RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ZNF710Q8N1W2 664 aa16.73■□□□□ 0.27
RPS28-201ENST00000417088 VN1R2Q8NFZ6 395 aa16.73■□□□□ 0.27
RPS28-201ENST00000417088 GJA10Q969M2 543 aa16.73■□□□□ 0.27
RPS28-201ENST00000417088 CASD1Q96PB1 797 aa16.73■□□□□ 0.27
RPS28-201ENST00000417088 TEKT3Q9BXF9 490 aa16.73■□□□□ 0.27
RPS28-201ENST00000417088 TRIOO75962 3097 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 LOC730098B7Z3J9 87 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 HOXA2O43364 376 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 CHMP2AO43633 222 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 REC8O95072 547 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 DARSP14868 501 aaKnown RBP16.72■□□□□ 0.27
RPS28-201ENST00000417088 ZSCAN20P17040 1043 aaPredicted RBP16.72■□□□□ 0.27
RPS28-201ENST00000417088 SFNP31947 248 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 GPC3P51654 580 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 JAK3P52333 1124 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 PLCB3Q01970 1234 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 TOB2Q14106 344 aaPredicted RBP16.72■□□□□ 0.27
RPS28-201ENST00000417088 TARBP2Q15633 366 aaKnown RBP16.72■□□□□ 0.27
RPS28-201ENST00000417088 LRCH2Q5VUJ6 765 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 PDE12Q6L8Q7 609 aaKnown RBP16.72■□□□□ 0.27
RPS28-201ENST00000417088 ECHDC2Q86YB7 292 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 TBCKQ8TEA7 893 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 MRPS27Q92552 414 aaKnown RBP16.72■□□□□ 0.27
RPS28-201ENST00000417088 CDCA3Q99618 268 aaPredicted RBP16.72■□□□□ 0.27
RPS28-201ENST00000417088 LZTS1Q9Y250 596 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 TECTAO75443 2155 aa16.72■□□□□ 0.27
RPS28-201ENST00000417088 WDR81Q562E7 1941 aa16.71■□□□□ 0.27
RPS28-201ENST00000417088 PSMD10O75832 226 aa16.71■□□□□ 0.27
RPS28-201ENST00000417088 FGFR4P22455 802 aa16.71■□□□□ 0.27
RPS28-201ENST00000417088 CBX2Q14781 532 aaPredicted RBP16.71■□□□□ 0.27
RPS28-201ENST00000417088 Q4G0T1 1027 aa16.71■□□□□ 0.27
RPS28-201ENST00000417088 KCNT2Q6UVM3 1135 aa16.71■□□□□ 0.27
RPS28-201ENST00000417088 RUFY3Q7L099 469 aa16.71■□□□□ 0.27
RPS28-201ENST00000417088 EDAQ92838 391 aa16.71■□□□□ 0.27
RPS28-201ENST00000417088 ZSWIM6Q9HCJ5 1215 aa16.71■□□□□ 0.27
RPS28-201ENST00000417088 PUF60Q9UHX1 559 aaKnown RBP16.71■□□□□ 0.27
RPS28-201ENST00000417088 PCDHA4Q9UN74 947 aa16.71■□□□□ 0.27
RPS28-201ENST00000417088 ZNF318Q5VUA4 2279 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 FSD2A1L4K1 749 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 STBD1O95210 358 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 TDP2O95551 362 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 PBX3P40426 434 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 SSRP1Q08945 709 aaKnown RBP16.7■□□□□ 0.26
RPS28-201ENST00000417088 TBC1D8BQ0IIM8 1120 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 DRP2Q13474 957 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 KCNC3Q14003 757 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 CLLU1OSQ5K130 101 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 PLPP4Q5VZY2 271 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 B3GNT9Q6UX72 402 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 MIER3Q7Z3K6 550 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 TRIM22Q8IYM9 498 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 ABI1Q8IZP0 508 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 LRRC43Q8N309 656 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 RNF169Q8NCN4 708 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 RDM1Q8NG50 284 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 SUSD6Q92537 303 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 ZNF558Q96NG5 402 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 CEP89Q96ST8 783 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 PHF7Q9BWX1 381 aaPredicted RBP16.7■□□□□ 0.26
RPS28-201ENST00000417088 C22orf23Q9BZE7 217 aa16.7■□□□□ 0.26
RPS28-201ENST00000417088 CYP3A7-CYP3A51PA0A087WV96 503 aa16.69■□□□□ 0.26
RPS28-201ENST00000417088 A0A0U1RQF3 1178 aa16.69■□□□□ 0.26
RPS28-201ENST00000417088 M0R2N6 131 aa16.69■□□□□ 0.26
RPS28-201ENST00000417088 CYP3A7P24462 503 aa16.69■□□□□ 0.26
RPS28-201ENST00000417088 XKR3Q5GH77 459 aa16.69■□□□□ 0.26
RPS28-201ENST00000417088 TMEM184AQ6ZMB5 413 aa16.69■□□□□ 0.26
RPS28-201ENST00000417088 ZNF598Q86UK7 904 aaKnown RBP16.69■□□□□ 0.26
RPS28-201ENST00000417088 BLIDQ8IZY5 108 aa16.69■□□□□ 0.26
RPS28-201ENST00000417088 NLRP7Q8WX94 980 aa16.69■□□□□ 0.26
RPS28-201ENST00000417088 FBXL18Q96ME1 805 aa16.69■□□□□ 0.26
RPS28-201ENST00000417088 SCLT1Q96NL6 688 aa16.69■□□□□ 0.26
RPS28-201ENST00000417088 TCF25Q9BQ70 676 aa16.69■□□□□ 0.26
RPS28-201ENST00000417088 NIFKQ9BYG3 293 aaKnown RBP16.69■□□□□ 0.26
RPS28-201ENST00000417088 TMEM150BA6NC51 233 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 HIDE1A8MVS5 230 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 CSDE1O75534 798 aaKnown RBP16.68■□□□□ 0.26
RPS28-201ENST00000417088 DEXIO95424 95 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 EOMESO95936 686 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 ATF7P17544 494 aaPredicted RBP16.68■□□□□ 0.26
RPS28-201ENST00000417088 PPM1AP35813 382 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 KRT17Q04695 432 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 NPY5RQ15761 445 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 MTERF2Q49AM1 385 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 DAGLBQ8NCG7 672 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 ETNPPLQ8TBG4 499 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 ZNF274Q96GC6 653 aaPredicted RBP16.68■□□□□ 0.26
RPS28-201ENST00000417088 RPGRIP1Q96KN7 1286 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 MFSD14AQ96MC6 490 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 MBOAT7Q96N66 472 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 SH2D3AQ9BRG2 576 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 LARP6Q9BRS8 491 aaKnown RBP16.68■□□□□ 0.26
RPS28-201ENST00000417088 S1PR5Q9H228 398 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 KCNH6Q9H252 994 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 NGRNQ9NPE2 291 aaKnown RBP16.68■□□□□ 0.26
RPS28-201ENST00000417088 ENTPD7Q9NQZ7 604 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 SPG21Q9NZD8 308 aa16.68■□□□□ 0.26
RPS28-201ENST00000417088 SEPT9Q9UHD8 586 aaPredicted RBP16.68■□□□□ 0.26
RPS28-201ENST00000417088 IGKV6-21A0A0C4DH24 114 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 CPLX1O14810 134 aa16.67■□□□□ 0.26
RPS28-201ENST00000417088 EPB41L2O43491 1005 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms