RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 H0YHG0 523 aa12.71□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 PIK3CDO00329 1044 aa12.71□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 DDX3XO00571 662 aaKnown RBP eCLIP12.71□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 LRRN2O75325 713 aa12.71□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 CORO7P57737 925 aa12.71□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 TRMT1LQ7Z2T5 733 aaKnown RBP12.71□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 FLAD1Q8NFF5 587 aa12.71□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 HERC5Q9UII4 1024 aaKnown RBP12.71□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 K7ENM7 598 aa12.71□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TGFB1I1O43294 461 aa12.71□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CLSTN1O94985 981 aa12.71□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 FGGP02679 453 aa12.71□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ECE1P42892 770 aa12.71□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 AOC3Q16853 763 aa12.71□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 NAA35Q5VZE5 725 aa12.71□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 COL23A1Q86Y22 540 aaPredicted RBP12.71□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 MREGQ8N565 214 aa12.71□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 RFFLQ8WZ73 363 aa12.71□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ATP6V1G3Q96LB4 118 aa12.71□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CLRN2A0PK11 232 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 FKBP1AP62942 108 aaKnown RBP12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 BTNL9Q6UXG8 535 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SLITRK6Q9H5Y7 841 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 VEZTQ9HBM0 779 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ODF2LQ9ULJ1 636 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ZNF233A6NK53 670 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 F8VZ95 297 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ZBTB39O15060 712 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PPIP5K2O43314 1243 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 MMP14P50281 582 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ERVK-9P63128 1117 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SETQ01105 290 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PPP2R5AQ15172 486 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 C1orf186Q6ZWK4 172 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ZNF720Q7Z2F6 126 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 LRRC57Q8N9N7 239 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SLC35G2Q8TBE7 412 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 HOOK2Q96ED9 719 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PRMT6Q96LA8 375 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 LXNQ9BS40 222 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 INTS2Q9H0H0 1204 aaKnown RBP12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 RAB17Q9H0T7 212 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 DPH5Q9H2P9 285 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 BCAS3Q9H6U6 928 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 AGPAT3Q9NRZ7 376 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 KCND2Q9NZV8 630 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 APEX2Q9UBZ4 518 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 FAM169AQ9Y6X4 670 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TAF1LQ8IZX4 1826 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 A0A1W2PRG0 241 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 IPO5O00410 1097 aaKnown RBP12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SKOR1P84550 965 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TRADDQ15628 312 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PPP2R5EQ16537 467 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 MIER3Q7Z3K6 550 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ADAT2Q7Z6V5 191 aaKnown RBP12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CTTNBP2NLQ9P2B4 639 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ZBTB21Q9ULJ3 1066 aa12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CTDP1Q9Y5B0 961 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 A0A087WUV0 522 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 NPEPPSP55786 919 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 COG2Q14746 738 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PROCA1Q8NCQ7 364 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 BANK1Q8NDB2 785 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 WDR18Q9BV38 432 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 FAM114A2Q9NRY5 505 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 UBE4BO95155 1302 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 DAPK3O43293 454 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 BUB1BO60566 1050 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 JAM2P57087 298 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 GUCY1A3Q02108 690 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PPP2R5CQ13362 524 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SLC15A2Q16348 729 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 OTUD6BQ8N6M0 293 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 EIF1ADQ8N9N8 165 aaKnown RBP12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ACER1Q8TDN7 264 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SCFD2Q8WU76 684 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CNKSR1Q969H4 720 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 IKZF4Q9H2S9 585 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 IGLV3-22A0A075B6J6 115 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PSMD10O75832 226 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TMEM253P0C7T8 217 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 INPP5BP32019 993 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 HSPA9P38646 679 aaKnown RBP12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 DLGAP5Q15398 846 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CLUL1Q15846 466 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 KDM7AQ6ZMT4 941 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TEX2Q8IWB9 1127 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 RNPC3Q96LT9 517 aaKnown RBP12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CEP89Q96ST8 783 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SIX2Q9NPC8 291 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 OSGEPQ9NPF4 335 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 RASAL2Q9UJF2 1139 aa12.69□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 MYH4Q9Y623 1939 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SLC20A2Q08357 652 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 BFSP1Q12934 665 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 NT5DC3Q86UY8 548 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms