RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 MDH1P40925 334 aaKnown RBP12.88□□□□□ -0.35
UBR4-205ENST00000417040 COASYQ13057 564 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 MIS18BP1Q6P0N0 1132 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 RASSF3Q86WH2 238 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 CATSPER3Q86XQ3 398 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 TRIM51Q9BSJ1 452 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 MED7O43513 233 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 ARL4CP56559 192 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 KDSRQ06136 332 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 CDC37Q16543 378 aaPredicted RBP12.87□□□□□ -0.35
UBR4-205ENST00000417040 RWDD4Q6NW29 188 aaKnown RBP12.87□□□□□ -0.35
UBR4-205ENST00000417040 TMEM154Q6P9G4 183 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 TRIM15Q9C019 465 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 ING2Q9H160 280 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 ATP2B4P23634 1241 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 CCDC137Q6PK04 289 aaKnown RBP12.87□□□□□ -0.35
UBR4-205ENST00000417040 WDR75Q8IWA0 830 aaKnown RBP12.87□□□□□ -0.35
UBR4-205ENST00000417040 ZNF564Q8TBZ8 553 aaPredicted RBP12.87□□□□□ -0.35
UBR4-205ENST00000417040 PMS1P54277 932 aaKnown RBP12.87□□□□□ -0.35
UBR4-205ENST00000417040 GPC5P78333 572 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 OCA2Q04671 838 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 CUL3Q13618 768 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 RAD54LQ92698 747 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 E2F6O75461 281 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 ARHGDIAP52565 204 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 SYDE2Q5VT97 1194 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 PCSK1NQ9UHG2 260 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 HPCAL4Q9UM19 191 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 SYNGAP1Q96PV0 1343 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 USP17L5A8MUK1 530 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 FOSP01100 380 aaPredicted RBP12.87□□□□□ -0.35
UBR4-205ENST00000417040 SOX11P35716 441 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.353e-7■■■□□ 15.8
UBR4-205ENST00000417040 DYNC1I2Q13409 638 aaKnown RBP12.87□□□□□ -0.35
UBR4-205ENST00000417040 RASGRF1Q13972 1273 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 UNC13DQ70J99 1090 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 RHOT2Q8IXI1 618 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 PIK3R5Q8WYR1 880 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 ANKRD7Q92527 254 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 L3MBTL1Q9Y468 752 aa12.87□□□□□ -0.35
UBR4-205ENST00000417040 MEFVO15553 781 aaPredicted RBP12.86□□□□□ -0.35
UBR4-205ENST00000417040 ATP5HO75947 161 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 HADHAP40939 763 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 MIGA2Q7L4E1 593 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 SPATA4Q8NEY3 305 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 ZNF507Q8TCN5 953 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 PALMDQ9NP74 551 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 NPHS2Q9NP85 383 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 GPR108Q9NPR9 543 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 SNAP23O00161 211 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 SEMA3EO15041 775 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
UBR4-205ENST00000417040 PCYT1AP49585 367 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 EAPPQ56P03 285 aaPredicted RBP12.86□□□□□ -0.35
UBR4-205ENST00000417040 KIF2CQ99661 725 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 ERVK-7P63135 1459 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 NR3C1P04150 777 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 KLK7P49862 253 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 KCNA1Q09470 495 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 RNF135Q8IUD6 432 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 SH3GL3Q99963 347 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 MSTO1Q9BUK6 570 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 DBNDD1Q9H9R9 158 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 NGRNQ9NPE2 291 aaKnown RBP12.86□□□□□ -0.35
UBR4-205ENST00000417040 FTLP02792 175 aaPredicted RBP12.86□□□□□ -0.35
UBR4-205ENST00000417040 UBTFL6P0CB48 400 aaPredicted RBP12.86□□□□□ -0.35
UBR4-205ENST00000417040 PCP11498 1178 aaKnown RBP12.86□□□□□ -0.35
UBR4-205ENST00000417040 GUCY1A2P33402 732 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 ANO4Q32M45 955 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 EPHA10Q5JZY3 1008 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 FAM83BQ5T0W9 1011 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 C1orf228Q6PIY5 440 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 RSRC2Q7L4I2 434 aaKnown RBP12.86□□□□□ -0.35
UBR4-205ENST00000417040 HACE1Q8IYU2 909 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 CCNYL1Q8N7R7 359 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 SH3RF3Q8TEJ3 882 aaPredicted RBP12.86□□□□□ -0.35
UBR4-205ENST00000417040 PARD3BQ8TEW8 1205 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 AS3MTQ9HBK9 375 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 DIS3Q9Y2L1 958 aaKnown RBP12.86□□□□□ -0.35
UBR4-205ENST00000417040 KRT17Q04695 432 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 CAPRIN1Q14444 709 aaKnown RBP12.86□□□□□ -0.35
UBR4-205ENST00000417040 FAM193BQ96PV7 902 aaPredicted RBP12.86□□□□□ -0.35
UBR4-205ENST00000417040 CCT8L2Q96SF2 557 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 ADAM22Q9P0K1 906 aa12.86□□□□□ -0.35
UBR4-205ENST00000417040 E2F8A0AVK6 867 aa12.85□□□□□ -0.35
UBR4-205ENST00000417040 ALDH1B1P30837 517 aa12.85□□□□□ -0.35
UBR4-205ENST00000417040 TXNRD1Q16881 649 aa12.85□□□□□ -0.35
UBR4-205ENST00000417040 C11orf70Q9BRQ4 267 aa12.85□□□□□ -0.35
UBR4-205ENST00000417040 LIMA1Q9UHB6 759 aaKnown RBP12.85□□□□□ -0.35
UBR4-205ENST00000417040 ARHGAP26Q9UNA1 814 aa12.85□□□□□ -0.35
UBR4-205ENST00000417040 ANO9A1A5B4 782 aa12.85□□□□□ -0.35
UBR4-205ENST00000417040 PIK3R2O00459 728 aa12.85□□□□□ -0.35
UBR4-205ENST00000417040 EIF3HO15372 352 aaKnown RBP eCLIP12.85□□□□□ -0.354e-12■■■■■ 34.8
UBR4-205ENST00000417040 GNL1P36915 607 aaPredicted RBP12.85□□□□□ -0.35
UBR4-205ENST00000417040 COPS2P61201 443 aa12.85□□□□□ -0.35
UBR4-205ENST00000417040 TFDP1Q14186 410 aa12.85□□□□□ -0.35
UBR4-205ENST00000417040 NBPF10Q6P3W6 841 aaKnown RBP12.85□□□□□ -0.35
UBR4-205ENST00000417040 PSPC1Q8WXF1 523 aaKnown RBP12.85□□□□□ -0.35
UBR4-205ENST00000417040 SLC7A3Q8WY07 619 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms