RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 GJB4Q9NTQ9 266 aa19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 FAM50BQ9Y247 325 aa19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 KIAA1671Q9BY89 1806 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 IGKV6-21A0A0C4DH24 114 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 HOXA2O43364 376 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 MARCH6O60337 910 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 CCNT1O60563 726 aaKnown RBP19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 IL9P15248 144 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 HYAL1Q12794 435 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 CAMK1Q14012 370 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 ME3Q16798 604 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 CTC1Q2NKJ3 1217 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 FAM178BQ8IXR5 827 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 OXER1Q8TDS5 423 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 POF1BQ8WVV4 589 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 NLRP7Q8WX94 980 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 GTF3C6Q969F1 213 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 ZNF668Q96K58 619 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 JPH2Q9BR39 696 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 C1QTNF1Q9BXJ1 281 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 GCOM2Q9BZD3 368 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 TMEM117Q9H0C3 514 aa19.75■□□□□ 0.75
PDLIM2-208ENST00000416159 ATG2AQ2TAZ0 1938 aa19.74■□□□□ 0.75
PDLIM2-208ENST00000416159 EML1O00423 815 aa19.74■□□□□ 0.75
PDLIM2-208ENST00000416159 MAFO75444 373 aaPredicted RBP19.74■□□□□ 0.75
PDLIM2-208ENST00000416159 FDPSP14324 419 aaKnown RBP19.74■□□□□ 0.75
PDLIM2-208ENST00000416159 DNAJB1P25685 340 aa19.74■□□□□ 0.75
PDLIM2-208ENST00000416159 KRT2P35908 639 aa19.74■□□□□ 0.75
PDLIM2-208ENST00000416159 QARSP47897 775 aaKnown RBP19.74■□□□□ 0.75
PDLIM2-208ENST00000416159 UBE3AQ05086 875 aa19.74■□□□□ 0.75
PDLIM2-208ENST00000416159 CSPP1Q1MSJ5 1256 aa19.74■□□□□ 0.75
PDLIM2-208ENST00000416159 NECAB1Q8N987 351 aa19.74■□□□□ 0.75
PDLIM2-208ENST00000416159 TYW1Q9NV66 732 aaKnown RBP19.74■□□□□ 0.75
PDLIM2-208ENST00000416159 VAV3Q9UKW4 847 aa19.74■□□□□ 0.75
PDLIM2-208ENST00000416159 TMEM150BA6NC51 233 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 DTNBO60941 627 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 CSPG5O95196 566 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 BAG4O95429 457 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 P4HBP07237 508 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 LTBRP36941 435 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 NEK4P51957 841 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 DRP2Q13474 957 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 EPHA7Q15375 998 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 ANO5Q75V66 913 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 ECHDC2Q86YB7 292 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 EXOC8Q8IYI6 725 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 HAS1Q92839 578 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 SH2D3AQ9BRG2 576 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 INO80BQ9C086 356 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 IGFLR1Q9H665 355 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 PPME1Q9Y570 386 aa19.73■□□□□ 0.75
PDLIM2-208ENST00000416159 LARGE1O95461 756 aa19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 EOMESO95936 686 aa19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 FGFR1P11362 822 aa19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 LAG3P18627 525 aa19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 EARS2Q5JPH6 523 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 ZNF410Q86VK4 478 aa19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 SLFN12Q8IYM2 578 aa19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 GJD3Q8N144 294 aa19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 COLGALT1Q8NBJ5 622 aa19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 CWH43Q9H720 699 aa19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 CYP26B1Q9NR63 512 aa19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 CHST12Q9NRB3 414 aa19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 DACT1Q9NYF0 836 aa19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 SUCLA2Q9P2R7 463 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-208ENST00000416159 A0A087WZ62 844 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 A0A0U1RQF3 1178 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 FGFR4P22455 802 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 IRS1P35568 1242 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 NR5A1Q13285 461 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 ADAM15Q13444 863 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 POTEDQ86YR6 584 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 C4orf19Q8IY42 314 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 THNSL1Q8IYQ7 743 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 ABI1Q8IZP0 508 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 NSUN7Q8NE18 718 aaKnown RBP19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 CASD1Q96PB1 797 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 FDXACB1Q9BRP7 624 aaPredicted RBP19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 EPHX3Q9H6B9 360 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 CD320Q9NPF0 282 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 RNF19AQ9NV58 838 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 BDP1A6H8Y1 2624 aa19.71■□□□□ 0.75
PDLIM2-208ENST00000416159 XIRP2A4UGR9 3374 aa19.7■□□□□ 0.74
PDLIM2-208ENST00000416159 FGF18O76093 207 aa19.7■□□□□ 0.74
PDLIM2-208ENST00000416159 COL9A1P20849 921 aa19.7■□□□□ 0.74
PDLIM2-208ENST00000416159 SFPQP23246 707 aaKnown RBP eCLIP19.7■□□□□ 0.74
PDLIM2-208ENST00000416159 GTF2F1P35269 517 aaKnown RBP eCLIP19.7■□□□□ 0.74
PDLIM2-208ENST00000416159 PLA2G4FQ68DD2 849 aa19.7■□□□□ 0.74
PDLIM2-208ENST00000416159 OTUD6AQ7L8S5 288 aa19.7■□□□□ 0.74
PDLIM2-208ENST00000416159 RHPN2Q8IUC4 686 aa19.7■□□□□ 0.74
PDLIM2-208ENST00000416159 MICAL1Q8TDZ2 1067 aa19.7■□□□□ 0.74
PDLIM2-208ENST00000416159 TNFRSF25Q93038 417 aa19.7■□□□□ 0.74
PDLIM2-208ENST00000416159 CEP170P1Q96L14 293 aa19.7■□□□□ 0.74
PDLIM2-208ENST00000416159 PRKAG3Q9UGI9 489 aa19.7■□□□□ 0.74
PDLIM2-208ENST00000416159 CSDE1O75534 798 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 CENPBP07199 599 aaPredicted RBP19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 SSTR3P32745 418 aaPredicted RBP19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 NPEPPSP55786 919 aa19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 DLX2Q07687 328 aaPredicted RBP19.69■□□□□ 0.74
PDLIM2-208ENST00000416159 TRIM29Q14134 588 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms