RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 EPHA7Q15375 998 aa17.3■□□□□ 0.36
TSPO-204ENST00000428336 PLA2G4FQ68DD2 849 aa17.3■□□□□ 0.36
TSPO-204ENST00000428336 DIS3L2Q8IYB7 885 aaKnown RBP17.3■□□□□ 0.36
TSPO-204ENST00000428336 NSUN3Q9H649 340 aaKnown RBP17.3■□□□□ 0.36
TSPO-204ENST00000428336 ELAC1Q9H777 363 aaKnown RBP17.3■□□□□ 0.36
TSPO-204ENST00000428336 TMEM161AQ9NX61 479 aa17.3■□□□□ 0.36
TSPO-204ENST00000428336 EVPLQ92817 2033 aa17.3■□□□□ 0.36
TSPO-204ENST00000428336 ITGB1P05556 798 aa17.29■□□□□ 0.36
TSPO-204ENST00000428336 FGFR4P22455 802 aa17.29■□□□□ 0.36
TSPO-204ENST00000428336 NPEPPSP55786 919 aa17.29■□□□□ 0.36
TSPO-204ENST00000428336 COL19A1Q14993 1142 aa17.29■□□□□ 0.36
TSPO-204ENST00000428336 NAALADL2Q58DX5 795 aa17.29■□□□□ 0.36
TSPO-204ENST00000428336 SLFN12Q8IYM2 578 aa17.29■□□□□ 0.36
TSPO-204ENST00000428336 ZNF579Q8NAF0 562 aaKnown RBP17.29■□□□□ 0.36
TSPO-204ENST00000428336 NLRP7Q8WX94 980 aa17.29■□□□□ 0.36
TSPO-204ENST00000428336 P2RX5Q93086 422 aa17.29■□□□□ 0.36
TSPO-204ENST00000428336 BACH2Q9BYV9 841 aa17.29■□□□□ 0.36
TSPO-204ENST00000428336 ALG13Q9NP73 1137 aaKnown RBP17.29■□□□□ 0.36
TSPO-204ENST00000428336 CYP26B1Q9NR63 512 aa17.29■□□□□ 0.36
TSPO-204ENST00000428336 RNF216Q9NWF9 866 aaPredicted RBP17.29■□□□□ 0.36
TSPO-204ENST00000428336 RGL1Q9NZL6 768 aa17.29■□□□□ 0.36
TSPO-204ENST00000428336 TBKBP1A7MCY6 615 aa17.28■□□□□ 0.36
TSPO-204ENST00000428336 MARCH6O60337 910 aa17.28■□□□□ 0.36
TSPO-204ENST00000428336 DKC1O60832 514 aaKnown RBP eCLIP17.28■□□□□ 0.36
TSPO-204ENST00000428336 CSDE1O75534 798 aaKnown RBP17.28■□□□□ 0.36
TSPO-204ENST00000428336 BAG4O95429 457 aaKnown RBP17.28■□□□□ 0.36
TSPO-204ENST00000428336 ZSCAN20P17040 1043 aaPredicted RBP17.28■□□□□ 0.36
TSPO-204ENST00000428336 KCNA5P22460 613 aa17.28■□□□□ 0.36
TSPO-204ENST00000428336 DNAJB1P25685 340 aa17.28■□□□□ 0.36
TSPO-204ENST00000428336 CDC42EP1Q00587 391 aa17.28■□□□□ 0.36
TSPO-204ENST00000428336 LEXMQ3ZCV2 418 aa17.28■□□□□ 0.36
TSPO-204ENST00000428336 CCDC83Q8IWF9 413 aa17.28■□□□□ 0.36
TSPO-204ENST00000428336 C4orf19Q8IY42 314 aa17.28■□□□□ 0.36
TSPO-204ENST00000428336 KLHL23Q8NBE8 558 aa17.28■□□□□ 0.36
TSPO-204ENST00000428336 SPPL3Q8TCT6 385 aa17.28■□□□□ 0.36
TSPO-204ENST00000428336 SCLT1Q96NL6 688 aa17.28■□□□□ 0.36
TSPO-204ENST00000428336 GCOM2Q9BZD3 368 aaPredicted RBP17.28■□□□□ 0.36
TSPO-204ENST00000428336 ATP6V0A4Q9HBG4 840 aa17.28■□□□□ 0.36
TSPO-204ENST00000428336 RNF19AQ9NV58 838 aa17.28■□□□□ 0.36
TSPO-204ENST00000428336 SUCLA2Q9P2R7 463 aaPredicted RBP17.28■□□□□ 0.36
TSPO-204ENST00000428336 MUC3AQ02505 3323 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 A0A087WZ62 844 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 FGFR1P11362 822 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 DNM2P50570 870 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 TRIM29Q14134 588 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 NCAPH2Q6IBW4 605 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 ZNF410Q86VK4 478 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 ECHDC2Q86YB7 292 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.27■□□□□ 0.36
TSPO-204ENST00000428336 NEK9Q8TD19 979 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 PABPC5Q96DU9 382 aaKnown RBP17.27■□□□□ 0.36
TSPO-204ENST00000428336 DYDC2Q96IM9 177 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 CEP170P1Q96L14 293 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 FDXACB1Q9BRP7 624 aaPredicted RBP17.27■□□□□ 0.36
TSPO-204ENST00000428336 LLPHQ9BRT6 129 aaKnown RBP17.27■□□□□ 0.36
TSPO-204ENST00000428336 LXNQ9BS40 222 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 DHX33Q9H6R0 707 aaKnown RBP17.27■□□□□ 0.36
TSPO-204ENST00000428336 ZSWIM4Q9H7M6 989 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.36
TSPO-204ENST00000428336 HCSTQ9UBK5 93 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 PPME1Q9Y570 386 aa17.27■□□□□ 0.36
TSPO-204ENST00000428336 LOXHD1Q8IVV2 1947 aa17.27■□□□□ 0.35
TSPO-204ENST00000428336 BRWD1Q9NSI6 2320 aa17.26■□□□□ 0.35
TSPO-204ENST00000428336 ZBTB39O15060 712 aa17.26■□□□□ 0.35
TSPO-204ENST00000428336 SLITRK3O94933 977 aa17.26■□□□□ 0.35
TSPO-204ENST00000428336 YWHABP31946 246 aaKnown RBP17.26■□□□□ 0.35
TSPO-204ENST00000428336 GUCY1B3Q02153 619 aa17.26■□□□□ 0.35
TSPO-204ENST00000428336 HYAL1Q12794 435 aa17.26■□□□□ 0.35
TSPO-204ENST00000428336 CTTNQ14247 550 aaKnown RBP17.26■□□□□ 0.35
TSPO-204ENST00000428336 CALCRLQ16602 461 aa17.26■□□□□ 0.35
TSPO-204ENST00000428336 RHPN2Q8IUC4 686 aa17.26■□□□□ 0.35
TSPO-204ENST00000428336 KSR1Q8IVT5 923 aa17.26■□□□□ 0.35
TSPO-204ENST00000428336 CASD1Q96PB1 797 aa17.26■□□□□ 0.35
TSPO-204ENST00000428336 MTMR9Q96QG7 549 aa17.26■□□□□ 0.35
TSPO-204ENST00000428336 JPH2Q9BR39 696 aaPredicted RBP17.26■□□□□ 0.35
TSPO-204ENST00000428336 CWH43Q9H720 699 aa17.26■□□□□ 0.35
TSPO-204ENST00000428336 TYW1Q9NV66 732 aaKnown RBP17.26■□□□□ 0.35
TSPO-204ENST00000428336 PCDHA12Q9UN75 941 aa17.26■□□□□ 0.35
TSPO-204ENST00000428336 MYO7AQ13402 2215 aa17.25■□□□□ 0.35
TSPO-204ENST00000428336 WDR81Q562E7 1941 aa17.25■□□□□ 0.35
TSPO-204ENST00000428336 RALGAPA2Q2PPJ7 1873 aa17.25■□□□□ 0.35
TSPO-204ENST00000428336 A0A0U1RQF3 1178 aa17.25■□□□□ 0.35
TSPO-204ENST00000428336 CSPG5O95196 566 aa17.25■□□□□ 0.35
TSPO-204ENST00000428336 RBM25P49756 843 aaKnown RBP17.25■□□□□ 0.35
TSPO-204ENST00000428336 CYP4A11Q02928 519 aa17.25■□□□□ 0.35
TSPO-204ENST00000428336 CTC1Q2NKJ3 1217 aa17.25■□□□□ 0.35
TSPO-204ENST00000428336 LRRC55Q6ZSA7 311 aa17.25■□□□□ 0.35
TSPO-204ENST00000428336 ZNF598Q86UK7 904 aaKnown RBP17.25■□□□□ 0.35
TSPO-204ENST00000428336 POF1BQ8WVV4 589 aa17.25■□□□□ 0.35
TSPO-204ENST00000428336 ZSCAN31Q96LW9 406 aaPredicted RBP17.25■□□□□ 0.35
TSPO-204ENST00000428336 HSD17B14Q9BPX1 270 aa17.25■□□□□ 0.35
TSPO-204ENST00000428336 EIF2AK1Q9BQI3 630 aaKnown RBP17.25■□□□□ 0.35
TSPO-204ENST00000428336 TMEM117Q9H0C3 514 aa17.25■□□□□ 0.35
TSPO-204ENST00000428336 TTC12Q9H892 705 aaPredicted RBP17.25■□□□□ 0.35
TSPO-204ENST00000428336 CHST12Q9NRB3 414 aa17.25■□□□□ 0.35
TSPO-204ENST00000428336 H3BQ06 376 aaPredicted RBP17.24■□□□□ 0.35
TSPO-204ENST00000428336 NCK2O43639 380 aa17.24■□□□□ 0.35
TSPO-204ENST00000428336 NEMFO60524 1076 aa17.24■□□□□ 0.35
TSPO-204ENST00000428336 ATF7P17544 494 aaPredicted RBP17.24■□□□□ 0.35
TSPO-204ENST00000428336 GTF2F1P35269 517 aaKnown RBP eCLIP17.24■□□□□ 0.352e-6■■■■□ 26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms