RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 GDPD5Q8WTR4 605 aa16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 ADAM2Q99965 735 aa16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 C17orf80Q9BSJ5 609 aa16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 C1orf112Q9NSG2 853 aa16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 SUCLA2Q9P2R7 463 aaPredicted RBP16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 NLRC5Q86WI3 1866 aa16.26■□□□□ 0.19
NCKIPSD-205ENST00000426678 RALGAPA2Q2PPJ7 1873 aa16.25■□□□□ 0.19
NCKIPSD-205ENST00000426678 H3BQV1 296 aa16.25■□□□□ 0.19
NCKIPSD-205ENST00000426678 SLITRK3O94933 977 aa16.25■□□□□ 0.19
NCKIPSD-205ENST00000426678 DARSP14868 501 aaKnown RBP16.25■□□□□ 0.19
NCKIPSD-205ENST00000426678 SARSP49591 514 aaKnown RBP16.25■□□□□ 0.19
NCKIPSD-205ENST00000426678 GRB10Q13322 594 aa16.25■□□□□ 0.19
NCKIPSD-205ENST00000426678 BTG3Q14201 252 aaPredicted RBP16.25■□□□□ 0.19
NCKIPSD-205ENST00000426678 CCDC85BQ15834 202 aaPredicted RBP16.25■□□□□ 0.19
NCKIPSD-205ENST00000426678 RHPN2Q8IUC4 686 aa16.25■□□□□ 0.19
NCKIPSD-205ENST00000426678 HSD17B14Q9BPX1 270 aa16.25■□□□□ 0.19
NCKIPSD-205ENST00000426678 GCOM2Q9BZD3 368 aaPredicted RBP16.25■□□□□ 0.19
NCKIPSD-205ENST00000426678 GAS2O43903 313 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 MGEA5O60502 916 aa16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 DGKIO75912 1065 aa16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 LYPLA2O95372 231 aa16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 ZSCAN20P17040 1043 aaPredicted RBP16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 EMC2Q15006 297 aa16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 SLC24A5Q71RS6 500 aa16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 ZNF410Q86VK4 478 aa16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 ZNF579Q8NAF0 562 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 ERMNQ8TAM6 284 aa16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 TCP11Q8WWU5 503 aa16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 NLRP4Q96MN2 994 aa16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 DHX33Q9H6R0 707 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 RC3H2Q9HBD1 1191 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 RGS18Q9NS28 235 aa16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 BMP2KQ9NSY1 1161 aaPredicted RBP16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 RWDD3Q9Y3V2 267 aa16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 PCDHB7Q9Y5E2 793 aa16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 MTCH2Q9Y6C9 303 aa16.24■□□□□ 0.19
NCKIPSD-205ENST00000426678 A0A087WZ62 844 aa16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 POU3F3P20264 500 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 SFPQP23246 707 aaKnown RBP eCLIP16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 CTNNB1P35222 781 aa16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 TECP42680 631 aa16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 NBR1Q14596 966 aa16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 EPC2Q52LR7 807 aa16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 TMEM192Q8IY95 271 aa16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 CMTR2Q8IYT2 770 aaKnown RBP16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 PSPC1Q8WXF1 523 aaKnown RBP16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 ZNF689Q96CS4 500 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 FDXACB1Q9BRP7 624 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 INO80BQ9C086 356 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 ANKEF1Q9NU02 776 aa16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 COL4A3BPQ9Y5P4 624 aa16.23■□□□□ 0.19
NCKIPSD-205ENST00000426678 C9IYK1 514 aa16.22■□□□□ 0.19
NCKIPSD-205ENST00000426678 ZBTB39O15060 712 aa16.22■□□□□ 0.19
NCKIPSD-205ENST00000426678 LPXNO60711 386 aa16.22■□□□□ 0.19
NCKIPSD-205ENST00000426678 PAN2Q504Q3 1202 aaKnown RBP16.22■□□□□ 0.19
NCKIPSD-205ENST00000426678 HAUS3Q68CZ6 603 aa16.22■□□□□ 0.19
NCKIPSD-205ENST00000426678 CRIPAKQ8N1N5 446 aa16.22■□□□□ 0.19
NCKIPSD-205ENST00000426678 TMEM143Q96AN5 459 aa16.22■□□□□ 0.19
NCKIPSD-205ENST00000426678 MTRQ99707 1265 aa16.22■□□□□ 0.19
NCKIPSD-205ENST00000426678 ATP6V0A4Q9HBG4 840 aa16.22■□□□□ 0.19
NCKIPSD-205ENST00000426678 TUFT1Q9NNX1 390 aa16.22■□□□□ 0.19
NCKIPSD-205ENST00000426678 LMCD1Q9NZU5 365 aa16.22■□□□□ 0.19
NCKIPSD-205ENST00000426678 PRRC2BQ5JSZ5 2229 aaKnown RBP16.22■□□□□ 0.19
NCKIPSD-205ENST00000426678 TRANK1O15050 2925 aa16.22■□□□□ 0.19
NCKIPSD-205ENST00000426678 CSDE1O75534 798 aaKnown RBP16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 DGAT1O75907 488 aa16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 FGFR4P22455 802 aa16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 TOB1P50616 345 aaPredicted RBP16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 GPM6BQ13491 265 aa16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 DSC3Q14574 896 aa16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 SKIV2LQ15477 1246 aaKnown RBP16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 RILPL1Q5EBL4 403 aa16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 LARP1BQ659C4 914 aaKnown RBP16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 KSR1Q8IVT5 923 aa16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 PIGOQ8TEQ8 1089 aa16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 PRPF31Q8WWY3 499 aaKnown RBP16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 POLR3CQ9BUI4 534 aaPredicted RBP16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 RAB34Q9BZG1 259 aa16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 TMEM161AQ9NX61 479 aa16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 PCDHB6Q9Y5E3 794 aa16.21■□□□□ 0.19
NCKIPSD-205ENST00000426678 H3BNC9 293 aa16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 LAD1O00515 517 aa16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 MED24O75448 989 aa16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 RARRES1P49788 294 aa16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 GATMP50440 423 aa16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 FXR2P51116 673 aaKnown RBP eCLIP16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 PTGDRQ13258 359 aa16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 CUL4AQ13619 759 aa16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 PTPROQ16827 1216 aa16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 CATSPER4Q7RTX7 472 aa16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 CATSPER3Q86XQ3 398 aa16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 CLP1Q92989 425 aaKnown RBP16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 C11orf84Q9BUA3 381 aaPredicted RBP16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 ELAC1Q9H777 363 aaKnown RBP16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 DACT1Q9NYF0 836 aa16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 THEGQ9P2T0 379 aa16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 MRPL42Q9Y6G3 142 aaKnown RBP16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 EYSQ5T1H1 3165 aa16.2■□□□□ 0.18
NCKIPSD-205ENST00000426678 KIAA1671Q9BY89 1806 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms