RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 PDZD8Q8NEN9 1154 aa11.9□□□□□ -0.5
FN1-207ENST00000421182 CETPP11597 493 aa11.9□□□□□ -0.51
FN1-207ENST00000421182 SNX17Q15036 470 aa11.9□□□□□ -0.51
FN1-207ENST00000421182 RHPN2Q8IUC4 686 aa11.9□□□□□ -0.51
FN1-207ENST00000421182 TXNDC9O14530 226 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 CYP21A2P08686 494 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 OSTNP61366 133 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 NAALADL2Q58DX5 795 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 KCTD17Q8N5Z5 321 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 STKLD1Q8NE28 680 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 FAM96AQ9H5X1 160 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 CCNE1P24864 410 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 MCAMP43121 646 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 ITPRIPL1Q6GPH6 555 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 RABEP2Q9H5N1 569 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 LSM7Q9UK45 103 aaKnown RBP11.89□□□□□ -0.51
FN1-207ENST00000421182 UBN2Q6ZU65 1347 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 CITO14578 2027 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 P4HBP07237 508 aaKnown RBP11.89□□□□□ -0.51
FN1-207ENST00000421182 TFDP2Q14188 446 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 ALX1Q15699 326 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 ZNF280CQ8ND82 737 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 MRPL40Q9NQ50 206 aaKnown RBP11.89□□□□□ -0.51
FN1-207ENST00000421182 MAFGO15525 162 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 ZBED6P86452 979 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 CUL1Q13616 776 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 TTC30AQ86WT1 665 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 ANKRD42Q8N9B4 389 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 TEX13BQ9BXU2 312 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 RPAP3Q9H6T3 665 aaPredicted RBP11.89□□□□□ -0.51
FN1-207ENST00000421182 TDRD3Q9H7E2 651 aaKnown RBP11.89□□□□□ -0.51
FN1-207ENST00000421182 TJP2Q9UDY2 1190 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 INPP5FQ9Y2H2 1132 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 PPME1Q9Y570 386 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 DEPDC5O75140 1603 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 GNGT2O14610 69 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 HOXC6P09630 235 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 BASP1P80723 227 aaKnown RBP11.89□□□□□ -0.51
FN1-207ENST00000421182 PDCD2Q16342 344 aaPredicted RBP11.89□□□□□ -0.51
FN1-207ENST00000421182 LONRF3Q496Y0 759 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 BARGINQ6ZT62 677 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 NSUN7Q8NE18 718 aaKnown RBP11.89□□□□□ -0.51
FN1-207ENST00000421182 CLIC6Q96NY7 704 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 STRBPQ96SI9 672 aaKnown RBP11.89□□□□□ -0.51
FN1-207ENST00000421182 PUS7LQ9H0K6 701 aaKnown RBP11.89□□□□□ -0.51
FN1-207ENST00000421182 SMARCAD1Q9H4L7 1026 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 PCIF1Q9H4Z3 704 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 TUFT1Q9NNX1 390 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 CLIC2O15247 247 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 SNX2O60749 519 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 CD58P19256 250 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 DEUP1Q05D60 604 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 NRBF2Q96F24 287 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 PRDM5Q9NQX1 630 aaPredicted RBP11.89□□□□□ -0.51
FN1-207ENST00000421182 KCND2Q9NZV8 630 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 SPP2Q13103 211 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 MORC4Q8TE76 937 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 WHAMMQ8TF30 809 aa11.89□□□□□ -0.51
FN1-207ENST00000421182 MEIS1O00470 390 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 HIP1RO75146 1068 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 GADD45BO75293 160 aaPredicted RBP11.88□□□□□ -0.51
FN1-207ENST00000421182 MUM1Q2TAK8 710 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 TSPYL2Q9H2G4 693 aaPredicted RBP11.88□□□□□ -0.51
FN1-207ENST00000421182 SPATA31A1Q5TZJ5 1347 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 GIPC2Q8TF65 315 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 CEP95Q96GE4 821 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 LRRC37BQ96QE4 947 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 SLC4A7Q9Y6M7 1214 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 SEC24BO95487 1268 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 SLC4A1P02730 911 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 WASHC5Q12768 1159 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 KLHL8Q9P2G9 620 aaPredicted RBP11.88□□□□□ -0.51
FN1-207ENST00000421182 SUCLA2Q9P2R7 463 aaPredicted RBP11.88□□□□□ -0.51
FN1-207ENST00000421182 PXDNLA1KZ92 1463 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 MIF4GDA9UHW6 222 aaKnown RBP11.88□□□□□ -0.51
FN1-207ENST00000421182 POC1B-GALNT4F8VUJ3 575 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 GFPT2O94808 682 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 CYP19A1P11511 503 aaPredicted RBP11.88□□□□□ -0.51
FN1-207ENST00000421182 ZNF157P51786 506 aaPredicted RBP11.88□□□□□ -0.51
FN1-207ENST00000421182 SDE2Q6IQ49 451 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 XRRA1Q6P2D8 792 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 MYRIPQ8NFW9 859 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 ZFP91Q96JP5 570 aaPredicted RBP11.88□□□□□ -0.51
FN1-207ENST00000421182 BHMT2Q9H2M3 363 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 SP110Q9HB58 689 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 TAF1CQ15572 869 aaPredicted RBP11.88□□□□□ -0.51
FN1-207ENST00000421182 RNF180Q86T96 592 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 OLFML3Q9NRN5 406 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 SETD1AO15047 1707 aaKnown RBP11.88□□□□□ -0.51
FN1-207ENST00000421182 SERPINB6P35237 376 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 PADI6Q6TGC4 694 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 LZICQ8WZA0 190 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 PANX2Q96RD6 677 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 FMO2Q99518 471 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 KIF2CQ99661 725 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 DDX56Q9NY93 547 aaKnown RBP11.88□□□□□ -0.51
FN1-207ENST00000421182 TRIM33Q9UPN9 1127 aa11.88□□□□□ -0.51
FN1-207ENST00000421182 UBE4BO95155 1302 aa11.87□□□□□ -0.51
FN1-207ENST00000421182 GOLGA8MH3BSY2 632 aa11.87□□□□□ -0.51
FN1-207ENST00000421182 ARHGDIAP52565 204 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms