RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 RNF219Q5W0B1 726 aaPredicted RBP11.4□□□□□ -0.58
COL12A1-203ENST00000416123 BEST2Q8NFU1 509 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 PSPC1Q8WXF1 523 aaKnown RBP11.4□□□□□ -0.58
COL12A1-203ENST00000416123 PBKQ96KB5 322 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 RGL1Q9NZL6 768 aa11.4□□□□□ -0.58
COL12A1-203ENST00000416123 SKIV2LQ15477 1246 aaKnown RBP11.4□□□□□ -0.59
COL12A1-203ENST00000416123 SPOPLQ6IQ16 392 aa11.4□□□□□ -0.59
COL12A1-203ENST00000416123 PDZD8Q8NEN9 1154 aa11.4□□□□□ -0.59
COL12A1-203ENST00000416123 CFAP61Q8NHU2 1237 aa11.4□□□□□ -0.59
COL12A1-203ENST00000416123 FAM114A2Q9NRY5 505 aa11.4□□□□□ -0.59
COL12A1-203ENST00000416123 GINM1Q9NU53 330 aa11.4□□□□□ -0.59
COL12A1-203ENST00000416123 ADAM22Q9P0K1 906 aa11.4□□□□□ -0.59
COL12A1-203ENST00000416123 TLK1Q9UKI8 766 aa11.4□□□□□ -0.59
COL12A1-203ENST00000416123 SETBP1Q9Y6X0 1596 aa11.4□□□□□ -0.59
COL12A1-203ENST00000416123 PPFIA4O75335 1185 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 GPC4O75487 556 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 IL9RQ01113 521 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 LMBRD2Q68DH5 695 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-203ENST00000416123 RNF217Q8TC41 542 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 LRGUKQ96M69 825 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 FBXO40Q9UH90 709 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 RIMBP3CA6NJZ7 1639 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 RIMBP3BA6NNM3 1639 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 RIMBP3Q9UFD9 1639 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 BBS9Q3SYG4 887 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 TBC1D22BQ9NU19 505 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 UBE4BO95155 1302 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 LCP1P13796 627 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 DHX9Q08211 1270 aaKnown RBP11.39□□□□□ -0.59
COL12A1-203ENST00000416123 ZNF449Q6P9G9 518 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 MCPH1Q8NEM0 835 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 SPDL1Q96EA4 605 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 PIDD1Q9HB75 910 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 OPHN1O60890 802 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 TSPY1Q01534 308 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 DBN1Q16643 649 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 ANGEL2Q5VTE6 544 aaKnown RBP11.39□□□□□ -0.59
COL12A1-203ENST00000416123 LDHDQ86WU2 507 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 KIF12Q96FN5 646 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 THOC1Q96FV9 657 aaKnown RBP11.39□□□□□ -0.59
COL12A1-203ENST00000416123 SPZ1Q9BXG8 430 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 PCSK1NQ9UHG2 260 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 BAG5Q9UL15 447 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 HOXD10P28358 340 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 ZNF157P51786 506 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-203ENST00000416123 MB21D2Q8IYB1 491 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-203ENST00000416123 XXYLT1Q8NBI6 393 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 MIPOL1Q8TD10 442 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 PSMD14O00487 310 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 TNFAIP2Q03169 654 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 KNOP1Q1ED39 458 aaKnown RBP11.39□□□□□ -0.59
COL12A1-203ENST00000416123 ALKBH5Q6P6C2 394 aaKnown RBP11.39□□□□□ -0.59
COL12A1-203ENST00000416123 ATG9AQ7Z3C6 839 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 PYROXD1Q8WU10 500 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 NSUN4Q96CB9 384 aaKnown RBP11.39□□□□□ -0.59
COL12A1-203ENST00000416123 JRKLQ9Y4A0 524 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 FLT1P17948 1338 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 EXOC1LA0A1B0GW35 172 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 M0QYV0 167 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 NCF2P19878 526 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-203ENST00000416123 YWHABP31946 246 aaKnown RBP11.39□□□□□ -0.59
COL12A1-203ENST00000416123 COPB2P35606 906 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 MRPL4Q9BYD3 311 aaKnown RBP11.39□□□□□ -0.59
COL12A1-203ENST00000416123 NEXMIFQ5QGS0 1516 aa11.39□□□□□ -0.59
COL12A1-203ENST00000416123 ACCSLQ4AC99 568 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 PRR5LQ6MZQ0 368 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 GBP7Q8N8V2 638 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-203ENST00000416123 FSD1LQ9BXM9 530 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 CNOT8Q9UFF9 292 aaKnown RBP11.38□□□□□ -0.59
COL12A1-203ENST00000416123 TTC7AQ9ULT0 858 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-203ENST00000416123 PREX1Q8TCU6 1659 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 UPP2O95045 317 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 FGGP02679 453 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 GNA15P30679 374 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 CCT5P48643 541 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 AP1B1Q10567 949 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 FAM167AQ96KS9 214 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 HIP1RO75146 1068 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 TJP3O95049 919 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL12A1-203ENST00000416123 FMO2Q99518 471 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 TOPORSQ9NS56 1045 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-203ENST00000416123 KLHL8Q9P2G9 620 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-203ENST00000416123 STK36Q9NRP7 1315 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 FASTKD5Q7L8L6 764 aaKnown RBP11.38□□□□□ -0.59
COL12A1-203ENST00000416123 KIF28PB7ZC32 967 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 SART1O43290 800 aaKnown RBP11.38□□□□□ -0.59
COL12A1-203ENST00000416123 MT-ND3P03897 115 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 CERKQ8TCT0 537 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 NUP85Q9BW27 656 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 JCADQ9P266 1359 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 LRRC53A6NM62 1247 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 IFT43Q96FT9 208 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 NUDCD1Q96RS6 583 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 JPH1Q9HDC5 661 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-203ENST00000416123 RBAKQ9NYW8 714 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-203ENST00000416123 ZNRF3Q9ULT6 936 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 HPCAL4Q9UM19 191 aa11.38□□□□□ -0.59
COL12A1-203ENST00000416123 P4HBP07237 508 aaKnown RBP11.37□□□□□ -0.59
COL12A1-203ENST00000416123 CTSHP09668 335 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms