RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 TMEM67Q5HYA8 995 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 ERICH6BQ5W0A0 696 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 NSMFQ6X4W1 530 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 ARMCX2Q7L311 632 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 ADGRF4Q8IZF3 695 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 CLEC4DQ8WXI8 215 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 SLC7A3Q8WY07 619 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 RSRP1Q9BUV0 290 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 ACBD3Q9H3P7 528 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 SRA1Q9HD15 236 aaKnown RBP8.04□□□□□ -1.12
HMGN1-205ENST00000419378 PRDM6Q9NQX0 595 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 ZHX1Q9UKY1 873 aaPredicted RBP8.04□□□□□ -1.12
HMGN1-205ENST00000419378 PNMA2Q9UL42 364 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 ASTN1O14525 1302 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 H0YGN5 161 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 PRC1O43663 620 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 RARBP10826 455 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 GBP2P32456 591 aaPredicted RBP8.03□□□□□ -1.12
HMGN1-205ENST00000419378 LIG3P49916 1009 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 TROAPQ12815 778 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 ACVR2BQ13705 512 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 BAATQ14032 418 aaPredicted RBP8.03□□□□□ -1.12
HMGN1-205ENST00000419378 COL9A3Q14050 684 aaPredicted RBP8.03□□□□□ -1.12
HMGN1-205ENST00000419378 GRM4Q14833 912 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 QRICH1Q2TAL8 776 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 USH1GQ495M9 461 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 GJC2Q5T442 439 aaPredicted RBP8.03□□□□□ -1.12
HMGN1-205ENST00000419378 SLC30A10Q6XR72 485 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 RNF207Q6ZRF8 634 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 RELL1Q8IUW5 271 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 DMRTC2Q8IXT2 367 aaPredicted RBP8.03□□□□□ -1.12
HMGN1-205ENST00000419378 CCDC144CPQ8IYA2 1237 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 ZNF654Q8IZM8 581 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 SVOPQ8N4V2 548 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 IGDCC4Q8TDY8 1250 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 LENG1Q96BZ8 264 aaPredicted RBP8.03□□□□□ -1.12
HMGN1-205ENST00000419378 KATNBL1Q9H079 304 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 ABHD16BQ9H3Z7 469 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 JMJD4Q9H9V9 463 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 LY9Q9HBG7 655 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 XPNPEP3Q9NQH7 507 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 MAD2L2Q9UI95 211 aa8.03□□□□□ -1.12
HMGN1-205ENST00000419378 DDX49Q9Y6V7 483 aaKnown RBP8.03□□□□□ -1.12
HMGN1-205ENST00000419378 MYH6P13533 1939 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 PTPDC1A2A3K4 754 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 ASB14A6NK59 587 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 KLRF2D3W0D1 207 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 SH2B2O14492 632 aaPredicted RBP8.02□□□□□ -1.13
HMGN1-205ENST00000419378 DDAH1O94760 285 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 PGK1P00558 417 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 NID1P14543 1247 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 HOXB4P17483 251 aaPredicted RBP8.02□□□□□ -1.13
HMGN1-205ENST00000419378 CALML3P27482 149 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 MCM5P33992 734 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 DGKGP49619 791 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 ALDH5A1P51649 535 aaPredicted RBP8.02□□□□□ -1.13
HMGN1-205ENST00000419378 PWP1Q13610 501 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 LRRC41Q15345 812 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 SLC35G1Q2M3R5 365 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 PCNX4Q63HM2 1172 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 FAM117BQ6P1L5 589 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 CATIPQ7Z7H3 387 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 ARRDC4Q8NCT1 418 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 PHC3Q8NDX5 983 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 TMEM74Q96NL1 305 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 MTA3Q9BTC8 594 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 VAT1LQ9HCJ6 419 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 FAM184BQ9ULE4 1060 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 TLR6Q9Y2C9 796 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 NR2E3Q9Y5X4 410 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 ABCB11O95342 1321 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 SYNRGQ9UMZ2 1314 aa8.02□□□□□ -1.13
HMGN1-205ENST00000419378 KBTBD13C9JR72 458 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 ZBTB5O15062 677 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 ADCY6O43306 1168 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 PPP1R11O60927 126 aaPredicted RBP8.01□□□□□ -1.13
HMGN1-205ENST00000419378 ADAMTS4O75173 837 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 RPS6P62753 249 aaKnown RBP8.01□□□□□ -1.13
HMGN1-205ENST00000419378 GSTM4Q03013 218 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 LRRC26Q2I0M4 334 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 CCDC144BQ3MJ40 725 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 NAALADL2Q58DX5 795 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 NFXL1Q6ZNB6 911 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 FBXO11Q86XK2 927 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 FBXO16Q8IX29 292 aaPredicted RBP8.01□□□□□ -1.13
HMGN1-205ENST00000419378 C7orf61Q8IZ16 206 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 STK35Q8TDR2 534 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 MORC4Q8TE76 937 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 NUP133Q8WUM0 1156 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 MTMR8Q96EF0 704 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 TMEM87BQ96K49 555 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 MYL10Q9BUA6 226 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 AMNQ9BXJ7 453 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 SENP6Q9GZR1 1112 aaPredicted RBP8.01□□□□□ -1.13
HMGN1-205ENST00000419378 ENAMQ9NRM1 1142 aa8.01□□□□□ -1.13
HMGN1-205ENST00000419378 ADD3Q9UEY8 706 aaKnown RBP8.01□□□□□ -1.13
HMGN1-205ENST00000419378 LAMA2P24043 3122 aaKnown RBP8□□□□□ -1.13
HMGN1-205ENST00000419378 TRIOBPQ9H2D6 2365 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 LOC102724159A0A0B4J2E5 919 aa8□□□□□ -1.13
HMGN1-205ENST00000419378 MYADML2A6NDP7 307 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms