RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PI4K2BG5E9Z4 385 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 ACSL3O95573 720 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 IFT88Q13099 833 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 TMEM259Q4ZIN3 620 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 RNF146Q9NTX7 359 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 STRIP2Q9ULQ0 834 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 RNF123Q5XPI4 1314 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 SMARCA1P28370 1054 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 PKP1Q13835 747 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 CRLF3Q8IUI8 442 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 EXOC4Q96A65 974 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 NRBF2Q96F24 287 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 NDFIP2Q9NV92 336 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 THEGQ9P2T0 379 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 ZCCHC11Q5TAX3 1644 aaKnown RBP11.98□□□□□ -0.49
PTCH1-205ENST00000418258 METP08581 1390 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 SOWAHDA6NJG2 315 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 RPS6KA4O75676 772 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 HSPA4LO95757 839 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 SLFN14P0C7P3 912 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 ETF1P62495 437 aaKnown RBP11.98□□□□□ -0.49
PTCH1-205ENST00000418258 SLC7A5Q01650 507 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 THEMIS2Q5TEJ8 643 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 TBC1D22BQ9NU19 505 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 TTC8Q8TAM2 541 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 TRAIPQ9BWF2 469 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 MINPP1Q9UNW1 487 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 TNPO2O14787 897 aaKnown RBP11.98□□□□□ -0.49
PTCH1-205ENST00000418258 EN1Q05925 392 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-205ENST00000418258 DHX9Q08211 1270 aaKnown RBP11.98□□□□□ -0.49
PTCH1-205ENST00000418258 PAGE5Q96GU1 130 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 GABBR1Q9UBS5 961 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 TJP2Q9UDY2 1190 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 GOLGA8MH3BSY2 632 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 GPT2Q8TD30 523 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 SPON2Q9BUD6 331 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 UPF3AQ9H1J1 476 aaKnown RBP11.98□□□□□ -0.49
PTCH1-205ENST00000418258 PIH1D3Q9NQM4 214 aaKnown RBP11.98□□□□□ -0.49
PTCH1-205ENST00000418258 COL15A1P39059 1388 aa11.98□□□□□ -0.49
PTCH1-205ENST00000418258 MCAMP43121 646 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 EPHB4P54760 987 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 CACNB2Q08289 660 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-205ENST00000418258 PADI6Q6TGC4 694 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 RASEFQ8IZ41 740 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 KIF28PB7ZC32 967 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 DFFAO00273 331 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 SLC16A4O15374 487 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 RWDD2BP57060 319 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 RBBP7Q16576 425 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 RASIP1Q5U651 963 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 CEP19Q96LK0 163 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 EGFL8Q99944 293 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 NDST4Q9H3R1 872 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 RPAP3Q9H6T3 665 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-205ENST00000418258 DOLKQ9UPQ8 538 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 ERBB3P21860 1342 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 IPO5O00410 1097 aaKnown RBP11.97□□□□□ -0.49
PTCH1-205ENST00000418258 RALAP11233 206 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 RAB42Q8N4Z0 105 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 TEKT4Q8WW24 435 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 KIF12Q96FN5 646 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 CEP95Q96GE4 821 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 MRFAP1L1Q96HT8 127 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 ZMYND12Q9H0C1 365 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 GTSE1Q9NYZ3 720 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 USP17L15C9J2P7 530 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 USP17L13C9JLJ4 530 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 USP17L11C9JVI0 530 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 USP17L18D6R9N7 530 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 USP17L22D6RA61 530 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 USP17L17D6RBQ6 530 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 USP17L19D6RCP7 530 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 USP17L20D6RJB6 530 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 SLC8A1P32418 973 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 USP17L24Q0WX57 530 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 USP17L6PQ6QN14 398 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 SIK2Q9H0K1 926 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 SAMSN1Q9NSI8 373 aaKnown RBP11.97□□□□□ -0.49
PTCH1-205ENST00000418258 CDC23Q9UJX2 597 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 M0QYV0 167 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 ALDH1A1P00352 501 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 ADORA2BP29275 332 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 CDC25BP30305 580 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 SNCBQ16143 134 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 STAP2Q9UGK3 403 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 L3MBTL1Q9Y468 752 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 ZC3H4Q9UPT8 1303 aaKnown RBP11.97□□□□□ -0.49
PTCH1-205ENST00000418258 UPP2O95045 317 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 CALB1P05937 261 aa11.97□□□□□ -0.49
PTCH1-205ENST00000418258 KIF23Q02241 960 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-205ENST00000418258 GABPB1Q06547 395 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-205ENST00000418258 DDX50Q9BQ39 737 aaKnown RBP11.97□□□□□ -0.49
PTCH1-205ENST00000418258 TRIM45Q9H8W5 580 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-205ENST00000418258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.96□□□□□ -0.49
PTCH1-205ENST00000418258 CTNND1O60716 968 aaKnown RBP11.96□□□□□ -0.49
PTCH1-205ENST00000418258 MOCS2O96007 188 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-205ENST00000418258 CYP2D6P10635 497 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 IFNAR1P17181 557 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 LBRQ14739 615 aaKnown RBP11.96□□□□□ -0.49
PTCH1-205ENST00000418258 RNF135Q8IUD6 432 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms