RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 GCLMP48507 274 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 MARSP56192 900 aaKnown RBP11.95□□□□□ -0.5
DDX56-203ENST00000421223 DLG4P78352 724 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 HSP90B2PQ58FF3 399 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 DAW1Q8N136 415 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 SPATA4Q8NEY3 305 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 RIT2Q99578 217 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 CBWD1Q9BRT8 395 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 TLR10Q9BXR5 811 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 SLC38A10Q9HBR0 1119 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 AGO4Q9HCK5 861 aaKnown RBP11.95□□□□□ -0.5
DDX56-203ENST00000421223 DMGDHQ9UI17 866 aaKnown RBP11.95□□□□□ -0.5
DDX56-203ENST00000421223 DNAJC12Q9UKB3 198 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 SYNPO2Q9UMS6 1093 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 CTNND1O60716 968 aaKnown RBP11.94□□□□□ -0.5
DDX56-203ENST00000421223 MYBL2P10244 700 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 KRT13P13646 458 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 HSD17B4P51659 736 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 GPS2Q13227 327 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 SKIDA1Q1XH10 827 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 IRF2BP2Q7Z5L9 587 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 GLYCTKQ8IVS8 523 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 MTMR14Q8NCE2 650 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 LPAR1Q92633 364 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 KIAA1683Q9H0B3 1180 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 PGAP2Q9UHJ9 254 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 PPP1R9AQ9ULJ8 1098 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 L1RE1Q9UN81 338 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 USP20Q9Y2K6 914 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 LRRIQ3A6PVS8 624 aaPredicted RBP11.94□□□□□ -0.5
DDX56-203ENST00000421223 KCNK3O14649 394 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 BACH1O14867 736 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 SLC26A4O43511 780 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 STAT1P42224 750 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 FMO5P49326 533 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 DRAP1Q14919 205 aaPredicted RBP11.94□□□□□ -0.5
DDX56-203ENST00000421223 PGM5Q15124 567 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 KLHL7Q8IXQ5 586 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 SLC16A10Q8TF71 515 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 IFT81Q8WYA0 676 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 TAF4BQ92750 862 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 AIPL1Q9NZN9 384 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 RAB21Q9UL25 225 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 TELO2Q9Y4R8 837 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 ZMYM2Q9UBW7 1377 aa11.94□□□□□ -0.5
DDX56-203ENST00000421223 ESYT3A0FGR9 886 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 TCP1P17987 556 aaKnown RBP11.93□□□□□ -0.5
DDX56-203ENST00000421223 HOXA7P31268 230 aaPredicted RBP11.93□□□□□ -0.5
DDX56-203ENST00000421223 RARRES1P49788 294 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 NLRX1Q86UT6 975 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 VPS36Q86VN1 386 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 TXLNBQ8N3L3 684 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 FBXO41Q8TF61 875 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 RIN2Q8WYP3 895 aaPredicted RBP11.93□□□□□ -0.5
DDX56-203ENST00000421223 SAAL1Q96ER3 474 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 FAM84AQ96KN4 292 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 RBM12Q9NTZ6 932 aaKnown RBP11.93□□□□□ -0.5
DDX56-203ENST00000421223 CHORDC1Q9UHD1 332 aaPredicted RBP11.93□□□□□ -0.5
DDX56-203ENST00000421223 FRMPD4Q14CM0 1322 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 VWA5AO00534 786 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 DHX15O43143 795 aaKnown RBP11.93□□□□□ -0.5
DDX56-203ENST00000421223 EVI5O60447 810 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 TGFB2P61812 414 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 MYL7Q01449 175 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 ZNF662Q6ZS27 426 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 HAUS6Q7Z4H7 955 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 ZBED3Q96IU2 234 aaPredicted RBP11.93□□□□□ -0.5
DDX56-203ENST00000421223 PDCD2LQ9BRP1 358 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 NAGPAQ9UK23 515 aa11.93□□□□□ -0.5
DDX56-203ENST00000421223 EMSYQ7Z589 1322 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 EIF3JO75822 258 aaKnown RBP11.92□□□□□ -0.5
DDX56-203ENST00000421223 LCA5LO95447 670 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 NAB2Q15742 525 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 SYN2Q92777 582 aaPredicted RBP11.92□□□□□ -0.5
DDX56-203ENST00000421223 FIZ1Q96SL8 496 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 UBE2TQ9NPD8 197 aaPredicted RBP11.92□□□□□ -0.5
DDX56-203ENST00000421223 EIF3DO15371 548 aaKnown RBP eCLIP11.92□□□□□ -0.5
DDX56-203ENST00000421223 CEP104O60308 925 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 CCNE2O96020 404 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 NR3C2P08235 984 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 LMAN1P49257 510 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 BACE1P56817 501 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 TUBB4BP68371 445 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 MAPK7Q13164 816 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 PRPF4BQ13523 1007 aaKnown RBP11.92□□□□□ -0.5
DDX56-203ENST00000421223 BMT2Q1RMZ1 405 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 C8orf74Q6P047 294 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 FOXR2Q6PJQ5 311 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 SND1Q7KZF4 910 aaKnown RBP eCLIP11.92□□□□□ -0.5
DDX56-203ENST00000421223 ZNF280CQ8ND82 737 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 TRPM4Q8TD43 1214 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 CEP170P1Q96L14 293 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 SIX2Q9NPC8 291 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 GGA3Q9NZ52 723 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 GABBR1Q9UBS5 961 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 ODF2LQ9ULJ1 636 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 FAN1Q9Y2M0 1017 aa11.92□□□□□ -0.5
DDX56-203ENST00000421223 ZSCAN5CA6NGD5 496 aaPredicted RBP11.92□□□□□ -0.5
DDX56-203ENST00000421223 SLC16A3O15427 465 aaKnown RBP11.92□□□□□ -0.5
DDX56-203ENST00000421223 PLA2G6O60733 806 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms