RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TBKBP1A7MCY6 615 aa20.65■□□□□ 0.9
PSPC1-202ENST00000427943 BTBD18B2RXH4 712 aa20.65■□□□□ 0.9
PSPC1-202ENST00000427943 TBX3O15119 743 aa20.65■□□□□ 0.9
PSPC1-202ENST00000427943 FGFR1P11362 822 aa20.65■□□□□ 0.9
PSPC1-202ENST00000427943 DARSP14868 501 aaKnown RBP20.65■□□□□ 0.9
PSPC1-202ENST00000427943 KCNA5P22460 613 aa20.65■□□□□ 0.9
PSPC1-202ENST00000427943 EIF4BP23588 611 aaKnown RBP20.65■□□□□ 0.9
PSPC1-202ENST00000427943 QARSP47897 775 aaKnown RBP20.65■□□□□ 0.9
PSPC1-202ENST00000427943 TRIM29Q14134 588 aa20.65■□□□□ 0.9
PSPC1-202ENST00000427943 C8orf34Q49A92 452 aa20.65■□□□□ 0.9
PSPC1-202ENST00000427943 FAM102BQ5T8I3 360 aa20.65■□□□□ 0.9
PSPC1-202ENST00000427943 CCDC83Q8IWF9 413 aa20.65■□□□□ 0.9
PSPC1-202ENST00000427943 DIS3L2Q8IYB7 885 aaKnown RBP20.65■□□□□ 0.9
PSPC1-202ENST00000427943 WRAP73Q9P2S5 460 aaPredicted RBP20.65■□□□□ 0.9
PSPC1-202ENST00000427943 HCSTQ9UBK5 93 aa20.65■□□□□ 0.9
PSPC1-202ENST00000427943 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.64■□□□□ 0.89
PSPC1-202ENST00000427943 WNT7AO00755 349 aa20.64■□□□□ 0.89
PSPC1-202ENST00000427943 CSDE1O75534 798 aaKnown RBP20.64■□□□□ 0.89
PSPC1-202ENST00000427943 GUCY1B3Q02153 619 aa20.64■□□□□ 0.89
PSPC1-202ENST00000427943 EP400NLQ6ZTU2 488 aa20.64■□□□□ 0.89
PSPC1-202ENST00000427943 PLVAPQ9BX97 442 aa20.64■□□□□ 0.89
PSPC1-202ENST00000427943 LMAN2LQ9H0V9 348 aa20.64■□□□□ 0.89
PSPC1-202ENST00000427943 PLAGL2Q9UPG8 496 aa20.64■□□□□ 0.89
PSPC1-202ENST00000427943 LIMCH1Q9UPQ0 1083 aa20.64■□□□□ 0.89
PSPC1-202ENST00000427943 BDP1A6H8Y1 2624 aa20.64■□□□□ 0.89
PSPC1-202ENST00000427943 IGKV6-21A0A0C4DH24 114 aa20.63■□□□□ 0.89
PSPC1-202ENST00000427943 ITGB1P05556 798 aa20.63■□□□□ 0.89
PSPC1-202ENST00000427943 NPEPPSP55786 919 aa20.63■□□□□ 0.89
PSPC1-202ENST00000427943 SPIRE1Q08AE8 756 aa20.63■□□□□ 0.89
PSPC1-202ENST00000427943 SPOUT1Q5T280 376 aaKnown RBP20.63■□□□□ 0.89
PSPC1-202ENST00000427943 FAM43BQ6ZT52 329 aaPredicted RBP20.63■□□□□ 0.89
PSPC1-202ENST00000427943 ZNF579Q8NAF0 562 aaKnown RBP20.63■□□□□ 0.89
PSPC1-202ENST00000427943 KLHL23Q8NBE8 558 aa20.63■□□□□ 0.89
PSPC1-202ENST00000427943 P2RX5Q93086 422 aa20.63■□□□□ 0.89
PSPC1-202ENST00000427943 DYDC2Q96IM9 177 aa20.63■□□□□ 0.89
PSPC1-202ENST00000427943 LXNQ9BS40 222 aa20.63■□□□□ 0.89
PSPC1-202ENST00000427943 ATP6V0A4Q9HBG4 840 aa20.63■□□□□ 0.89
PSPC1-202ENST00000427943 CYP26B1Q9NR63 512 aa20.63■□□□□ 0.89
PSPC1-202ENST00000427943 BMP2KQ9NSY1 1161 aaPredicted RBP20.63■□□□□ 0.89
PSPC1-202ENST00000427943 TMEM161AQ9NX61 479 aa20.63■□□□□ 0.89
PSPC1-202ENST00000427943 RGL1Q9NZL6 768 aa20.63■□□□□ 0.89
PSPC1-202ENST00000427943 A0A087WZ62 844 aa20.62■□□□□ 0.89
PSPC1-202ENST00000427943 MAFO75444 373 aaPredicted RBP20.62■□□□□ 0.89
PSPC1-202ENST00000427943 BAG4O95429 457 aaKnown RBP20.62■□□□□ 0.89
PSPC1-202ENST00000427943 P4HBP07237 508 aaKnown RBP20.62■□□□□ 0.89
PSPC1-202ENST00000427943 ZSCAN20P17040 1043 aaPredicted RBP20.62■□□□□ 0.89
PSPC1-202ENST00000427943 DNAJB1P25685 340 aa20.62■□□□□ 0.89
PSPC1-202ENST00000427943 DNM2P50570 870 aa20.62■□□□□ 0.89
PSPC1-202ENST00000427943 CYP4A11Q02928 519 aa20.62■□□□□ 0.89
PSPC1-202ENST00000427943 EPHA7Q15375 998 aa20.62■□□□□ 0.89
PSPC1-202ENST00000427943 RHPN2Q8IUC4 686 aa20.62■□□□□ 0.89
PSPC1-202ENST00000427943 SLFN12Q8IYM2 578 aa20.62■□□□□ 0.89
PSPC1-202ENST00000427943 ZNF710Q8N1W2 664 aa20.62■□□□□ 0.89
PSPC1-202ENST00000427943 FDXACB1Q9BRP7 624 aaPredicted RBP20.62■□□□□ 0.89
PSPC1-202ENST00000427943 RNF216Q9NWF9 866 aaPredicted RBP20.62■□□□□ 0.89
PSPC1-202ENST00000427943 SUCLA2Q9P2R7 463 aaPredicted RBP20.62■□□□□ 0.89
PSPC1-202ENST00000427943 H3BQ06 376 aaPredicted RBP20.61■□□□□ 0.89
PSPC1-202ENST00000427943 DKC1O60832 514 aaKnown RBP eCLIP20.61■□□□□ 0.89
PSPC1-202ENST00000427943 FAM189BP81408 668 aa20.61■□□□□ 0.89
PSPC1-202ENST00000427943 CAMK1Q14012 370 aa20.61■□□□□ 0.89
PSPC1-202ENST00000427943 CTTNQ14247 550 aaKnown RBP20.61■□□□□ 0.89
PSPC1-202ENST00000427943 CALCRLQ16602 461 aa20.61■□□□□ 0.89
PSPC1-202ENST00000427943 LEXMQ3ZCV2 418 aa20.61■□□□□ 0.89
PSPC1-202ENST00000427943 ECHDC2Q86YB7 292 aa20.61■□□□□ 0.89
PSPC1-202ENST00000427943 KSR1Q8IVT5 923 aa20.61■□□□□ 0.89
PSPC1-202ENST00000427943 RNF169Q8NCN4 708 aa20.61■□□□□ 0.89
PSPC1-202ENST00000427943 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.61■□□□□ 0.89
PSPC1-202ENST00000427943 CEP170P1Q96L14 293 aa20.61■□□□□ 0.89
PSPC1-202ENST00000427943 NLRP4Q96MN2 994 aa20.61■□□□□ 0.89
PSPC1-202ENST00000427943 KIF2CQ99661 725 aa20.61■□□□□ 0.89
PSPC1-202ENST00000427943 GCOM2Q9BZD3 368 aaPredicted RBP20.61■□□□□ 0.89
PSPC1-202ENST00000427943 ELAC1Q9H777 363 aaKnown RBP20.61■□□□□ 0.89
PSPC1-202ENST00000427943 RNF19AQ9NV58 838 aa20.61■□□□□ 0.89
PSPC1-202ENST00000427943 CLDND1Q9NY35 253 aa20.61■□□□□ 0.89
PSPC1-202ENST00000427943 NEMFO60524 1076 aa20.6■□□□□ 0.89
PSPC1-202ENST00000427943 IRS1P35568 1242 aa20.6■□□□□ 0.89
PSPC1-202ENST00000427943 POLGP54098 1239 aaPredicted RBP20.6■□□□□ 0.89
PSPC1-202ENST00000427943 HYAL1Q12794 435 aa20.6■□□□□ 0.89
PSPC1-202ENST00000427943 NAALADL2Q58DX5 795 aa20.6■□□□□ 0.89
PSPC1-202ENST00000427943 SPPL3Q8TCT6 385 aa20.6■□□□□ 0.89
PSPC1-202ENST00000427943 POF1BQ8WVV4 589 aa20.6■□□□□ 0.89
PSPC1-202ENST00000427943 PABPC5Q96DU9 382 aaKnown RBP20.6■□□□□ 0.89
PSPC1-202ENST00000427943 TYW1Q9NV66 732 aaKnown RBP20.6■□□□□ 0.89
PSPC1-202ENST00000427943 YWHABP31946 246 aaKnown RBP20.59■□□□□ 0.89
PSPC1-202ENST00000427943 GTF2F1P35269 517 aaKnown RBP eCLIP20.59■□□□□ 0.89
PSPC1-202ENST00000427943 ADGRD2Q7Z7M1 963 aa20.59■□□□□ 0.89
PSPC1-202ENST00000427943 ZNF410Q86VK4 478 aa20.59■□□□□ 0.89
PSPC1-202ENST00000427943 C4orf19Q8IY42 314 aa20.59■□□□□ 0.89
PSPC1-202ENST00000427943 COLGALT1Q8NBJ5 622 aa20.59■□□□□ 0.89
PSPC1-202ENST00000427943 SLC7A3Q8WY07 619 aa20.59■□□□□ 0.89
PSPC1-202ENST00000427943 JPH2Q9BR39 696 aaPredicted RBP20.59■□□□□ 0.89
PSPC1-202ENST00000427943 PCDHGC5Q9Y5F6 944 aa20.59■□□□□ 0.89
PSPC1-202ENST00000427943 ZBTB39O15060 712 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 IL9P15248 144 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 ATP2B1P20020 1258 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 SFPQP23246 707 aaKnown RBP eCLIP20.58■□□□□ 0.89
PSPC1-202ENST00000427943 COL19A1Q14993 1142 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 PTCRAQ6ISU1 281 aaPredicted RBP20.58■□□□□ 0.89
PSPC1-202ENST00000427943 TPH2Q8IWU9 490 aa20.58■□□□□ 0.89
PSPC1-202ENST00000427943 NEK9Q8TD19 979 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms