RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 TPH2Q8IWU9 490 aa19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 MTMR9Q96QG7 549 aa19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 CEP89Q96ST8 783 aa19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 ADAM2Q99965 735 aa19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 C17orf80Q9BSJ5 609 aa19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 ADAMTS10Q9H324 1103 aa19.57■□□□□ 0.72
SLC6A1-202ENST00000425938 ARID2Q68CP9 1835 aa19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 IGKV6-21A0A0C4DH24 114 aa19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 DGKIO75912 1065 aa19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 IBSPP21815 317 aaPredicted RBP19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 YWHABP31946 246 aaKnown RBP19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 RFC5P40937 340 aa19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 TRAPPC10P48553 1259 aa19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 SARSP49591 514 aaKnown RBP19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 POLGP54098 1239 aaPredicted RBP19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 NPEPPSP55786 919 aa19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 BTG3Q14201 252 aaPredicted RBP19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 TTC38Q5R3I4 469 aa19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 EIF2AK1Q9BQI3 630 aaKnown RBP19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 SUCLA2Q9P2R7 463 aaPredicted RBP19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 WRAP73Q9P2S5 460 aaPredicted RBP19.56■□□□□ 0.72
SLC6A1-202ENST00000425938 MGEA5O60502 916 aa19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 CD2BP2O95400 341 aaKnown RBP19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 DARSP14868 501 aaKnown RBP19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 DRP2Q13474 957 aa19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 ZNF174Q15697 407 aa19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 AAK1Q2M2I8 961 aa19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 EPC2Q52LR7 807 aa19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 SLC24A5Q71RS6 500 aa19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 TMEM192Q8IY95 271 aa19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 ZNF668Q96K58 619 aaPredicted RBP19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 GCOM2Q9BZD3 368 aaPredicted RBP19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 TMEM60Q9H2L4 133 aa19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 RC3H2Q9HBD1 1191 aaKnown RBP19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 RGS18Q9NS28 235 aa19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 RWDD3Q9Y3V2 267 aa19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 PCDHB7Q9Y5E2 793 aa19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 XIRP2A4UGR9 3374 aa19.55■□□□□ 0.72
SLC6A1-202ENST00000425938 SLITRK3O94933 977 aa19.54■□□□□ 0.72
SLC6A1-202ENST00000425938 OR52Z1P0C646 297 aa19.54■□□□□ 0.72
SLC6A1-202ENST00000425938 ZSCAN20P17040 1043 aaPredicted RBP19.54■□□□□ 0.72
SLC6A1-202ENST00000425938 XKR9Q5GH70 373 aa19.54■□□□□ 0.72
SLC6A1-202ENST00000425938 ZNF410Q86VK4 478 aa19.54■□□□□ 0.72
SLC6A1-202ENST00000425938 RHPN2Q8IUC4 686 aa19.54■□□□□ 0.72
SLC6A1-202ENST00000425938 CMTR2Q8IYT2 770 aaKnown RBP19.54■□□□□ 0.72
SLC6A1-202ENST00000425938 ZNF689Q96CS4 500 aaPredicted RBP19.54■□□□□ 0.72
SLC6A1-202ENST00000425938 CCDC43Q96MW1 224 aaKnown RBP19.54■□□□□ 0.72
SLC6A1-202ENST00000425938 HSD17B14Q9BPX1 270 aa19.54■□□□□ 0.72
SLC6A1-202ENST00000425938 COG5Q9UP83 839 aa19.54■□□□□ 0.72
SLC6A1-202ENST00000425938 MYO7AQ13402 2215 aa19.53■□□□□ 0.72
SLC6A1-202ENST00000425938 BRWD1Q9NSI6 2320 aa19.53■□□□□ 0.72
SLC6A1-202ENST00000425938 GAS2O43903 313 aaKnown RBP19.53■□□□□ 0.72
SLC6A1-202ENST00000425938 U2AF2P26368 475 aaKnown RBP eCLIP19.53■□□□□ 0.72
SLC6A1-202ENST00000425938 CTNNB1P35222 781 aa19.53■□□□□ 0.72
SLC6A1-202ENST00000425938 CRIPAKQ8N1N5 446 aa19.53■□□□□ 0.72
SLC6A1-202ENST00000425938 PSPC1Q8WXF1 523 aaKnown RBP19.53■□□□□ 0.72
SLC6A1-202ENST00000425938 INO80BQ9C086 356 aaPredicted RBP19.53■□□□□ 0.72
SLC6A1-202ENST00000425938 DHX33Q9H6R0 707 aaKnown RBP19.53■□□□□ 0.72
SLC6A1-202ENST00000425938 SMC3Q9UQE7 1217 aa19.53■□□□□ 0.72
SLC6A1-202ENST00000425938 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.53■□□□□ 0.72
SLC6A1-202ENST00000425938 FNDC1Q4ZHG4 1894 aaPredicted RBP19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 A0A087WZ62 844 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 POTEMA6NI47 508 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 C9IYK1 514 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 H3BQV1 296 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 LYPLA2O95372 231 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 SFPQP23246 707 aaKnown RBP eCLIP19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 GJB2P29033 226 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 DSC3Q14574 896 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 EMC2Q15006 297 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 PTPROQ16827 1216 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 MCTP1Q6DN14 999 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 ZNF579Q8NAF0 562 aaKnown RBP19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 ERMNQ8TAM6 284 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 TCP11Q8WWU5 503 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 NLRP4Q96MN2 994 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 FDXACB1Q9BRP7 624 aaPredicted RBP19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 BACH2Q9BYV9 841 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 ANKEF1Q9NU02 776 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 COL4A3BPQ9Y5P4 624 aa19.52■□□□□ 0.72
SLC6A1-202ENST00000425938 H3BNC9 293 aa19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 RB1P06400 928 aa19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 TECP42680 631 aa19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 TFF2Q03403 129 aa19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 GPM6BQ13491 265 aa19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 PAN2Q504Q3 1202 aaKnown RBP19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 CLP1Q92989 425 aaKnown RBP19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 HLA-CQ95604 372 aa19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 TMEM143Q96AN5 459 aa19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 MTRQ99707 1265 aa19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 C11orf84Q9BUA3 381 aaPredicted RBP19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 ATP6V0A4Q9HBG4 840 aa19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 BMP2KQ9NSY1 1161 aaPredicted RBP19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 TMEM161AQ9NX61 479 aa19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 DACT1Q9NYF0 836 aa19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 TTC28Q96AY4 2481 aa19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 KIAA1671Q9BY89 1806 aa19.51■□□□□ 0.71
SLC6A1-202ENST00000425938 ZBTB39O15060 712 aa19.5■□□□□ 0.71
SLC6A1-202ENST00000425938 FGFR4P22455 802 aa19.5■□□□□ 0.71
SLC6A1-202ENST00000425938 BMPR1AP36894 532 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms