RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CEP63Q96MT8 703 aa11.58□□□□□ -0.56
PTCH1-206ENST00000421141 TSPYL2Q9H2G4 693 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-206ENST00000421141 GAS2O43903 313 aaKnown RBP11.58□□□□□ -0.56
PTCH1-206ENST00000421141 MAN1A1P33908 653 aa11.58□□□□□ -0.56
PTCH1-206ENST00000421141 SMC6Q96SB8 1091 aa11.58□□□□□ -0.56
PTCH1-206ENST00000421141 DDX50Q9BQ39 737 aaKnown RBP11.58□□□□□ -0.56
PTCH1-206ENST00000421141 PFDN4Q9NQP4 134 aa11.58□□□□□ -0.56
PTCH1-206ENST00000421141 MYH7P12883 1935 aa11.58□□□□□ -0.56
PTCH1-206ENST00000421141 SALL1Q9NSC2 1324 aa11.58□□□□□ -0.56
PTCH1-206ENST00000421141 BAZ2AQ9UIF9 1905 aaKnown RBP11.57□□□□□ -0.56
PTCH1-206ENST00000421141 RESTQ13127 1097 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 LONRF3Q496Y0 759 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 FKBP1CQ5VVH2 108 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 DENND2CQ68D51 928 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 TRIM31Q9BZY9 425 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 ALDH8A1Q9H2A2 487 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-206ENST00000421141 EHD2Q9NZN4 543 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 CPA4Q9UI42 421 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-206ENST00000421141 NR3C1P04150 777 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 STAG3L1P0CL83 205 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 GRAMD1CQ8IYS0 662 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 P3H4Q92791 437 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 FAM205AQ6ZU69 1335 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 PHRF1Q9P1Y6 1649 aaKnown RBP11.57□□□□□ -0.56
PTCH1-206ENST00000421141 HOXC6P09630 235 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 DDR1Q08345 913 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 KNOP1Q1ED39 458 aaKnown RBP11.57□□□□□ -0.56
PTCH1-206ENST00000421141 NAALADL2Q58DX5 795 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 TOGARAM2Q6ZUX3 1019 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 CLEC10AQ8IUN9 316 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 SAMD3Q8N6K7 520 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 GMCL1P1Q8NEA9 526 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 MOV10L1Q9BXT6 1211 aaKnown RBP11.57□□□□□ -0.56
PTCH1-206ENST00000421141 RBSNQ9H1K0 784 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 PLCB1Q9NQ66 1216 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 AGO2Q9UKV8 859 aaKnown RBP11.57□□□□□ -0.56
PTCH1-206ENST00000421141 CYP27A1Q02318 531 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 NOTUMQ6P988 496 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 LRRC31Q6UY01 552 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 LCMT1Q9UIC8 334 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 KRIT1O00522 736 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 NKRFO15226 690 aaKnown RBP eCLIP11.57□□□□□ -0.56
PTCH1-206ENST00000421141 BFSP2Q13515 415 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 RUFY4Q6ZNE9 571 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 IGDCC4Q8TDY8 1250 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 TDP2O95551 362 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 CCNE1P24864 410 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 HOXA10P31260 410 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-206ENST00000421141 PDIA5Q14554 519 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 RWDD4Q6NW29 188 aaKnown RBP11.57□□□□□ -0.56
PTCH1-206ENST00000421141 VPS52Q8N1B4 723 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 AFG3L2Q9Y4W6 797 aa11.57□□□□□ -0.56
PTCH1-206ENST00000421141 DOT1LQ8TEK3 1739 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 SGK1O00141 431 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 PPATQ06203 517 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 COASYQ13057 564 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 CC2D1AQ6P1N0 951 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-206ENST00000421141 ERICH1Q86X53 443 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 AGBL1Q96MI9 1066 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 MXRA8Q9BRK3 442 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 KIAA0391O15091 583 aaKnown RBP11.56□□□□□ -0.56
PTCH1-206ENST00000421141 TBX3O15119 743 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 GFPT2O94808 682 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 RPS6P62753 249 aaKnown RBP11.56□□□□□ -0.56
PTCH1-206ENST00000421141 SEMA3FQ13275 785 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 MESDQ14696 234 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 OR6B2Q6IFH4 312 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 SFR1Q86XK3 245 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 MRRFQ96E11 262 aaKnown RBP11.56□□□□□ -0.56
PTCH1-206ENST00000421141 ADCY8P40145 1251 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 THPOP40225 353 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 RFX5P48382 616 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-206ENST00000421141 DEFB115Q30KQ5 88 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 EFCAB12Q6NXP0 572 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 GPD1LQ8N335 351 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 CCNYQ8ND76 341 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 RTFDC1Q9BY42 306 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-206ENST00000421141 STRIP2Q9ULQ0 834 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 SAR1BQ9Y6B6 198 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 ESYT2A0FGR8 921 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 ADM5C9JUS6 153 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 EYA4O95677 639 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 PRKCBP05771 671 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 CYP2C9P11712 490 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 ALDH7A1P49419 539 aaKnown RBP11.56□□□□□ -0.56
PTCH1-206ENST00000421141 VAMP7P51809 220 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 TEX2Q8IWB9 1127 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 STARD7Q9NQZ5 370 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 PRRG1O14668 218 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 HIP1RO75146 1068 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 ABCC6O95255 1503 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 STRNO43815 780 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 COBLO75128 1261 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 RALAP11233 206 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 TMEM62Q0P6H9 643 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 NOGQ13253 232 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 GMCL1Q96IK5 515 aa11.56□□□□□ -0.56
PTCH1-206ENST00000421141 SPATC1LQ9H0A9 340 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms