RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 DGAT1O75907 488 aa14.88□□□□□ -0.03
PRPF39-202ENST00000424478 MORC3Q14149 939 aa14.88□□□□□ -0.03
PRPF39-202ENST00000424478 L1TD1Q5T7N2 865 aaKnown RBP14.88□□□□□ -0.03
PRPF39-202ENST00000424478 FAM167AQ96KS9 214 aa14.88□□□□□ -0.03
PRPF39-202ENST00000424478 MAGEF1Q9HAY2 307 aa14.88□□□□□ -0.03
PRPF39-202ENST00000424478 PDLIM7Q9NR12 457 aa14.88□□□□□ -0.03
PRPF39-202ENST00000424478 TRIM49BA6NDI0 452 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 PRPF6O94906 941 aaKnown RBP14.87□□□□□ -0.03
PRPF39-202ENST00000424478 NFRKBQ6P4R8 1299 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 MTHFD1LQ6UB35 978 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 SENP6Q9GZR1 1112 aaPredicted RBP14.87□□□□□ -0.03
PRPF39-202ENST00000424478 MRPL44Q9H9J2 332 aaKnown RBP14.87□□□□□ -0.03
PRPF39-202ENST00000424478 LAMA3Q16787 3333 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 LOXHD1Q8IVV2 1947 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 TISP43B9A030 160 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 MAFO75444 373 aaPredicted RBP14.87□□□□□ -0.03
PRPF39-202ENST00000424478 XRCC6P12956 609 aaKnown RBP eCLIP14.87□□□□□ -0.03
PRPF39-202ENST00000424478 GLRA2P23416 452 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 PRCPP42785 496 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 SLC26A2P50443 739 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 DNAJB3Q8WWF6 145 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 CCDC34Q96HJ3 373 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 TRPV6Q9H1D0 765 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 PARVGQ9HBI0 331 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 AKT3Q9Y243 479 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 TULP1O00294 542 aaPredicted RBP14.87□□□□□ -0.03
PRPF39-202ENST00000424478 GCNT3O95395 438 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 GUCY2CP25092 1073 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 ITGA7Q13683 1181 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 FAM26FQ5R3K3 315 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 NT5DC1Q5TFE4 455 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 LRSAM1Q6UWE0 723 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 CCDC65Q8IXS2 484 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 GSDMAQ96QA5 445 aa14.87□□□□□ -0.03
PRPF39-202ENST00000424478 LRRIQ4A6NIV6 560 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 MSCO60682 206 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 PMS1P54277 932 aaKnown RBP14.86□□□□□ -0.03
PRPF39-202ENST00000424478 MED15Q96RN5 788 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 FIZ1Q96SL8 496 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 CDHR5Q9HBB8 845 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 STARD7Q9NQZ5 370 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 SUCLA2Q9P2R7 463 aaPredicted RBP14.86□□□□□ -0.03
PRPF39-202ENST00000424478 KBTBD13C9JR72 458 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 SLC26A4O43511 780 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 CTSHP09668 335 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 FGFR4P22455 802 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 MNX1P50219 401 aaPredicted RBP14.86□□□□□ -0.03
PRPF39-202ENST00000424478 NLRP12P59046 1061 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 KIZQ2M2Z5 673 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 FAM178BQ8IXR5 827 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 PCSK9Q8NBP7 692 aaKnown RBP14.86□□□□□ -0.03
PRPF39-202ENST00000424478 GLT1D1Q96MS3 346 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 OSBPL7Q9BZF2 842 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 CTNND2Q9UQB3 1225 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 PCDHA2Q9Y5H9 948 aa14.86□□□□□ -0.03
PRPF39-202ENST00000424478 K7ENM7 598 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 ZEB2O60315 1214 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 RHOBTB3O94955 611 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 CCDC192P0DO97 292 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 CYP2C9P11712 490 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 NPTX2P47972 431 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 EHHADHQ08426 723 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 CAPSQ13938 189 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 ARMC5Q96C12 935 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 CTAGE1Q96RT6 745 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 C17orf102A2RUQ5 167 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 TTLL13PA6NNM8 815 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 SGPL1O95470 568 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 CST5P28325 142 aaPredicted RBP14.85□□□□□ -0.03
PRPF39-202ENST00000424478 COL13A1Q5TAT6 717 aaPredicted RBP14.85□□□□□ -0.03
PRPF39-202ENST00000424478 LUZP1Q86V48 1076 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 CDR2LQ86X02 465 aaPredicted RBP14.85□□□□□ -0.03
PRPF39-202ENST00000424478 ARRDC4Q8NCT1 418 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 FRMD3A2A2Y4 597 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 PPP1R3GB7ZBB8 358 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 EDN1P05305 212 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 LAMTOR4Q0VGL1 99 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 STX1AQ16623 288 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 ZNF484Q5JVG2 852 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 KIAA0319LQ8IZA0 1049 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 RNF149Q8NC42 400 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 RBSNQ9H1K0 784 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 TSPY26PQ9H489 355 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 COL4A3BPQ9Y5P4 624 aa14.85□□□□□ -0.03
PRPF39-202ENST00000424478 NRCAMQ92823 1304 aa14.84□□□□□ -0.03
PRPF39-202ENST00000424478 EN2P19622 333 aaPredicted RBP14.84□□□□□ -0.03
PRPF39-202ENST00000424478 HOXD13P35453 343 aa14.84□□□□□ -0.03
PRPF39-202ENST00000424478 ZNF658Q5TYW1 1059 aaPredicted RBP14.84□□□□□ -0.03
PRPF39-202ENST00000424478 SCFD1Q8WVM8 642 aa14.84□□□□□ -0.03
PRPF39-202ENST00000424478 KATNAL1Q9BW62 490 aa14.84□□□□□ -0.03
PRPF39-202ENST00000424478 MINDY3Q9H8M7 445 aa14.84□□□□□ -0.03
PRPF39-202ENST00000424478 GTF2IRD1Q9UHL9 959 aa14.84□□□□□ -0.03
PRPF39-202ENST00000424478 OGDHLQ9ULD0 1010 aa14.84□□□□□ -0.03
PRPF39-202ENST00000424478 PLS3P13797 630 aa14.84□□□□□ -0.03
PRPF39-202ENST00000424478 ZNF445P59923 1031 aa14.84□□□□□ -0.03
PRPF39-202ENST00000424478 ELOA2Q8IYF1 753 aaPredicted RBP14.84□□□□□ -0.03
PRPF39-202ENST00000424478 MCPH1Q8NEM0 835 aa14.84□□□□□ -0.03
PRPF39-202ENST00000424478 SCLT1Q96NL6 688 aa14.84□□□□□ -0.03
PRPF39-202ENST00000424478 LRRC27Q9C0I9 530 aa14.84□□□□□ -0.03
PRPF39-202ENST00000424478 A0A087WZ62 844 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms