RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 LARGE1O95461 756 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 TDP2O95551 362 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 ITGB1P05556 798 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 GHRP10912 638 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 SP100P23497 879 aaPredicted RBP14.35□□□□□ -0.11
SGCE-203ENST00000425444 MRPS6P82932 125 aaKnown RBP14.35□□□□□ -0.11
SGCE-203ENST00000425444 ME3Q16798 604 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 FAM26DQ5JW98 314 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 TRMT1LQ7Z2T5 733 aaKnown RBP14.35□□□□□ -0.11
SGCE-203ENST00000425444 KRT25Q7Z3Z0 450 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 KREMEN2Q8NCW0 462 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 SPPL3Q8TCT6 385 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 SUSD6Q92537 303 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 P2RX5Q93086 422 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 GTF3C6Q969F1 213 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 LENG9Q96B70 501 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 CNTNAP3BQ96NU0 1288 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 PHF20Q9BVI0 1012 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 TEKT3Q9BXF9 490 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 CNTNAP3Q9BZ76 1288 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 TLE6Q9H808 572 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 RC3H2Q9HBD1 1191 aaKnown RBP14.35□□□□□ -0.11
SGCE-203ENST00000425444 GABBR1Q9UBS5 961 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 CDY2AQ9Y6F7 541 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 KAT6AQ92794 2004 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 USP24Q9UPU5 2620 aa14.35□□□□□ -0.11
SGCE-203ENST00000425444 M0R2N6 131 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 MSH4O15457 936 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 CHRNA1P02708 482 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 MGAT3Q09327 533 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 NPY5RQ15761 445 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 INF2Q27J81 1249 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 LETM2Q2VYF4 491 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 LRCH2Q5VUJ6 765 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 IER5Q5VY09 327 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 ASTLQ6HA08 431 aaPredicted RBP14.34□□□□□ -0.11
SGCE-203ENST00000425444 BRMS1Q9HCU9 246 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 PCDHGC5Q9Y5F6 944 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 PCDHA2Q9Y5H9 948 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 PCDHA10Q9Y5I2 948 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 TTC3P53804 2025 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 COL1A2P08123 1366 aa14.34□□□□□ -0.11
SGCE-203ENST00000425444 PER2O15055 1255 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 CTDNEP1O95476 244 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 RBM10P98175 930 aaKnown RBP14.33□□□□□ -0.12
SGCE-203ENST00000425444 TMEM62Q0P6H9 643 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 MTMR3Q13615 1198 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 Q4G0T1 1027 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 NAALADL2Q58DX5 795 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 ZNF484Q5JVG2 852 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 MTHFD1LQ6UB35 978 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 UBALD2Q8IYN6 164 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 KLHL23Q8NBE8 558 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 KCNG4Q8TDN1 519 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 MICAL1Q8TDZ2 1067 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 POF1BQ8WVV4 589 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 GJA10Q969M2 543 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 RIT2Q99578 217 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 MFSD1Q9H3U5 465 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 DISC1Q9NRI5 854 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 GJB4Q9NTQ9 266 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 DDX25Q9UHL0 483 aaKnown RBP14.33□□□□□ -0.12
SGCE-203ENST00000425444 TRPV2Q9Y5S1 764 aa14.33□□□□□ -0.12
SGCE-203ENST00000425444 MRPL42Q9Y6G3 142 aaKnown RBP14.33□□□□□ -0.12
SGCE-203ENST00000425444 PKD1L2Q7Z442 2459 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 SMIM35A0A1B0GVV1 85 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 EDIL3O43854 480 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 BRD1O95696 1058 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 KLRC1P26715 233 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 KRT2P35908 639 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 JAK3P52333 1124 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 TRIM29Q14134 588 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 LPIN1Q14693 890 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 FBXO47Q5MNV8 452 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 MOXD1Q6UVY6 613 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 TSHZ1Q6ZSZ6 1077 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 PIK3AP1Q6ZUJ8 805 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 NSUN7Q8NE18 718 aaKnown RBP14.32□□□□□ -0.12
SGCE-203ENST00000425444 BBXQ8WY36 941 aaPredicted RBP14.32□□□□□ -0.12
SGCE-203ENST00000425444 SLC5A5Q92911 643 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 ZNF689Q96CS4 500 aaPredicted RBP14.32□□□□□ -0.12
SGCE-203ENST00000425444 FAM167AQ96KS9 214 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 UNC45AQ9H3U1 944 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 CEP131Q9UPN4 1083 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 SORCS3Q9UPU3 1222 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 GINS2Q9Y248 185 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 MAFBQ9Y5Q3 323 aaPredicted RBP14.32□□□□□ -0.12
SGCE-203ENST00000425444 IGSF9BQ9UPX0 1349 aa14.32□□□□□ -0.12
SGCE-203ENST00000425444 GPR179Q6PRD1 2367 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 CYP3A7-CYP3A51PA0A087WV96 503 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 ENPP3O14638 875 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 MARCH6O60337 910 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 DGKIO75912 1065 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 ATP4AP20648 1035 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 CYP3A7P24462 503 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 SFNP31947 248 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 FOSBP53539 338 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 PRKCEQ02156 737 aa14.31□□□□□ -0.12
SGCE-203ENST00000425444 PAK2Q13177 524 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms