LA6NDD5 238 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 TRPA1O75762 1119 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 PLS3P13797 630 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 IFNAR2P48551 515 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 NDUFA8P51970 172 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 PLTPP55058 493 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 BBS9Q3SYG4 887 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 KHDRBS2Q5VWX1 349 aaKnown RBP9.56□□□□□ -0.88
CTNND1-208ENST00000428599 ANKRD13CQ8N6S4 541 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 TRIM54Q9BYV2 358 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 PRDM5Q9NQX1 630 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-208ENST00000428599 CLCA2Q9UQC9 943 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 SLC4A7Q9Y6M7 1214 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 SNCBQ16143 134 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 UBE2SQ16763 222 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 TRIM62Q9BVG3 475 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 TRIM4Q9C037 500 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 EMILIN3Q9NT22 766 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 MAP3K20Q9NYL2 800 aaKnown RBP9.56□□□□□ -0.88
CTNND1-208ENST00000428599 EXOC1LA0A1B0GW35 172 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 PPP6R2O75170 966 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 E2F6O75461 281 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 KCNJ6P48051 423 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 THNSL1Q8IYQ7 743 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 ASNSD1Q9NWL6 643 aa9.56□□□□□ -0.88
CTNND1-208ENST00000428599 PNMA6FA0A0J9YX94 578 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 RAP1GDS1P52306 607 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 BLVRAP53004 296 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 ADCY1Q08828 1119 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 TTLL4Q14679 1199 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 ZNF658Q5TYW1 1059 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-208ENST00000428599 PYROXD1Q8WU10 500 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 GPBP1L1Q9HC44 474 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-208ENST00000428599 GINM1Q9NU53 330 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 SELENONQ9NZV5 590 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 TMEM63CQ9P1W3 806 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 FAM196BA6NMK8 535 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 PRPF4O43172 522 aaKnown RBP eCLIP9.55□□□□□ -0.884e-8■□□□□ 10.4
CTNND1-208ENST00000428599 PLA2G4BP0C869 781 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 FOXO4P98177 505 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 SP8Q8IXZ3 490 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 FAM133AQ8N9E0 248 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 WRNIP1Q96S55 665 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 TRPV6Q9H1D0 765 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 SP110Q9HB58 689 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 KIAA1586Q9HCI6 787 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 NGRNQ9NPE2 291 aaKnown RBP9.55□□□□□ -0.88
CTNND1-208ENST00000428599 DIP2BQ9P265 1576 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 ZNF197O14709 1029 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 TJP3O95049 919 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 MMP1P03956 469 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 CYBBP04839 570 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 PRKCQQ04759 706 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 MAPK6Q16659 721 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 LINC00116Q8NCU8 138 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 TTC8Q8TAM2 541 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 BCAS4Q8TDM0 211 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 DCAF4Q8WV16 495 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 ABHD8Q96I13 439 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
CTNND1-208ENST00000428599 TXLNGQ9NUQ3 528 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms