RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 SMAD2Q15796 467 aaKnown RBP13□□□□□ -0.33
SQSTM1-203ENST00000422245 FAM102BQ5T8I3 360 aa13□□□□□ -0.33
SQSTM1-203ENST00000422245 ADHFE1Q8IWW8 467 aa13□□□□□ -0.33
SQSTM1-203ENST00000422245 THNSL1Q8IYQ7 743 aa13□□□□□ -0.33
SQSTM1-203ENST00000422245 LRRC43Q8N309 656 aa13□□□□□ -0.33
SQSTM1-203ENST00000422245 EFHBQ8N7U6 833 aa13□□□□□ -0.33
SQSTM1-203ENST00000422245 NLRP7Q8WX94 980 aa13□□□□□ -0.33
SQSTM1-203ENST00000422245 GJA10Q969M2 543 aa13□□□□□ -0.33
SQSTM1-203ENST00000422245 AIFM3Q96NN9 605 aa13□□□□□ -0.33
SQSTM1-203ENST00000422245 POP1Q99575 1024 aaKnown RBP13□□□□□ -0.33
SQSTM1-203ENST00000422245 LARP6Q9BRS8 491 aaKnown RBP13□□□□□ -0.33
SQSTM1-203ENST00000422245 LRFN3Q9BTN0 628 aa13□□□□□ -0.33
SQSTM1-203ENST00000422245 NIFKQ9BYG3 293 aaKnown RBP13□□□□□ -0.33
SQSTM1-203ENST00000422245 TMEM117Q9H0C3 514 aa13□□□□□ -0.33
SQSTM1-203ENST00000422245 SLKQ9H2G2 1235 aaPredicted RBP13□□□□□ -0.33
SQSTM1-203ENST00000422245 CD207Q9UJ71 328 aa13□□□□□ -0.33
SQSTM1-203ENST00000422245 HCN4Q9Y3Q4 1203 aa13□□□□□ -0.33
SQSTM1-203ENST00000422245 PFKFB2O60825 505 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 GTF2F1P35269 517 aaKnown RBP eCLIP12.99□□□□□ -0.339e-8■■■■■ 28.6
SQSTM1-203ENST00000422245 IRS1P35568 1242 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 DLX2Q07687 328 aaPredicted RBP12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 SCRN1Q12765 414 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 ADAM15Q13444 863 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 ANKRD1Q15327 319 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 CLUL1Q15846 466 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 INF2Q27J81 1249 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 MTERF2Q49AM1 385 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 ABI1Q8IZP0 508 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 COLGALT1Q8NBJ5 622 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 NAP1L4Q99733 375 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 PHF20Q9BVI0 1012 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 IGFLR1Q9H665 355 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 TLR9Q9NR96 1032 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 TYW1Q9NV66 732 aaKnown RBP12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 DACT1Q9NYF0 836 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 KCNJ14Q9UNX9 436 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 LZTS1Q9Y250 596 aa12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 ARIH1Q9Y4X5 557 aaPredicted RBP12.99□□□□□ -0.33
SQSTM1-203ENST00000422245 IGKV6-21A0A0C4DH24 114 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 LINC01565O15544 149 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 MBTPS2O43462 519 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 SLC37A4O43826 429 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 DKC1O60832 514 aaKnown RBP eCLIP12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 FGF18O76093 207 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 SFPQP23246 707 aaKnown RBP eCLIP12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 PPM1AP35813 382 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 NRIP1P48552 1158 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 DNM2P50570 870 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 PSMC5P62195 406 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 PPP2R5CQ13362 524 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 LETM2Q2VYF4 491 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 PPP4R3AQ6IN85 833 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 PDE12Q6L8Q7 609 aaKnown RBP12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 ADGRD2Q7Z7M1 963 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 NEK8Q86SG6 692 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 ECHDC2Q86YB7 292 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 RSPH1Q8WYR4 309 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 WASF1Q92558 559 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 FAM20AQ96MK3 541 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 CDCA3Q99618 268 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 JPH2Q9BR39 696 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 GCOM2Q9BZD3 368 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 CWH43Q9H720 699 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 KCNMB3Q9NPA1 279 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 C11orf16Q9NQ32 467 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 HCSTQ9UBK5 93 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 RAPGEFL1Q9UHV5 662 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 TPCN1Q9ULQ1 816 aa12.98□□□□□ -0.33
SQSTM1-203ENST00000422245 A0A0U1RQF3 1178 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 FAM86C2PA6NEL3 165 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 TBX3O15119 743 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 DCXO43602 365 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 STBD1O95210 358 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 EYA4O95677 639 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 COASYQ13057 564 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 DRP2Q13474 957 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 ZNF410Q86VK4 478 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 SMRP1Q8NCR6 262 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 MICAL1Q8TDZ2 1067 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 ZNF668Q96K58 619 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 MSLNLQ96KJ4 702 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 ZNF558Q96NG5 402 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 CASD1Q96PB1 797 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 CEP89Q96ST8 783 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 MRPL9Q9BYD2 267 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 CHST12Q9NRB3 414 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 RNF19AQ9NV58 838 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 VAV3Q9UKW4 847 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 PPME1Q9Y570 386 aa12.97□□□□□ -0.33
SQSTM1-203ENST00000422245 TMEM150BA6NC51 233 aa12.96□□□□□ -0.33
SQSTM1-203ENST00000422245 DDX11L8A8MPP1 907 aa12.96□□□□□ -0.33
SQSTM1-203ENST00000422245 PRR33A8MZF0 331 aa12.96□□□□□ -0.33
SQSTM1-203ENST00000422245 FSCN2O14926 492 aa12.96□□□□□ -0.33
SQSTM1-203ENST00000422245 EIF5BO60841 1220 aaKnown RBP12.96□□□□□ -0.33
SQSTM1-203ENST00000422245 MAFO75444 373 aaPredicted RBP12.96□□□□□ -0.33
SQSTM1-203ENST00000422245 EOMESO95936 686 aa12.96□□□□□ -0.33
SQSTM1-203ENST00000422245 SRGAP2BP0DMP2 458 aa12.96□□□□□ -0.33
SQSTM1-203ENST00000422245 PLA2G5P39877 138 aa12.96□□□□□ -0.33
SQSTM1-203ENST00000422245 QARSP47897 775 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms