RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 CXorf56Q9H5V9 222 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 RETREG1Q9H6L5 497 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 SUN2Q9UH99 717 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 ARVCFO00192 962 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 CTAGE5O15320 804 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 CLASP2O75122 1294 aaKnown RBP3.44□□□□□ -1.86
PMS1-209ENST00000424059 ZNF888P0CJ79 500 aaPredicted RBP3.44□□□□□ -1.86
PMS1-209ENST00000424059 PTGS1P23219 599 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 AOAHP28039 575 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 IFT88Q13099 833 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 NRN1LQ496H8 165 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 PHF19Q5T6S3 580 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 AGBL4Q5VU57 503 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 ANKRD13BQ86YJ7 626 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 ZFPM1Q8IX07 1006 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 SH3RF2Q8TEC5 729 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 PTPRN2Q92932 1015 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 IPO9Q96P70 1041 aaKnown RBP3.44□□□□□ -1.86
PMS1-209ENST00000424059 PAGR1Q9BTK6 254 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 LRRC27Q9C0I9 530 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 SUDS3Q9H7L9 328 aaPredicted RBP3.44□□□□□ -1.86
PMS1-209ENST00000424059 GALNT8Q9NY28 637 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 MSRB2Q9Y3D2 182 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 HS3ST3A1Q9Y663 406 aa3.44□□□□□ -1.86
PMS1-209ENST00000424059 ESYT3A0FGR9 886 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 OVOL3O00110 214 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 TIMM44O43615 452 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 NEFHP12036 1026 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 SKILP12757 684 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 ZSCAN20P17040 1043 aaPredicted RBP3.43□□□□□ -1.86
PMS1-209ENST00000424059 ACRV1P26436 265 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 MCM7P33993 719 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 TBX4P57082 545 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 PTH1RQ03431 593 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 DUSP8Q13202 625 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 RASGRF1Q13972 1273 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 LONRF2Q1L5Z9 754 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 FAM47CQ5HY64 1035 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 ARHGAP36Q6ZRI8 547 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 MTDHQ86UE4 582 aaKnown RBP3.43□□□□□ -1.86
PMS1-209ENST00000424059 RBM12BQ8IXT5 1001 aaKnown RBP3.43□□□□□ -1.86
PMS1-209ENST00000424059 WNK4Q96J92 1243 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 RPS6KC1Q96S38 1066 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 BTBD2Q9BX70 525 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 TRIM55Q9BYV6 548 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 C22orf23Q9BZE7 217 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 CD244Q9BZW8 370 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 IFT122Q9HBG6 1241 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 SLC39A2Q9NP94 309 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 RRAGDQ9NQL2 400 aaPredicted RBP3.43□□□□□ -1.86
PMS1-209ENST00000424059 INCENPQ9NQS7 918 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 NR2E1Q9Y466 385 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 SCINQ9Y6U3 715 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 UNC13AQ9UPW8 1703 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 KIF16BQ96L93 1317 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 WDR33Q9C0J8 1336 aaKnown RBP3.43□□□□□ -1.86
PMS1-209ENST00000424059 TRBV23-1A0A0A0MS06 115 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 IPO5O00410 1097 aaKnown RBP3.43□□□□□ -1.86
PMS1-209ENST00000424059 MAN2B1O00754 1011 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 ZNF202O95125 648 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 FAM163BP0C2L3 166 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 ACO1P21399 889 aaKnown RBP3.43□□□□□ -1.86
PMS1-209ENST00000424059 GABREP78334 506 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 KLF10Q13118 480 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 EIF4HQ15056 248 aaKnown RBP3.43□□□□□ -1.86
PMS1-209ENST00000424059 EFCAB2Q5VUJ9 269 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 Q6ZSN1 163 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 NOP9Q86U38 636 aaKnown RBP3.43□□□□□ -1.86
PMS1-209ENST00000424059 CKAP2LQ8IYA6 745 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 PDILTQ8N807 584 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 WDR48Q8TAF3 677 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 CCDC113Q9H0I3 377 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 RIC8BQ9NVN3 520 aa3.43□□□□□ -1.86
PMS1-209ENST00000424059 TMA7Q9Y2S6 64 aaKnown RBP3.43□□□□□ -1.86
PMS1-209ENST00000424059 ASXL2Q76L83 1435 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 TCRBV5S4A2TA0A5A2 114 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 TLDC2A0PJX2 215 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 FAM90A27PA6NNH2 459 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 PES1O00541 588 aaKnown RBP3.42□□□□□ -1.86
PMS1-209ENST00000424059 C4BPAP04003 597 aaKnown RBP3.42□□□□□ -1.86
PMS1-209ENST00000424059 HMGCRP04035 888 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 ZNF853P0CG23 659 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 CAPN2P17655 700 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 CASQ1P31415 396 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 ABCD1P33897 745 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 TERF1P54274 439 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 HMGN5P82970 282 aaKnown RBP3.42□□□□□ -1.86
PMS1-209ENST00000424059 LACTBP83111 547 aaPredicted RBP3.42□□□□□ -1.86
PMS1-209ENST00000424059 CRY1Q16526 586 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 RNF151Q2KHN1 245 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 PLEKHG6Q3KR16 790 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 USP39Q53GS9 565 aaKnown RBP3.42□□□□□ -1.86
PMS1-209ENST00000424059 TMEM200BQ69YZ2 307 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 ADGRE4PQ86SQ3 457 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 ZSCAN30Q86W11 494 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 TTC30AQ86WT1 665 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 CCAR1Q8IX12 1150 aaKnown RBP3.42□□□□□ -1.86
PMS1-209ENST00000424059 PCDH19Q8TAB3 1148 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 AGAP3Q96P47 875 aa3.42□□□□□ -1.86
PMS1-209ENST00000424059 CDC5LQ99459 802 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms