RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 NLRP11P59045 1033 aaKnown RBP14.64□□□□□ -0.07
VRK3-203ENST00000424804 DRP2Q13474 957 aa14.64□□□□□ -0.07
VRK3-203ENST00000424804 Q4G0T1 1027 aa14.64□□□□□ -0.07
VRK3-203ENST00000424804 HERC4Q5GLZ8 1057 aaPredicted RBP14.64□□□□□ -0.07
VRK3-203ENST00000424804 RBM23Q86U06 439 aaKnown RBP14.64□□□□□ -0.07
VRK3-203ENST00000424804 ZNF598Q86UK7 904 aaKnown RBP14.64□□□□□ -0.07
VRK3-203ENST00000424804 CKAP2LQ8IYA6 745 aa14.64□□□□□ -0.07
VRK3-203ENST00000424804 METTL13Q8N6R0 699 aa14.64□□□□□ -0.07
VRK3-203ENST00000424804 ZNF668Q96K58 619 aaPredicted RBP14.64□□□□□ -0.07
VRK3-203ENST00000424804 RIT2Q99578 217 aa14.64□□□□□ -0.07
VRK3-203ENST00000424804 SH3GLB2Q9NR46 395 aa14.64□□□□□ -0.07
VRK3-203ENST00000424804 DISC1Q9NRI5 854 aa14.64□□□□□ -0.07
VRK3-203ENST00000424804 FAM50BQ9Y247 325 aa14.64□□□□□ -0.07
VRK3-203ENST00000424804 IGKV6-21A0A0C4DH24 114 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 DENND3A2RUS2 1198 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 WDR64B1ANS9 1081 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 LOC730098B7Z3J9 87 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 PER2O15055 1255 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 CDKL5O76039 1030 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 DEXIO95424 95 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 LARGE1O95461 756 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 ATF7P17544 494 aaPredicted RBP14.63□□□□□ -0.07
VRK3-203ENST00000424804 IBSPP21815 317 aaPredicted RBP14.63□□□□□ -0.07
VRK3-203ENST00000424804 EIF4BP23588 611 aaKnown RBP14.63□□□□□ -0.07
VRK3-203ENST00000424804 GPC3P51654 580 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 PRKCEQ02156 737 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 UBE3AQ05086 875 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 CBX2Q14781 532 aaPredicted RBP14.63□□□□□ -0.07
VRK3-203ENST00000424804 RNF135Q8IUD6 432 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 BICD2Q8TD16 824 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 TBCKQ8TEA7 893 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 AIFM3Q96NN9 605 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 C22orf23Q9BZE7 217 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 UPF2Q9HAU5 1272 aaKnown RBP14.63□□□□□ -0.07
VRK3-203ENST00000424804 BARX2Q9UMQ3 279 aaPredicted RBP14.63□□□□□ -0.07
VRK3-203ENST00000424804 HCN4Q9Y3Q4 1203 aa14.63□□□□□ -0.07
VRK3-203ENST00000424804 TMEM150BA6NC51 233 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 PFKFB2O60825 505 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 TDP2O95551 362 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 DARSP14868 501 aaKnown RBP14.62□□□□□ -0.07
VRK3-203ENST00000424804 FGFR4P22455 802 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 NDUFV1P49821 464 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 FOSBP53539 338 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 PLCB3Q01970 1234 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 DUSP6Q16828 381 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 CLLU1OSQ5K130 101 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 ODR4Q5SWX8 454 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 ECHDC2Q86YB7 292 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 ETNPPLQ8TBG4 499 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 SUSD6Q92537 303 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 FAM167AQ96KS9 214 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 NIFKQ9BYG3 293 aaKnown RBP14.62□□□□□ -0.07
VRK3-203ENST00000424804 TMEM117Q9H0C3 514 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 S1PR5Q9H228 398 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 ATP6V0A4Q9HBG4 840 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 NRBP2Q9NSY0 501 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 MUTYHQ9UIF7 546 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 PCDHA4Q9UN74 947 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 CEP131Q9UPN4 1083 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 PCDHB12Q9Y5F1 795 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 GTF3C3Q9Y5Q9 886 aa14.62□□□□□ -0.07
VRK3-203ENST00000424804 ME3Q16798 604 aa14.61□□□□□ -0.07
VRK3-203ENST00000424804 LRCH2Q5VUJ6 765 aa14.61□□□□□ -0.07
VRK3-203ENST00000424804 TMEM184AQ6ZMB5 413 aa14.61□□□□□ -0.07
VRK3-203ENST00000424804 HFE2Q6ZVN8 426 aa14.61□□□□□ -0.07
VRK3-203ENST00000424804 DAGLBQ8NCG7 672 aa14.61□□□□□ -0.07
VRK3-203ENST00000424804 TLE6Q9H808 572 aa14.61□□□□□ -0.07
VRK3-203ENST00000424804 TLR9Q9NR96 1032 aa14.61□□□□□ -0.07
VRK3-203ENST00000424804 AKT3Q9Y243 479 aa14.61□□□□□ -0.07
VRK3-203ENST00000424804 LZTS1Q9Y250 596 aa14.61□□□□□ -0.07
VRK3-203ENST00000424804 USP15Q9Y4E8 981 aaPredicted RBP14.61□□□□□ -0.07
VRK3-203ENST00000424804 SAMM50Q9Y512 469 aa14.61□□□□□ -0.07
VRK3-203ENST00000424804 A0A0U1RQF3 1178 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 HIDE1A8MVS5 230 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 GAS7O60861 476 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 CSDE1O75534 798 aaKnown RBP14.6□□□□□ -0.07
VRK3-203ENST00000424804 SFNP31947 248 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 PBX3P40426 434 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 JAK3P52333 1124 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 SYCE2Q6PIF2 218 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 KCNT2Q6UVM3 1135 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 BLIDQ8IZY5 108 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 RDM1Q8NG50 284 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 MRPS27Q92552 414 aaKnown RBP14.6□□□□□ -0.07
VRK3-203ENST00000424804 SH2D3AQ9BRG2 576 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 TEKT3Q9BXF9 490 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 AAASQ9NRG9 546 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 ORC3Q9UBD5 711 aaPredicted RBP14.6□□□□□ -0.07
VRK3-203ENST00000424804 KCNJ14Q9UNX9 436 aa14.6□□□□□ -0.07
VRK3-203ENST00000424804 EML1O00423 815 aa14.59□□□□□ -0.07
VRK3-203ENST00000424804 CHMP2AO43633 222 aa14.59□□□□□ -0.07
VRK3-203ENST00000424804 SLC37A4O43826 429 aa14.59□□□□□ -0.07
VRK3-203ENST00000424804 XBP1P17861 261 aa14.59□□□□□ -0.07
VRK3-203ENST00000424804 LAG3P18627 525 aa14.59□□□□□ -0.07
VRK3-203ENST00000424804 SPOUT1Q5T280 376 aaKnown RBP14.59□□□□□ -0.07
VRK3-203ENST00000424804 MOXD1Q6UVY6 613 aa14.59□□□□□ -0.07
VRK3-203ENST00000424804 ANO5Q75V66 913 aa14.59□□□□□ -0.07
VRK3-203ENST00000424804 THNSL1Q8IYQ7 743 aa14.59□□□□□ -0.07
VRK3-203ENST00000424804 ZNF710Q8N1W2 664 aa14.59□□□□□ -0.07
VRK3-203ENST00000424804 EDAQ92838 391 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms