RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 ASB2Q96Q27 587 aa17.35■□□□□ 0.37
SPC24-201ENST00000423327 CYP26B1Q9NR63 512 aa17.35■□□□□ 0.37
SPC24-201ENST00000423327 HCSTQ9UBK5 93 aa17.35■□□□□ 0.37
SPC24-201ENST00000423327 IBSPP21815 317 aaPredicted RBP17.34■□□□□ 0.37
SPC24-201ENST00000423327 BMPR1AP36894 532 aa17.34■□□□□ 0.37
SPC24-201ENST00000423327 HMGN5P82970 282 aaKnown RBP17.34■□□□□ 0.37
SPC24-201ENST00000423327 GPM6BQ13491 265 aa17.34■□□□□ 0.37
SPC24-201ENST00000423327 SLC24A5Q71RS6 500 aa17.34■□□□□ 0.37
SPC24-201ENST00000423327 DHX33Q9H6R0 707 aaKnown RBP17.34■□□□□ 0.37
SPC24-201ENST00000423327 C1orf112Q9NSG2 853 aa17.34■□□□□ 0.37
SPC24-201ENST00000423327 RNF19AQ9NV58 838 aa17.34■□□□□ 0.37
SPC24-201ENST00000423327 TCF20Q9UGU0 1960 aaKnown RBP17.33■□□□□ 0.37
SPC24-201ENST00000423327 PLXNA4Q9HCM2 1894 aa17.33■□□□□ 0.37
SPC24-201ENST00000423327 A0A087WZ62 844 aa17.33■□□□□ 0.36
SPC24-201ENST00000423327 DENND3A2RUS2 1198 aa17.33■□□□□ 0.36
SPC24-201ENST00000423327 POTEMA6NI47 508 aa17.33■□□□□ 0.36
SPC24-201ENST00000423327 GRM6O15303 877 aa17.33■□□□□ 0.36
SPC24-201ENST00000423327 SLITRK3O94933 977 aa17.33■□□□□ 0.36
SPC24-201ENST00000423327 STAG3L1P0CL83 205 aa17.33■□□□□ 0.36
SPC24-201ENST00000423327 YWHABP31946 246 aaKnown RBP17.33■□□□□ 0.36
SPC24-201ENST00000423327 FAM189BP81408 668 aa17.33■□□□□ 0.36
SPC24-201ENST00000423327 SKIV2LQ15477 1246 aaKnown RBP17.33■□□□□ 0.36
SPC24-201ENST00000423327 FAM102BQ5T8I3 360 aa17.33■□□□□ 0.36
SPC24-201ENST00000423327 KSR1Q8IVT5 923 aa17.33■□□□□ 0.36
SPC24-201ENST00000423327 NLRP7Q8WX94 980 aa17.33■□□□□ 0.36
SPC24-201ENST00000423327 MRPL38Q96DV4 380 aaKnown RBP17.33■□□□□ 0.36
SPC24-201ENST00000423327 HSD17B14Q9BPX1 270 aa17.33■□□□□ 0.36
SPC24-201ENST00000423327 EIF2AK1Q9BQI3 630 aaKnown RBP17.33■□□□□ 0.36
SPC24-201ENST00000423327 FDXACB1Q9BRP7 624 aaPredicted RBP17.33■□□□□ 0.36
SPC24-201ENST00000423327 FOXP1Q9H334 677 aaPredicted RBP17.33■□□□□ 0.36
SPC24-201ENST00000423327 TTC12Q9H892 705 aaPredicted RBP17.33■□□□□ 0.36
SPC24-201ENST00000423327 BMP2KQ9NSY1 1161 aaPredicted RBP17.33■□□□□ 0.36
SPC24-201ENST00000423327 MARCH6O60337 910 aa17.32■□□□□ 0.36
SPC24-201ENST00000423327 BAG4O95429 457 aaKnown RBP17.32■□□□□ 0.36
SPC24-201ENST00000423327 FGFR1P11362 822 aa17.32■□□□□ 0.36
SPC24-201ENST00000423327 ATF7P17544 494 aaPredicted RBP17.32■□□□□ 0.36
SPC24-201ENST00000423327 ATP2B1P20020 1258 aa17.32■□□□□ 0.36
SPC24-201ENST00000423327 MCM7P33993 719 aa17.32■□□□□ 0.36
SPC24-201ENST00000423327 TXKP42681 527 aa17.32■□□□□ 0.36
SPC24-201ENST00000423327 KCNQ1P51787 676 aa17.32■□□□□ 0.36
SPC24-201ENST00000423327 MRPS5P82675 430 aaKnown RBP17.32■□□□□ 0.36
SPC24-201ENST00000423327 CAMK1Q14012 370 aa17.32■□□□□ 0.36
SPC24-201ENST00000423327 ODR4Q5SWX8 454 aa17.32■□□□□ 0.36
SPC24-201ENST00000423327 CEP170P1Q96L14 293 aa17.32■□□□□ 0.36
SPC24-201ENST00000423327 TBC1D32Q96NH3 1257 aa17.32■□□□□ 0.36
SPC24-201ENST00000423327 XPNPEP1Q9NQW7 623 aa17.32■□□□□ 0.36
SPC24-201ENST00000423327 SUCLA2Q9P2R7 463 aaPredicted RBP17.32■□□□□ 0.36
SPC24-201ENST00000423327 PCDHA12Q9UN75 941 aa17.32■□□□□ 0.36
SPC24-201ENST00000423327 NCOR1O75376 2440 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 LYPLA2O95372 231 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 NBR1Q14596 966 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 SAFBQ15424 915 aaKnown RBP eCLIP17.31■□□□□ 0.36
SPC24-201ENST00000423327 FAM43BQ6ZT52 329 aaPredicted RBP17.31■□□□□ 0.36
SPC24-201ENST00000423327 RHPN2Q8IUC4 686 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 NOSTRINQ8IVI9 506 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 ZNF710Q8N1W2 664 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 TMEM143Q96AN5 459 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 TMX3Q96JJ7 454 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 SCLT1Q96NL6 688 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 ZSWIM4Q9H7M6 989 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 IFT122Q9HBG6 1241 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 TMEM161AQ9NX61 479 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 LRFN2Q9ULH4 789 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 RWDD3Q9Y3V2 267 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 PCDHB7Q9Y5E2 793 aa17.31■□□□□ 0.36
SPC24-201ENST00000423327 TBKBP1A7MCY6 615 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 DKC1O60832 514 aaKnown RBP eCLIP17.3■□□□□ 0.36
SPC24-201ENST00000423327 ITGB1P05556 798 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 RB1P06400 928 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 SPATA31C1P0DKV0 1188 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 BMP1P13497 986 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 DNAJB1P25685 340 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 EMC2Q15006 297 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 ZNF174Q15697 407 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 TCEAL5Q5H9L2 206 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 ZNF598Q86UK7 904 aaKnown RBP17.3■□□□□ 0.36
SPC24-201ENST00000423327 ZNF410Q86VK4 478 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 TPH2Q8IWU9 490 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 FAM184AQ8NB25 1140 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 NLRP4Q96MN2 994 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 C11orf84Q9BUA3 381 aaPredicted RBP17.3■□□□□ 0.36
SPC24-201ENST00000423327 ELAC1Q9H777 363 aaKnown RBP17.3■□□□□ 0.36
SPC24-201ENST00000423327 ALG13Q9NP73 1137 aaKnown RBP17.3■□□□□ 0.36
SPC24-201ENST00000423327 PPME1Q9Y570 386 aa17.3■□□□□ 0.36
SPC24-201ENST00000423327 A0A087WWV3 80 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 U2AF2P26368 475 aaKnown RBP eCLIP17.29■□□□□ 0.362e-9■□□□□ 10.7
SPC24-201ENST00000423327 RFC5P40937 340 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 DNM2P50570 870 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 TOB1P50616 345 aaPredicted RBP17.29■□□□□ 0.36
SPC24-201ENST00000423327 POLGP54098 1239 aaPredicted RBP17.29■□□□□ 0.36
SPC24-201ENST00000423327 PTPROQ16827 1216 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 XKR9Q5GH70 373 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 TTC38Q5R3I4 469 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 ECHDC2Q86YB7 292 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 C4orf32Q8N8J7 132 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 SLC7A3Q8WY07 619 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 P2RX5Q93086 422 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 HLA-CQ95604 372 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 CASD1Q96PB1 797 aa17.29■□□□□ 0.36
SPC24-201ENST00000423327 PLVAPQ9BX97 442 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms