RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 ZBTB39O15060 712 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 STAG3L1P0CL83 205 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 ATP2B1P20020 1258 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 MCM7P33993 719 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 TRAPPC10P48553 1259 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 CTTNQ14247 550 aaKnown RBP16.6■□□□□ 0.25
LINC01840-201ENST00000421870 TPH2Q8IWU9 490 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 TMEM192Q8IY95 271 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 FIBCD1Q8N539 461 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 C4orf32Q8N8J7 132 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 NEK9Q8TD19 979 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 PPM1EQ8WY54 764 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 CEP170P1Q96L14 293 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 RNF216Q9NWF9 866 aaPredicted RBP16.6■□□□□ 0.25
LINC01840-201ENST00000421870 SUCLA2Q9P2R7 463 aaPredicted RBP16.6■□□□□ 0.25
LINC01840-201ENST00000421870 MTUS1Q9ULD2 1270 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 ADGRA3Q8IWK6 1321 aa16.6■□□□□ 0.25
LINC01840-201ENST00000421870 FNDC1Q4ZHG4 1894 aaPredicted RBP16.6■□□□□ 0.25
LINC01840-201ENST00000421870 C5orf67F2Z3F1 127 aa16.59■□□□□ 0.25
LINC01840-201ENST00000421870 H3BNC9 293 aa16.59■□□□□ 0.25
LINC01840-201ENST00000421870 XRCC6P12956 609 aaKnown RBP eCLIP16.59■□□□□ 0.25
LINC01840-201ENST00000421870 RFC5P40937 340 aa16.59■□□□□ 0.25
LINC01840-201ENST00000421870 TOB1P50616 345 aaPredicted RBP16.59■□□□□ 0.25
LINC01840-201ENST00000421870 CYP4A11Q02928 519 aa16.59■□□□□ 0.25
LINC01840-201ENST00000421870 ZNF174Q15697 407 aa16.59■□□□□ 0.25
LINC01840-201ENST00000421870 FBXO22Q8NEZ5 403 aa16.59■□□□□ 0.25
LINC01840-201ENST00000421870 GDPD5Q8WTR4 605 aa16.59■□□□□ 0.25
LINC01840-201ENST00000421870 ELAC1Q9H777 363 aaKnown RBP16.59■□□□□ 0.25
LINC01840-201ENST00000421870 ANKEF1Q9NU02 776 aa16.59■□□□□ 0.25
LINC01840-201ENST00000421870 KIF3AQ9Y496 699 aa16.59■□□□□ 0.25
LINC01840-201ENST00000421870 PCDHB7Q9Y5E2 793 aa16.59■□□□□ 0.25
LINC01840-201ENST00000421870 A0A087WZ62 844 aa16.58■□□□□ 0.24
LINC01840-201ENST00000421870 DENND3A2RUS2 1198 aa16.58■□□□□ 0.24
LINC01840-201ENST00000421870 GAS2O43903 313 aaKnown RBP16.58■□□□□ 0.24
LINC01840-201ENST00000421870 RB1P06400 928 aa16.58■□□□□ 0.24
LINC01840-201ENST00000421870 BMPR1AP36894 532 aa16.58■□□□□ 0.24
LINC01840-201ENST00000421870 BTG3Q14201 252 aaPredicted RBP16.58■□□□□ 0.24
LINC01840-201ENST00000421870 TTC38Q5R3I4 469 aa16.58■□□□□ 0.24
LINC01840-201ENST00000421870 ZNF410Q86VK4 478 aa16.58■□□□□ 0.24
LINC01840-201ENST00000421870 CMTR2Q8IYT2 770 aaKnown RBP16.58■□□□□ 0.24
LINC01840-201ENST00000421870 NLRP7Q8WX94 980 aa16.58■□□□□ 0.24
LINC01840-201ENST00000421870 SLC7A3Q8WY07 619 aa16.58■□□□□ 0.24
LINC01840-201ENST00000421870 ZNF668Q96K58 619 aaPredicted RBP16.58■□□□□ 0.24
LINC01840-201ENST00000421870 FDXACB1Q9BRP7 624 aaPredicted RBP16.58■□□□□ 0.24
LINC01840-201ENST00000421870 GCOM2Q9BZD3 368 aaPredicted RBP16.58■□□□□ 0.24
LINC01840-201ENST00000421870 PRDM6Q9NQX0 595 aa16.58■□□□□ 0.24
LINC01840-201ENST00000421870 SPATA31C1P0DKV0 1188 aa16.57■□□□□ 0.24
LINC01840-201ENST00000421870 TECP42680 631 aa16.57■□□□□ 0.24
LINC01840-201ENST00000421870 GNL2Q13823 731 aaKnown RBP16.57■□□□□ 0.24
LINC01840-201ENST00000421870 XKR9Q5GH70 373 aa16.57■□□□□ 0.24
LINC01840-201ENST00000421870 RHPN2Q8IUC4 686 aa16.57■□□□□ 0.24
LINC01840-201ENST00000421870 KSR1Q8IVT5 923 aa16.57■□□□□ 0.24
LINC01840-201ENST00000421870 ATXN2LQ8WWM7 1075 aaKnown RBP16.57■□□□□ 0.24
LINC01840-201ENST00000421870 PRPF31Q8WWY3 499 aaKnown RBP16.57■□□□□ 0.24
LINC01840-201ENST00000421870 INO80BQ9C086 356 aaPredicted RBP16.57■□□□□ 0.24
LINC01840-201ENST00000421870 IFT122Q9HBG6 1241 aa16.57■□□□□ 0.24
LINC01840-201ENST00000421870 CHST12Q9NRB3 414 aa16.57■□□□□ 0.24
LINC01840-201ENST00000421870 TMEM161AQ9NX61 479 aa16.57■□□□□ 0.24
LINC01840-201ENST00000421870 LRFN2Q9ULH4 789 aa16.57■□□□□ 0.24
LINC01840-201ENST00000421870 NOL7Q9UMY1 257 aaKnown RBP16.57■□□□□ 0.24
LINC01840-201ENST00000421870 RWDD3Q9Y3V2 267 aa16.57■□□□□ 0.24
LINC01840-201ENST00000421870 KIAA1671Q9BY89 1806 aa16.56■□□□□ 0.24
LINC01840-201ENST00000421870 POTEMA6NI47 508 aa16.56■□□□□ 0.24
LINC01840-201ENST00000421870 ASAP2O43150 1006 aa16.56■□□□□ 0.24
LINC01840-201ENST00000421870 CSDE1O75534 798 aaKnown RBP16.56■□□□□ 0.24
LINC01840-201ENST00000421870 OR52Z1P0C646 297 aa16.56■□□□□ 0.24
LINC01840-201ENST00000421870 ZSCAN20P17040 1043 aaPredicted RBP16.56■□□□□ 0.24
LINC01840-201ENST00000421870 GJB2P29033 226 aa16.56■□□□□ 0.24
LINC01840-201ENST00000421870 POLGP54098 1239 aaPredicted RBP16.56■□□□□ 0.24
LINC01840-201ENST00000421870 GPM6BQ13491 265 aa16.56■□□□□ 0.24
LINC01840-201ENST00000421870 CATSPER3Q86XQ3 398 aa16.56■□□□□ 0.24
LINC01840-201ENST00000421870 TCP11Q8WWU5 503 aa16.56■□□□□ 0.24
LINC01840-201ENST00000421870 POLR3CQ9BUI4 534 aaPredicted RBP16.56■□□□□ 0.24
LINC01840-201ENST00000421870 TRAIPQ9BWF2 469 aa16.56■□□□□ 0.24
LINC01840-201ENST00000421870 TUFT1Q9NNX1 390 aa16.56■□□□□ 0.24
LINC01840-201ENST00000421870 A0A0U1RQF3 1178 aa16.55■□□□□ 0.24
LINC01840-201ENST00000421870 FGFR4P22455 802 aa16.55■□□□□ 0.24
LINC01840-201ENST00000421870 RARRES1P49788 294 aa16.55■□□□□ 0.24
LINC01840-201ENST00000421870 FXR2P51116 673 aaKnown RBP eCLIP16.55■□□□□ 0.24
LINC01840-201ENST00000421870 CUL4AQ13619 759 aa16.55■□□□□ 0.24
LINC01840-201ENST00000421870 PDIA5Q14554 519 aa16.55■□□□□ 0.24
LINC01840-201ENST00000421870 FAM102BQ5T8I3 360 aa16.55■□□□□ 0.24
LINC01840-201ENST00000421870 PSPC1Q8WXF1 523 aaKnown RBP16.55■□□□□ 0.24
LINC01840-201ENST00000421870 P2RX5Q93086 422 aa16.55■□□□□ 0.24
LINC01840-201ENST00000421870 TMEM143Q96AN5 459 aa16.55■□□□□ 0.24
LINC01840-201ENST00000421870 MRPL38Q96DV4 380 aaKnown RBP16.55■□□□□ 0.24
LINC01840-201ENST00000421870 PLVAPQ9BX97 442 aa16.55■□□□□ 0.24
LINC01840-201ENST00000421870 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.55■□□□□ 0.24
LINC01840-201ENST00000421870 PCDHB6Q9Y5E3 794 aa16.55■□□□□ 0.24
LINC01840-201ENST00000421870 COL4A3BPQ9Y5P4 624 aa16.55■□□□□ 0.24
LINC01840-201ENST00000421870 MRPL42Q9Y6G3 142 aaKnown RBP16.55■□□□□ 0.24
LINC01840-201ENST00000421870 XIRP2A4UGR9 3374 aa16.54■□□□□ 0.24
LINC01840-201ENST00000421870 DGAT1O75907 488 aa16.54■□□□□ 0.24
LINC01840-201ENST00000421870 EOMESO95936 686 aa16.54■□□□□ 0.24
LINC01840-201ENST00000421870 RPA1P27694 616 aa16.54■□□□□ 0.24
LINC01840-201ENST00000421870 CTNNB1P35222 781 aa16.54■□□□□ 0.24
LINC01840-201ENST00000421870 GATMP50440 423 aa16.54■□□□□ 0.24
LINC01840-201ENST00000421870 POU5F1BQ06416 359 aa16.54■□□□□ 0.24
LINC01840-201ENST00000421870 LAMTOR4Q0VGL1 99 aa16.54■□□□□ 0.24
LINC01840-201ENST00000421870 PTGDRQ13258 359 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms