RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 MRPL38Q96DV4 380 aaKnown RBP12.06□□□□□ -0.48
LINC01238-202ENST00000426962 DYDC2Q96IM9 177 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 ZNF668Q96K58 619 aaPredicted RBP12.06□□□□□ -0.48
LINC01238-202ENST00000426962 CEP170P1Q96L14 293 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 SCLT1Q96NL6 688 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 MTMR9Q96QG7 549 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 GCOM2Q9BZD3 368 aaPredicted RBP12.06□□□□□ -0.48
LINC01238-202ENST00000426962 ELAC1Q9H777 363 aaKnown RBP12.06□□□□□ -0.48
LINC01238-202ENST00000426962 TTC12Q9H892 705 aaPredicted RBP12.06□□□□□ -0.48
LINC01238-202ENST00000426962 RGL1Q9NZL6 768 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 SUCLA2Q9P2R7 463 aaPredicted RBP12.06□□□□□ -0.48
LINC01238-202ENST00000426962 WRAP73Q9P2S5 460 aaPredicted RBP12.06□□□□□ -0.48
LINC01238-202ENST00000426962 COG5Q9UP83 839 aa12.06□□□□□ -0.48
LINC01238-202ENST00000426962 WNT7AO00755 349 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 ATP2B1P20020 1258 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 YWHABP31946 246 aaKnown RBP12.05□□□□□ -0.48
LINC01238-202ENST00000426962 CTNNB1P35222 781 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 TXKP42681 527 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 NPEPPSP55786 919 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 CTTNQ14247 550 aaKnown RBP12.05□□□□□ -0.48
LINC01238-202ENST00000426962 AAK1Q2M2I8 961 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 PLA2G4FQ68DD2 849 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 ZNF410Q86VK4 478 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 SLC7A3Q8WY07 619 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 HLA-CQ95604 372 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 HSD17B14Q9BPX1 270 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 EIF2AK1Q9BQI3 630 aaKnown RBP12.05□□□□□ -0.48
LINC01238-202ENST00000426962 LXNQ9BS40 222 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 PLVAPQ9BX97 442 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 INO80BQ9C086 356 aaPredicted RBP12.05□□□□□ -0.48
LINC01238-202ENST00000426962 COL4A6Q14031 1691 aa12.05□□□□□ -0.48
LINC01238-202ENST00000426962 A0A087WZ62 844 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 LYPLA2O95372 231 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 IBSPP21815 317 aaPredicted RBP12.04□□□□□ -0.48
LINC01238-202ENST00000426962 MCM7P33993 719 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 RFC5P40937 340 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 POLGP54098 1239 aaPredicted RBP12.04□□□□□ -0.48
LINC01238-202ENST00000426962 CYP4A11Q02928 519 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 ORC2Q13416 577 aaPredicted RBP12.04□□□□□ -0.48
LINC01238-202ENST00000426962 GNL2Q13823 731 aaKnown RBP12.04□□□□□ -0.48
LINC01238-202ENST00000426962 PAN2Q504Q3 1202 aaKnown RBP12.04□□□□□ -0.48
LINC01238-202ENST00000426962 NAALADL2Q58DX5 795 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 XKR9Q5GH70 373 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 FAM102BQ5T8I3 360 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 RHPN2Q8IUC4 686 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 ZNF579Q8NAF0 562 aaKnown RBP12.04□□□□□ -0.48
LINC01238-202ENST00000426962 NEK9Q8TD19 979 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 P2RX5Q93086 422 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 FDXACB1Q9BRP7 624 aaPredicted RBP12.04□□□□□ -0.48
LINC01238-202ENST00000426962 C11orf84Q9BUA3 381 aaPredicted RBP12.04□□□□□ -0.48
LINC01238-202ENST00000426962 TMEM60Q9H2L4 133 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 DHX33Q9H6R0 707 aaKnown RBP12.04□□□□□ -0.48
LINC01238-202ENST00000426962 ATP6V0A4Q9HBG4 840 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 CHST12Q9NRB3 414 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 TMEM161AQ9NX61 479 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 MRPL42Q9Y6G3 142 aaKnown RBP12.04□□□□□ -0.48
LINC01238-202ENST00000426962 TRANK1O15050 2925 aa12.04□□□□□ -0.48
LINC01238-202ENST00000426962 PRRC2BQ5JSZ5 2229 aaKnown RBP12.04□□□□□ -0.48
LINC01238-202ENST00000426962 WDR81Q562E7 1941 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 LOXHD1Q8IVV2 1947 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 ZBTB39O15060 712 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 ASAP2O43150 1006 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 GAS2O43903 313 aaKnown RBP12.03□□□□□ -0.48
LINC01238-202ENST00000426962 CSDE1O75534 798 aaKnown RBP12.03□□□□□ -0.48
LINC01238-202ENST00000426962 FGFR4P22455 802 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 MCM2P49736 904 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 GATMP50440 423 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 TFF2Q03403 129 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 ZNF174Q15697 407 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 NOSTRINQ8IVI9 506 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 TCP11Q8WWU5 503 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 PRPF31Q8WWY3 499 aaKnown RBP12.03□□□□□ -0.48
LINC01238-202ENST00000426962 LMAN2LQ9H0V9 348 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 ANKEF1Q9NU02 776 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 DACT1Q9NYF0 836 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 PLAGL2Q9UPG8 496 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 KIF3AQ9Y496 699 aa12.03□□□□□ -0.48
LINC01238-202ENST00000426962 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.02□□□□□ -0.49
LINC01238-202ENST00000426962 A0A0U1RQF3 1178 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 TBKBP1A7MCY6 615 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 GRM6O15303 877 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 HOXA2O43364 376 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 EOMESO95936 686 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 XRCC6P12956 609 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC01238-202ENST00000426962 BMP1P13497 986 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 SFPQP23246 707 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC01238-202ENST00000426962 U2AF2P26368 475 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC01238-202ENST00000426962 TRAPPC10P48553 1259 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 TIGD5Q53EQ6 642 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 ECHDC2Q86YB7 292 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 KSR1Q8IVT5 923 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 PSPC1Q8WXF1 523 aaKnown RBP12.02□□□□□ -0.49
LINC01238-202ENST00000426962 TMEM143Q96AN5 459 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 TMX3Q96JJ7 454 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 NLRP4Q96MN2 994 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 TBC1D32Q96NH3 1257 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 IFT122Q9HBG6 1241 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 AAASQ9NRG9 546 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 NOL7Q9UMY1 257 aaKnown RBP12.02□□□□□ -0.49
LINC01238-202ENST00000426962 COL4A3BPQ9Y5P4 624 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms