RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 TET1Q8NFU7 2136 aa20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 IGKV6-21A0A0C4DH24 114 aa20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 STX6O43752 255 aa20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 AMHP03971 560 aa20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 VTNP04004 478 aa20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 XRCC6P12956 609 aaKnown RBP eCLIP20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 PDIA4P13667 645 aaKnown RBP20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 RFC5P40937 340 aa20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 CRYBB1P53674 252 aaPredicted RBP20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 NPEPPSP55786 919 aa20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 XKR9Q5GH70 373 aa20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 ODR4Q5SWX8 454 aa20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 HAUS3Q68CZ6 603 aa20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 FAM43BQ6ZT52 329 aaPredicted RBP20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 CCDC43Q96MW1 224 aaKnown RBP20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 OSBPL7Q9BZF2 842 aa20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 ANKEF1Q9NU02 776 aa20.32■□□□□ 0.84
ECHDC3-202ENST00000420401 BMP15O95972 392 aa20.31■□□□□ 0.84
ECHDC3-202ENST00000420401 SPATA31C1P0DKV0 1188 aa20.31■□□□□ 0.84
ECHDC3-202ENST00000420401 RPA1P27694 616 aa20.31■□□□□ 0.84
ECHDC3-202ENST00000420401 POLGP54098 1239 aaPredicted RBP20.31■□□□□ 0.84
ECHDC3-202ENST00000420401 ATP2C1P98194 919 aaPredicted RBP20.31■□□□□ 0.84
ECHDC3-202ENST00000420401 PAK2Q13177 524 aa20.31■□□□□ 0.84
ECHDC3-202ENST00000420401 GRB10Q13322 594 aa20.31■□□□□ 0.84
ECHDC3-202ENST00000420401 KIZQ2M2Z5 673 aa20.31■□□□□ 0.84
ECHDC3-202ENST00000420401 CATSPER3Q86XQ3 398 aa20.31■□□□□ 0.84
ECHDC3-202ENST00000420401 NACC1Q96RE7 527 aa20.31■□□□□ 0.84
ECHDC3-202ENST00000420401 WDR81Q562E7 1941 aa20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 ZBTB39O15060 712 aa20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 GPR32O75388 356 aa20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 MUTP22033 750 aa20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 NLRP11P59045 1033 aaKnown RBP20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 ARL6IP4Q66PJ3 421 aaKnown RBP20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 IGSF22Q8N9C0 903 aa20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 ZNF579Q8NAF0 562 aaKnown RBP20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 PPP1R16BQ96T49 567 aa20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 ZBED2Q9BTP6 218 aa20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 FTHL17Q9BXU8 183 aa20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 ZSCAN16Q9H4T2 348 aaPredicted RBP20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 DHX33Q9H6R0 707 aaKnown RBP20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 AGO3Q9H9G7 860 aaKnown RBP20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 SUCLA2Q9P2R7 463 aaPredicted RBP20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 MTMR6Q9Y217 621 aa20.3■□□□□ 0.84
ECHDC3-202ENST00000420401 PTPRSQ13332 1948 aa20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 COL4A4P53420 1690 aaPredicted RBP20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 GAS2O43903 313 aaKnown RBP20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 MED24O75448 989 aa20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 RPS6KA5O75582 802 aa20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 CD52P31358 61 aa20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 CCT6AP40227 531 aaKnown RBP20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 MKRN4PQ13434 485 aaPredicted RBP20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 KRT79Q5XKE5 535 aa20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 TCP11Q8WWU5 503 aa20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 SCLT1Q96NL6 688 aa20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 OSMRQ99650 979 aa20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 ADAMTS10Q9H324 1103 aa20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 CDHR5Q9HBB8 845 aa20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 PADI3Q9ULW8 664 aa20.29■□□□□ 0.84
ECHDC3-202ENST00000420401 GPR182O15218 404 aa20.28■□□□□ 0.84
ECHDC3-202ENST00000420401 GPR37L1O60883 481 aa20.28■□□□□ 0.84
ECHDC3-202ENST00000420401 ARHGEF15O94989 841 aa20.28■□□□□ 0.84
ECHDC3-202ENST00000420401 GPC3P51654 580 aa20.28■□□□□ 0.84
ECHDC3-202ENST00000420401 DEFB103AP81534 67 aa20.28■□□□□ 0.84
ECHDC3-202ENST00000420401 NFX1Q12986 1120 aaKnown RBP20.28■□□□□ 0.84
ECHDC3-202ENST00000420401 RESTQ13127 1097 aa20.28■□□□□ 0.84
ECHDC3-202ENST00000420401 IL17AQ16552 155 aa20.28■□□□□ 0.84
ECHDC3-202ENST00000420401 PIGOQ8TEQ8 1089 aa20.28■□□□□ 0.84
ECHDC3-202ENST00000420401 NLRP7Q8WX94 980 aa20.28■□□□□ 0.84
ECHDC3-202ENST00000420401 DBR1Q9UK59 544 aaKnown RBP20.28■□□□□ 0.84
ECHDC3-202ENST00000420401 NOC2LQ9Y3T9 749 aaKnown RBP20.28■□□□□ 0.84
ECHDC3-202ENST00000420401 BRWD1Q9NSI6 2320 aa20.28■□□□□ 0.84
ECHDC3-202ENST00000420401 FAM86C2PA6NEL3 165 aa20.27■□□□□ 0.84
ECHDC3-202ENST00000420401 DGAT1O75907 488 aa20.27■□□□□ 0.84
ECHDC3-202ENST00000420401 DRP2Q13474 957 aa20.27■□□□□ 0.84
ECHDC3-202ENST00000420401 EMC2Q15006 297 aa20.27■□□□□ 0.84
ECHDC3-202ENST00000420401 RHPN2Q8IUC4 686 aa20.27■□□□□ 0.84
ECHDC3-202ENST00000420401 MYOCDQ8IZQ8 938 aa20.27■□□□□ 0.84
ECHDC3-202ENST00000420401 SNX29Q8TEQ0 813 aa20.27■□□□□ 0.84
ECHDC3-202ENST00000420401 MTRQ99707 1265 aa20.27■□□□□ 0.84
ECHDC3-202ENST00000420401 ST3GAL5Q9UNP4 418 aa20.27■□□□□ 0.84
ECHDC3-202ENST00000420401 A0A087WWV3 80 aa20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 VWA3AA6NCI4 1184 aa20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 ENPP3O14638 875 aa20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 GJB5O95377 273 aa20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 EIF4BP23588 611 aaKnown RBP20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 RARRES1P49788 294 aa20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 SF3A1Q15459 793 aaKnown RBP20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 POTEGQ6S5H5 508 aa20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 ZNF410Q86VK4 478 aa20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 SPRYD3Q8NCJ5 442 aa20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 TMEM40Q8WWA1 233 aa20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 PSPC1Q8WXF1 523 aaKnown RBP20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 TMEM143Q96AN5 459 aa20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 GCOM2Q9BZD3 368 aaPredicted RBP20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 ATP6V0A4Q9HBG4 840 aa20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 ERVK-5Q9HDB9 667 aa20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 LMCD1Q9NZU5 365 aa20.26■□□□□ 0.83
ECHDC3-202ENST00000420401 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.25■□□□□ 0.83
ECHDC3-202ENST00000420401 ASAP2O43150 1006 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms