RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 PCDHA4Q9UN74 947 aa15.91■□□□□ 0.14
NCKIPSD-204ENST00000416649 MYH4Q9Y623 1939 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 USP17L12C9JPN9 530 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 USP17L21D6R901 530 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 ACTN1P12814 892 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 PPP1R2P41236 205 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 CNGA2Q16280 664 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 DZIP1Q86YF9 867 aaKnown RBP15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 CALML4Q96GE6 196 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 CDK5RAP3Q96JB5 506 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 TMEM237Q96Q45 408 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 MTA3Q9BTC8 594 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 TRIM7Q9C029 511 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 MYMKA6NI61 221 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 CREB1P16220 341 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 GPSM2P81274 684 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 ADAM9Q13443 819 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 ALKBH5Q6P6C2 394 aaKnown RBP15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 SPATA21Q7Z572 469 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 GBP7Q8N8V2 638 aaPredicted RBP15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 DRAXINQ8NBI3 349 aaPredicted RBP15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 ATP8B4Q8TF62 1192 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 PGM2Q96G03 612 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 EPB41L4BQ9H329 900 aa15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.9■□□□□ 0.14
NCKIPSD-204ENST00000416649 RASGRF2O14827 1237 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 TXKP42681 527 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 MRPS35P82673 323 aaKnown RBP15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 LRRC55Q6ZSA7 311 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 GALNT15Q8N3T1 639 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 RGL1Q9NZL6 768 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 FLT1P17948 1338 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 GRAPQ13588 217 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 MUM1Q2TAK8 710 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 GALNTL6Q49A17 601 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 C6orf118Q5T5N4 469 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 FAM47EQ6ZV65 393 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 ZNF571Q7Z3V5 609 aaPredicted RBP15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 FBXO33Q7Z6M2 555 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 VSIG1Q86XK7 387 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 TPCN2Q8NHX9 752 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 GRAPLQ8TC17 118 aaPredicted RBP15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 NUDCD1Q96RS6 583 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 ARL2BPQ9Y2Y0 163 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 COL4A3BPQ9Y5P4 624 aa15.89■□□□□ 0.13
NCKIPSD-204ENST00000416649 FLOT1O75955 427 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 KLC1Q07866 573 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 GJA10Q969M2 543 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 CUEDC2Q9H467 287 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 RNF8O76064 485 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 DDAH1O94760 285 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 AGTP01019 485 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 OR52Z1P0C646 297 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 GCLCP48506 637 aaPredicted RBP15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 LONRF1Q17RB8 773 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 TAOK1Q7L7X3 1001 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 LRRC57Q8N9N7 239 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 NSUN4Q96CB9 384 aaKnown RBP15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 EDEM3Q9BZQ6 932 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 ANKRD2Q9GZV1 360 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 KLHL14Q9P2G3 628 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 PCDHA6Q9UN73 950 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 PCDHA8Q9Y5H6 950 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 TMEM120BA0PK00 339 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 ALDH3A1P30838 453 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 RIOK1Q9BRS2 568 aaKnown RBP15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 ERP44Q9BS26 406 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 RNPEPL1Q9HAU8 725 aa15.88■□□□□ 0.13
NCKIPSD-204ENST00000416649 THSD7AQ9UPZ6 1657 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 TSNAXIP1Q2TAA8 658 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 ZNF449Q6P9G9 518 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 RAB3IPQ96QF0 476 aaPredicted RBP15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 PAIP2Q9BPZ3 127 aaKnown RBP15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 RXFP1Q9HBX9 757 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 ERVK-5Q9HDB9 667 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 PNPLA7Q6ZV29 1317 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 CES2O00748 559 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 NUDT17P0C025 328 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 CALB2P22676 271 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 TARSP26639 723 aaKnown RBP15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 LRRC63Q05C16 580 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 CUL3Q13618 768 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 INTS8Q75QN2 995 aaKnown RBP15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 ARHGAP22Q7Z5H3 698 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 COL23A1Q86Y22 540 aaPredicted RBP15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 GUF1Q8N442 669 aaKnown RBP15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 UCMAQ8WVF2 138 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 GORASP1Q9BQQ3 440 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 SAP30BPQ9UHR5 308 aaKnown RBP15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 NAGPAQ9UK23 515 aa15.87■□□□□ 0.13
NCKIPSD-204ENST00000416649 TSPY2A6NKD2 308 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 GH1P01241 217 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 USP17L8P0C7I0 530 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 ABCB4P21439 1286 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 PLS1Q14651 629 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 PIGOQ8TEQ8 1089 aa15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 U2AF1L4Q8WU68 220 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 ARHGEF2Q92974 986 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-204ENST00000416649 UTP4Q969X6 686 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms