RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 METAP2P50579 478 aaKnown RBP eCLIP19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 KRT17Q04695 432 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 PRR16Q569H4 304 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 SYCE2Q6PIF2 218 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 ECHDC2Q86YB7 292 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 ABI1Q8IZP0 508 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 LRRC43Q8N309 656 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 LINC01465Q8N7H1 131 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 ZNF558Q96NG5 402 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 TCF25Q9BQ70 676 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 ENTPD7Q9NQZ7 604 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 SAMM50Q9Y512 469 aa19.08■□□□□ 0.64
UPF3AP3-201ENST00000420996 HIDE1A8MVS5 230 aa19.07■□□□□ 0.64
UPF3AP3-201ENST00000420996 PRPF3O43395 683 aaKnown RBP19.07■□□□□ 0.64
UPF3AP3-201ENST00000420996 FGD1P98174 961 aa19.07■□□□□ 0.64
UPF3AP3-201ENST00000420996 LENG9Q96B70 501 aa19.07■□□□□ 0.64
UPF3AP3-201ENST00000420996 NRBP2Q9NSY0 501 aa19.07■□□□□ 0.64
UPF3AP3-201ENST00000420996 SPG21Q9NZD8 308 aa19.07■□□□□ 0.64
UPF3AP3-201ENST00000420996 WDR64B1ANS9 1081 aa19.06■□□□□ 0.64
UPF3AP3-201ENST00000420996 PTPN21Q16825 1174 aa19.06■□□□□ 0.64
UPF3AP3-201ENST00000420996 TMC7Q7Z402 723 aa19.06■□□□□ 0.64
UPF3AP3-201ENST00000420996 LRRC71Q8N4P6 559 aa19.06■□□□□ 0.64
UPF3AP3-201ENST00000420996 BICD2Q8TD16 824 aa19.06■□□□□ 0.64
UPF3AP3-201ENST00000420996 ASIC4Q96FT7 647 aa19.06■□□□□ 0.64
UPF3AP3-201ENST00000420996 PHOX2BQ99453 314 aa19.06■□□□□ 0.64
UPF3AP3-201ENST00000420996 ZNF862O60290 1169 aa19.05■□□□□ 0.64
UPF3AP3-201ENST00000420996 EOMESO95936 686 aa19.05■□□□□ 0.64
UPF3AP3-201ENST00000420996 OATP04181 439 aa19.05■□□□□ 0.64
UPF3AP3-201ENST00000420996 PBX3P40426 434 aa19.05■□□□□ 0.64
UPF3AP3-201ENST00000420996 LLGL2Q6P1M3 1020 aa19.05■□□□□ 0.64
UPF3AP3-201ENST00000420996 CASP10Q92851 521 aa19.05■□□□□ 0.64
UPF3AP3-201ENST00000420996 APOL5Q9BWW9 433 aa19.05■□□□□ 0.64
UPF3AP3-201ENST00000420996 DISC1Q9NRI5 854 aa19.05■□□□□ 0.64
UPF3AP3-201ENST00000420996 NID2Q14112 1375 aa19.05■□□□□ 0.64
UPF3AP3-201ENST00000420996 A0A0U1RQF3 1178 aa19.04■□□□□ 0.64
UPF3AP3-201ENST00000420996 DARSP14868 501 aaKnown RBP19.04■□□□□ 0.64
UPF3AP3-201ENST00000420996 GPC3P51654 580 aa19.04■□□□□ 0.64
UPF3AP3-201ENST00000420996 PRKCEQ02156 737 aa19.04■□□□□ 0.64
UPF3AP3-201ENST00000420996 TCF15Q12870 199 aa19.04■□□□□ 0.64
UPF3AP3-201ENST00000420996 TPRNQ4KMQ1 711 aa19.04■□□□□ 0.64
UPF3AP3-201ENST00000420996 CLLU1OSQ5K130 101 aa19.04■□□□□ 0.64
UPF3AP3-201ENST00000420996 Q6ZUG5 572 aa19.04■□□□□ 0.64
UPF3AP3-201ENST00000420996 ZNF598Q86UK7 904 aaKnown RBP19.04■□□□□ 0.64
UPF3AP3-201ENST00000420996 MRPL43Q8N983 215 aaKnown RBP19.04■□□□□ 0.64
UPF3AP3-201ENST00000420996 RNF169Q8NCN4 708 aa19.04■□□□□ 0.64
UPF3AP3-201ENST00000420996 RIT2Q99578 217 aa19.04■□□□□ 0.64
UPF3AP3-201ENST00000420996 MSH4O15457 936 aa19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 EDIL3O43854 480 aa19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 CPA1P15085 419 aa19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 SFNP31947 248 aa19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 USP11P51784 963 aa19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 AKAP17AQ02040 695 aaKnown RBP19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 SMC1AQ14683 1233 aaKnown RBP19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 SLC39A11Q8N1S5 342 aa19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 KCNB2Q92953 911 aa19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 BRF1Q92994 677 aa19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 ZNF668Q96K58 619 aaPredicted RBP19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 SCLT1Q96NL6 688 aa19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 DACT1Q9NYF0 836 aa19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 NR2E1Q9Y466 385 aa19.03■□□□□ 0.64
UPF3AP3-201ENST00000420996 C2orf71A6NGG8 1288 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 AVPR2P30518 371 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 VCPP55072 806 aaKnown RBP19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 ITIH3Q06033 890 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 TBC1D8BQ0IIM8 1120 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 TARBP2Q15633 366 aaKnown RBP19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 CES5AQ6NT32 575 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 ZBTB33Q86T24 672 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 FBXL16Q8N461 479 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 CCDC148Q8NFR7 591 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 HELQQ8TDG4 1101 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 SLC5A5Q92911 643 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 PHKBQ93100 1093 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 CCDC136Q96JN2 1154 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 NECTIN4Q96NY8 510 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 MRPL9Q9BYD2 267 aaKnown RBP19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 ADAM7Q9H2U9 754 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 HCFC2Q9Y5Z7 792 aa19.02■□□□□ 0.64
UPF3AP3-201ENST00000420996 ZDBF2Q9HCK1 2354 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 MYO10Q9HD67 2058 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 GAS7O60861 476 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 CDC45O75419 566 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 FGFR4P22455 802 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 ALDH7A1P49419 539 aaKnown RBP19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 JAK3P52333 1124 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 CDC42EP1Q00587 391 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 BMS1Q14692 1282 aaKnown RBP19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 NTRK3Q16288 839 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 UGCGQ16739 394 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 BLOC1S2Q6QNY1 142 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 SKAP1Q86WV1 359 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 NLRP7Q8WX94 980 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 JAKMIP1Q96N16 626 aaKnown RBP19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 TEKT3Q9BXF9 490 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 RNF26Q9BY78 433 aaPredicted RBP19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 IRF2BPLQ9H1B7 796 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 CHST12Q9NRB3 414 aa19.01■□□□□ 0.63
UPF3AP3-201ENST00000420996 CLASP2O75122 1294 aaKnown RBP19■□□□□ 0.63
UPF3AP3-201ENST00000420996 CXCL14O95715 111 aa19■□□□□ 0.63
UPF3AP3-201ENST00000420996 SP100P23497 879 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms